FFCP PHASE1:Hg19::chrX:105969923..105969947,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:105969923..105969947,+ to FFCP PHASE1:Hg19::chrX:105969923..105969947,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79589 | |EntrezGene=79589 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21153 | |HGNC=21153 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TEB7 | |UniProt=Q8TEB7 | ||
|association_with_transcript=29bp_to_ENST00000255499,NM_194463,uc004eml.2_5end | |||
|cluster_id=chrX:105969923..105969947,+ | |||
|coexpression_cluster_id=C4841 | |||
|description=CAGE_peak_1_at_RNF128_5end | |||
|id=chrX:105969923..105969947,+ | |||
|ontology_enrichment_celltype=CL:0000223!5.12e-12!59;CL:0002076!2.40e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.76e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,2.06e-14,58;CL:0002076,3.42e-09,42 | |||
|ontology_enrichment_development_v019=CL:0000223;7.59e-08;58!UBERON:0003104;8.99e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;6.09e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.12e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000481!3.06e-16!347;UBERON:0000475!4.11e-16!365;UBERON:0007023!1.70e-14!115;UBERON:0004119!1.45e-12!169;UBERON:0000925!1.45e-12!169;UBERON:0006595!1.45e-12!169;UBERON:0001049!3.65e-11!57;UBERON:0005068!3.65e-11!57;UBERON:0006241!3.65e-11!57;UBERON:0007135!3.65e-11!57;UBERON:0000924!5.08e-11!173;UBERON:0006601!5.08e-11!173;UBERON:0005743!5.38e-11!86;UBERON:0004121!5.58e-11!169;UBERON:0000483!1.11e-10!309;UBERON:0001017!1.17e-10!82;UBERON:0001007!1.32e-10!155;UBERON:0001555!1.32e-10!155;UBERON:0007026!1.32e-10!155;UBERON:0000073!2.96e-10!94;UBERON:0001016!2.96e-10!94;UBERON:0004921!3.06e-10!129;UBERON:0004185!3.06e-10!129;UBERON:0000153!4.03e-10!129;UBERON:0007811!4.03e-10!129;UBERON:0000468!4.15e-10!659;UBERON:0000119!4.41e-10!312;UBERON:0000922!6.54e-10!612;UBERON:0003080!9.44e-10!42;UBERON:0000033!1.01e-09!123;UBERON:0000467!1.17e-09!625;UBERON:0000923!1.34e-09!604;UBERON:0005291!1.34e-09!604;UBERON:0006598!1.34e-09!604;UBERON:0002532!1.34e-09!604;UBERON:0002780!1.35e-09!41;UBERON:0001890!1.35e-09!41;UBERON:0006240!1.35e-09!41;UBERON:0000480!1.73e-09!626;UBERON:0002050!1.97e-09!605;UBERON:0005423!1.97e-09!605;UBERON:0000062!2.52e-09!511;UBERON:0002616!2.67e-09!59;UBERON:0005911!4.24e-09!82;UBERON:0004111!4.60e-09!241;UBERON:0002020!9.90e-09!34;UBERON:0003528!9.90e-09!34;UBERON:0001893!1.02e-08!34;UBERON:0000955!1.28e-08!69;UBERON:0006238!1.28e-08!69;UBERON:0001869!1.30e-08!32;UBERON:0002530!1.92e-08!59;UBERON:0002791!2.38e-08!33;UBERON:0003929!2.47e-08!54;UBERON:0003075!2.70e-08!86;UBERON:0007284!2.70e-08!86;UBERON:0002346!2.93e-08!90;UBERON:0000025!5.52e-08!194;UBERON:0003056!1.88e-07!61;UBERON:0002365!3.25e-07!31;UBERON:0002330!3.25e-07!31;UBERON:0000077!3.86e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.68e-10;33!UBERON:0001869;2.21e-08;32!UBERON:0005409;6.24e-08;22!UBERON:0003528;6.69e-08;34!UBERON:0002020;6.69e-08;34!UBERON:0001893;1.01e-07;34!UBERON:0002791;1.03e-07;32!UBERON:0002365;1.14e-07;31!UBERON:0002330;1.14e-07;31!UBERON:0000160;2.96e-07;17!UBERON:0002780;6.25e-07;41!UBERON:0001890;6.25e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