FFCP PHASE1:Hg19::chrX:106163626..106163638,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2041 | |||
|TSSclassifier=strong | |||
|UniProt=P57739 | |||
|association_with_transcript=0bp_to_ENST00000336803,uc004emt.1_5end | |||
|cluster_id=chrX:106163626..106163638,+ | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_2_at_CLDN2_5end | |||
|id=chrX:106163626..106163638,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.17e-27!7;CL:0000126!2.17e-27!7;CL:0000127!2.17e-27!7;CL:0002453!2.17e-27!7;CL:0000064!9.78e-14!3;CL:0005012!9.78e-14!3;CL:0000067!9.78e-14!3;CL:0002304!9.78e-14!3;CL:0002605!3.12e-13!3;CL:0002603!1.28e-12!3;CL:0000243!1.06e-10!15;CL:0000125!1.06e-10!15;CL:0000030!1.06e-10!15;CL:0000339!1.06e-10!15;CL:0000306!5.09e-10!4;CL:0002222!5.09e-10!4;CL:0002224!5.09e-10!4;CL:0000095!1.80e-09!17;CL:0000123!1.80e-09!17;CL:0002319!3.01e-08!25;CL:0000133!4.76e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000064;9.10e-30;3!CL:0000067;9.10e-30;3!CL:0005012;9.10e-30;3!CL:0002304;9.10e-30;3!CL:0002605;1.01e-28;3!CL:0000128;1.38e-21;7!CL:0000126;1.38e-21;7!CL:0000127;1.38e-21;7!CL:0000306;1.50e-21;4!CL:0002222;1.50e-21;4!CL:0002224;1.50e-21;4!CL:0000075;2.73e-12;27!CL:0000342;3.76e-11;1!CL:0002565;3.76e-11;1!CL:0000243;4.97e-09;15!CL:0000125;4.97e-09;15!CL:0000095;4.26e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.00e-29,3;CL:0000067,1.00e-29,3;CL:0005012,1.00e-29,3;CL:0002304,1.00e-29,3;CL:0002605,1.48e-28,3;CL:0000306,1.45e-21,4;CL:0002222,1.45e-21,4;CL:0002224,1.45e-21,4;CL:0000128,1.63e-21,7;CL:0000126,1.63e-21,7;CL:0000127,1.63e-21,7;CL:0002453,1.63e-21,7;CL:0000075,2.75e-12,27;CL:0000342,3.76e-11,1;CL:0002565,3.76e-11,1;CL:0000243,5.30e-09,15;CL:0000125,5.30e-09,15;CL:0000030,5.30e-09,15;CL:0000339,5.30e-09,15;CL:0000095,4.51e-08,17;CL:0000123,4.51e-08,17;CL:0000133,6.55e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000339;4.97e-09;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!3.22e-30!86;UBERON:0007284!3.22e-30!86;UBERON:0002346!1.39e-28!90;UBERON:0005743!1.97e-24!86;UBERON:0003056!6.21e-24!61;UBERON:0000033!7.70e-24!123;UBERON:0007625!1.59e-23!11;UBERON:0000153!2.10e-22!129;UBERON:0007811!2.10e-22!129;UBERON:0002616!6.08e-22!59;UBERON:0000955!7.70e-22!69;UBERON:0006238!7.70e-22!69;UBERON:0000073!1.43e-21!94;UBERON:0001016!1.43e-21!94;UBERON:0001017!1.63e-21!82;UBERON:0000970!3.19e-19!20;UBERON:0001049!3.04e-18!57;UBERON:0005068!3.04e-18!57;UBERON:0006241!3.04e-18!57;UBERON:0007135!3.04e-18!57;UBERON:0002104!3.30e-18!21;UBERON:0004121!6.34e-18!169;UBERON:0000488!9.39e-18!4;UBERON:0000924!2.44e-17!173;UBERON:0006601!2.44e-17!173;UBERON:0000019!1.61e-16!19;UBERON:0000047!1.61e-16!19;UBERON:0004088!1.61e-16!19;UBERON:0003072!1.61e-16!19;UBERON:0003071!1.61e-16!19;UBERON:0004128!1.61e-16!19;UBERON:0000020!1.92e-16!23;UBERON:0001032!1.13e-15!24;UBERON:0004456!1.13e-15!24;UBERON:0001456!8.83e-15!21;UBERON:0001801!4.47e-14!14;UBERON:0001896!7.61e-14!3;UBERON:0005290!7.61e-14!3;UBERON:0010096!7.61e-14!3;UBERON:0001778!9.78e-14!3;UBERON:0001775!9.78e-14!3;UBERON:0002200!3.49e-13!11;UBERON:0006876!3.49e-13!11;UBERON:0004733!5.20e-12!12;UBERON:0002028!5.20e-12!12;UBERON:0007277!5.20e-12!12;UBERON:0002203!7.54e-12!6;UBERON:0001768!7.54e-12!6;UBERON:0002780!3.96e-11!41;UBERON:0001890!3.96e-11!41;UBERON:0006240!3.96e-11!41;UBERON:0004732!4.93e-11!13;UBERON:0003080!8.22e-11!42;UBERON:0005