.80e-17,223;UBERON:0007023,2.00e-14,114;UBERON:0004119,8.93e-12,160;UBERON:0000925,8.93e-12,160;UBERON:0006595,8.93e-12,160;UBERON:0001049,2.14e-10,56;UBERON:0005068,2.14e-10,56;UBERON:0006241,2.14e-10,56;UBERON:0007135,2.14e-10,56;UBERON:0004921,3.83e-10,118;UBERON:0001007,1.03e-09,145;UBERON:0001555,1.03e-09,145;UBERON:0007026,1.03e-09,145;UBERON:0000073,1.05e-09,53;UBERON:0002616,1.05e-09,53;UBERON:0004121,3.21e-09,171;UBERON:0000924,3.21e-09,171;UBERON:0006601,3.21e-09,171;UBERON:0001869,5.97e-09,32;UBERON:0002780,6.00e-09,41;UBERON:0001890,6.00e-09,41;UBERON:0003080,6.00e-09,41;UBERON:0006240,6.00e-09,41;UBERON:0001017,7.08e-09,81;UBERON:0010371,1.16e-08,104;UBERON:0003528,1.26e-08,34;UBERON:0002020,1.26e-08,34;UBERON:0001893,1.30e-08,34;UBERON:0001016,1.97e-08,89;UBERON:0004111,3.68e-08,240;UBERON:0005911,3.83e-08,82;UBERON:0002791,5.21e-08,32;UBERON:0003075,9.70e-08,82;UBERON:0007284,9.70e-08,82;UBERON:0002365,9.87e-08,31;UBERON:0002330,9.87e-08,31;UBERON:0000955,1.19e-07,68;UBERON:0006238,1.19e-07,68;UBERON:0002346,1.25e-07,86;UBERON:0005423,1.46e-07,581;UBERON:0003929,1.71e-07,54;UBERON:0000922,2.31e-07,592;UBERON:0000160,4.14e-07,17;UBERON:0003056,4.26e-07,61;UBERON:0002530,5.24e-07,59;UBERON:0000483,6.05e-07,306;UBERON:0000025,7.06e-07,192 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.422863212287913,0,0,0,2.53299878168311,0.631719873426831,0,0.737201809504527,0,0.218441372130172,0.527533956456907,0,0,0.672325146451775,0,0.730310090387373,1.46379839637152,0.123121058076788,0,0,2.0036519099174,3.83248390204076,0.627713197974014,0,0,0,0,0,0,3.67768489791571,1.204823675113,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,1.41802225746102,1.33037638477538,0.702678285545008,6.81091192588106,1.45718115317017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0.496971951695318,1.51956613997496,6.48804985984772,8.60509862246441,7.09336764396714,2.80338800071154,0,0.49333509683432,0,0.269421344139376,0,0.151357427644931,0,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0.907457465280168,0.179389635688862,0,0.423863802319124,1.20036438433761,0.309157587715317,0,0,2.86919764810153,2.24105111870757,0,0.0920498986422993,0.484938170456436,2.4850671476163,0.705264687593482,0.169560592310488,2.89891279744945,1.90922284413584,4.87567812161307,0.243947412259191,0,1.04574548582567,1.14027160516907,1.00928340350251,0.36497735907583,0,0,0,0.928735856063958,1.44375896333917,0,0.168584690078102,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0.8231480226628,0,79.8556719377534,56.0211513506247,51.9895117879636,0,39.2333118952532,0.171567810298526,7.13376855156066,0,7.13755704122579,1.94435734832912,0,0,1.44331342025273,2.31860809950154,0.234817388471643,0,0,0,0,0,0.492434012174795,3.7440682422278,2.37809859661965,1.87467667973554,10.4148919483293,1.41775097242386,3.58234090811393,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0.432359860250884,0.12624243342638,0.444485260045183,3.05590740446622,2.34434894420094,1.71072446022705,0.925447434329912,6.60754727256618,3.14409075893636,0,0,0,1.42198887333556,0,0.845302752556,0,0,0,1.41849132023278,0.266422179016099,0,0,0,2.28015329005615,0,0,89.2260556096375,51.4204740574174,63.082957435878,1.2162378064