085!3.16e-10!29;UBERON:0010077!5.09e-10!4;UBERON:0005389!5.09e-10!4;UBERON:0000484!5.09e-10!4;UBERON:0002546!5.09e-10!4;UBERON:0000965!5.09e-10!4;UBERON:0001803!5.09e-10!4;UBERON:0003073!5.09e-10!4;UBERON:0005426!5.09e-10!4;UBERON:0003076!1.81e-09!15;UBERON:0003057!1.81e-09!15;UBERON:0001905!4.66e-09!2;UBERON:0002757!4.66e-09!2;UBERON:0010134!4.66e-09!2;UBERON:0002784!4.66e-09!2;UBERON:0005408!4.66e-09!2;UBERON:0001899!4.66e-09!2;UBERON:0002791!5.39e-08!33;UBERON:0000119!8.95e-08!312;UBERON:0001893!1.01e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.04e-41;11!UBERON:0000488;4.08e-39;4!UBERON:0001801;1.18e-32;14!UBERON:0000019;3.81e-31;19!UBERON:0000047;3.81e-31;19!UBERON:0004088;3.81e-31;19!UBERON:0010230;3.81e-31;19!UBERON:0001896;5.87e-30;3!UBERON:0005290;5.87e-30;3!UBERON:0001778;9.10e-30;3!UBERON:0001775;9.10e-30;3!UBERON:0000970;1.52e-29;20!UBERON:0002104;4.25e-28;21!UBERON:0001456;4.25e-28;21!UBERON:0002203;3.34e-26;6!UBERON:0001768;3.34e-26;6!UBERON:0002200;3.34e-26;6!UBERON:0000020;1.40e-25;23!UBERON:0001032;1.78e-24;24!UBERON:0004456;1.78e-24;24!UBERON:0010077;1.50e-21;4!UBERON:0005389;1.50e-21;4!UBERON:0000484;1.50e-21;4!UBERON:0000965;1.50e-21;4!UBERON:0001803;1.50e-21;4!UBERON:0002298;2.65e-15;6!UBERON:0006876;2.03e-14;11!UBERON:0010371;3.88e-14;31!UBERON:0004733;4.17e-13;12!UBERON:0002028;4.17e-13;12!UBERON:0004732;4.10e-12;13!UBERON:0000073;1.65e-11;53!UBERON:0002616;1.65e-11;53!UBERON:0002336;3.08e-11;1!UBERON:0011215;3.08e-11;1!UBERON:0001018;3.08e-11;1!UBERON:0002473;3.08e-11;1!UBERON:0005340;3.08e-11;1!UBERON:0003544;3.08e-11;1!UBERON:0005970;3.08e-11;1!UBERON:0002316;3.08e-11;1!UBERON:0001020;3.08e-11;1!UBERON:0002437;3.08e-11;1!UBERON:0002506;3.76e-11;1!UBERON:0001769;3.76e-11;1!UBERON:0001893;5.08e-09;34!UBERON:0000956;6.63e-09;25!UBERON:0000203;6.63e-09;25!UBERON:0001444;1.94e-08;48!UBERON:0002780;4.72e-07;41!UBERON:0001890;4.72e-07;41!UBERON:0002791;6.09e-07;32!UBERON:0001869;6.09e-07;32!UBERON:0000033;6.88e-07;50!UBERON:0003528;9.52e-07;34!UBERON:0002020;9.52e-07;34 | |||
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|short_description=p2@CLDN2 | |||
}} |
Latest revision as of 22:18, 18 September 2015
Short description: | p2@CLDN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLDN2_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | 0bp_to_ENST00000336803, uc004emt.1_5end |
EntrezGene: | CLDN2 |
HGNC: | 2041 |
UniProt: | P57739 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.00e-29 | 3 |
ciliated epithelial cell | 1.00e-29 | 3 |
multi-ciliated epithelial cell | 1.00e-29 | 3 |
non-pigmented ciliary epithelial cell | 1.00e-29 | 3 |
astrocyte of the cerebral cortex | 1.48e-28 | 3 |
crystallin accumulating cell | 1.45e-21 | 4 |
vertebrate lens cell | 1.45e-21 | 4 |
lens epithelial cell | 1.45e-21 | 4 |
oligodendrocyte | 1.63e-21 | 7 |
macroglial cell | 1.63e-21 | 7 |
astrocyte | 1.63e-21 | 7 |
oligodendrocyte precursor cell | 1.63e-21 | 7 |
columnar/cuboidal epithelial cell | 2.75e-12 | 27 |
pigment cell (sensu Vertebrata) | 3.76e-11 | 1 |
iris pigment epithelial cell | 3.76e-11 | 1 |
glial cell (sensu Vertebrata) | 5.30e-09 | 15 |
glial cell | 5.30e-09 | 15 |
glioblast | 5.30e-09 | 15 |
glioblast (sensu Vertebrata) | 5.30e-09 | 15 |
neuron associated cell | 4.51e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 4.51e-08 | 17 |
neurectodermal cell | 6.55e-07 | 59 |