119,0,0,0,0,11.4109524032575,0.579125226670317,1.43833425785268,1.61154866915906,0.112085143993527,0.197030760201927,0,0,35.0650581427,6.50699269288109,0.773288812777695,1.84267891867784,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0,0,0.601892199455438,0,1.03473071292505,0.664225598535437,1.65932251687533,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,1.68808170616869,0,0.384417447767103,0.511707249066704,0.482561763430822,0,4.31787142647436,3.9063579568888,4.84550220481474,1.55776328755086,2.44041794765914,25.1387655150574,15.8400111539595,17.9557928424998,0.114814448164607,0,0.524497659837696,0,1.46329140498388,0,1.46139224653261,1.79437769117889,0,0,0,0,0,0.501689773854853,2.54876273045038,2.49322802678617,0.223874754722178,0,0,1.28225062558195,3.60816110269676,4.22991913063594,44.8228400667592,0,0,1.14853107599234,1.95018073810956,0,0.193341436584244,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0.255679882248303,0.178064071293475,13.7186479749612,5.57351195358808,4.08360679982669,11.228513674966,1.39453664789186,17.3146790756852,2.0911118104818,0.308033580176089,2.12922412126809,3.47973196830029,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,1.2130948894399,0,0,0,1.21856744815642,0,0,0.424216295861138,10.1707304958219,5.51365343546124,3.98063385144732,0.438450885253763,0,0.655894752046633,0.811641507850816,0.6196469961995,0.563391205064483,1.00387946542836,0,0.7133421029625,0.709522128141196,0,0,0,0,4.8111056362756,2.68120910214315,1.08890984861323,43.3061483573184,12.9151611801369,11.7930032967338,7.09488245658681,34.6882334312509,0,0,0,0,0,0,0,0,0,0,4.41072388765857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.1123729453179,2.19762268907841,0,0,9.09235669780522,2.86493381685228,2.07875276582847,4.30024982938925,5.96488588659779,2.39138007897872,9.461239926947,0,0,0.19924798825107,4.14425873296722,39.3015086652671,54.9182825036571,0,0.622079175323615,10.8740704888265,0.179021174675609,0,1.7755813014648,0,0,3.87733098438087,1.85536196323703,0,0,16.967239999262,1.44999915086959,33.4552737959369,0,0.472775363535873,2.06846023944879,4.95727842751532,0,1.77148277162768,5.54743617676877,3.05163472634166,0.774054819518572,1.77328571372128,4.16832254592548,0,1.39423744278603,0.923403102045565,0,50.2629311565971,37.2494224300554,6.62748968724249,3.82801391678303,5.12946523050429,4.79731298416771,0,0,0,0,0,0,0,0,0.421996129056054,0,26.5743774295809,25.3174708498247,13.9336670350991,32.9946715597455,39.105929275752,0,0,0,1.41542379259422,0,2.81117334870407,0,2.34797542718508,0,0,32.6674933331392,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| ||
|short_description=p1@RNF128 | |||
}} | }} |
Latest revision as of 22:12, 18 September 2015
Short description: | p1@RNF128 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNF128_5end |
Coexpression cluster: | C4841_Mesothelial_gastrointestinal_Hepatocyte_oral_small_signet_liver |
Association with transcript: | 29bp_to_ENST00000255499, NM_194463, uc004eml.2_5end |
EntrezGene: | RNF128 |
HGNC: | 21153 |
UniProt: | Q8TEB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 2.06e-14 | 58 |
endo-epithelial cell | 3.42e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.12e-07 | 14 |