FFCP PHASE1:Hg19::chr4:86396549..86396593,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:86396549..86396593,+
|short_description=p3@ARHGAP24
|description=CAGE_peak_3_at_ARHGAP24_5end
|association_with_transcript=-2bp_to_ENST00000506421_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83478 | |EntrezGene=83478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25361 | |HGNC=25361 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000506421_5end | |||
|cluster_id=chr4:86396549..86396593,+ | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_3_at_ARHGAP24_5end | |||
|id=chr4:86396549..86396593,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.13e-30!140;CL:0002087!1.31e-30!119;CL:0002031!1.39e-26!124;CL:0002009!1.27e-25!65;CL:0002057!1.08e-24!42;CL:0002194!1.73e-24!63;CL:0000576!1.73e-24!63;CL:0000040!1.73e-24!63;CL:0000559!1.73e-24!63;CL:0000766!3.25e-23!76;CL:0000037!9.94e-23!172;CL:0000566!9.94e-23!172;CL:0000557!1.18e-22!71;CL:0000988!6.29e-22!182;CL:0000860!1.90e-21!45;CL:0000839!7.67e-21!70;CL:0002032!1.24e-20!165;CL:0000837!1.24e-20!165;CL:0000763!4.97e-14!112;CL:0000049!4.97e-14!112;CL:0000945!3.24e-13!24;CL:0000826!3.24e-13!24;CL:0000236!1.24e-09!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.14e-25;33!CL:0002057;7.14e-25;33!CL:0000473;6.43e-24;39!CL:0000234;6.43e-24;39!CL:0000576;4.54e-22;48!CL:0000945;7.86e-19;24!CL:0000766;5.10e-15;69!CL:0002087;3.19e-13;104!CL:0000236;6.19e-13;13!CL:0000738;6.11e-09;136!CL:0000763;9.05e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,2.27e-39,115;CL:0000738,7.25e-39,136;CL:0000473,4.70e-38,48;CL:0000234,4.70e-38,48;CL:0002009,2.26e-35,61;CL:0000860,2.42e-34,42;CL:0002057,2.42e-34,42;CL:0002194,9.43e-34,59;CL:0000576,9.43e-34,59;CL:0000040,9.43e-34,59;CL:0000559,9.43e-34,59;CL:0002031,1.40e-33,120;CL:0000766,1.76e-30,72;CL:0000557,2.45e-30,67;CL:0000839,4.67e-28,66;CL:0000988,1.80e-27,177;CL:0000037,1.84e-27,168;CL:0002032,7.70e-25,161;CL:0000837,7.70e-25,161;CL:0000945,7.45e-19,24;CL:0000826,7.45e-19,24;CL:0000763,1.80e-17,108;CL:0000049,1.80e-17,108;CL:0000236,2.04e-13,14;CL:0002393,1.83e-08,9;CL:0002397,1.83e-08,9;CL:0000542,2.90e-07,53;CL:0000051,2.90e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.48e-35!115;UBERON:0002193!1.28e-28!112;UBERON:0002390!8.60e-28!102;UBERON:0003061!8.60e-28!102;UBERON:0002371!9.82e-20!80;UBERON:0001474!2.66e-16!86;UBERON:0002405!2.19e-15!115;UBERON:0001049!1.00e-13!57;UBERON:0005068!1.00e-13!57;UBERON:0006241!1.00e-13!57;UBERON:0007135!1.00e-13!57;UBERON:0004765!5.97e-13!101;UBERON:0001434!5.97e-13!101;UBERON:0002616!7.98e-11!59;UBERON:0003080!2.98e-10!42;UBERON:0002780!5.78e-10!41;UBERON:0001890!5.78e-10!41;UBERON:0006240!5.78e-10!41;UBERON:0000178!7.60e-10!15;UBERON:0000179!7.60e-10!15;UBERON:0000463!7.60e-10!15;UBERON:0001893!1.81e-08!34;UBERON:0002020!1.82e-08!34;UBERON:0003528!1.82e-08!34;UBERON:0000955!2.55e-08!69;UBERON:0006238!2.55e-08!69;UBERON:0002204!3.94e-08!167;UBERON:0002791!4.01e-08!33;UBERON:0003075!6.23e-08!86;UBERON:0007284!6.23e-08!86;UBERON:0001017!1.28e-07!82;UBERON:0001869!1.82e-07!32;UBERON:0005743!5.58e-07!86;UBERON:0003081!7.24e-07!216;UBERON:0002346!9.11e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.68e-13;15!UBERON:0000179;2.68e-13;15!UBERON:0000463;2.68e-13;15!UBERON:0007023;1.78e-11;114!UBERON:0000073;2.47e-09;53!UBERON:0002616;2.47e-09;53!UBERON:0002780;2.76e-09;41!UBERON:0001890;2.76e-09;41!UBERON:0001893;4.48e-09;34!UBERON:0003528;9.43e-09;34!UBERON:0002020;9.43e-09;34!UBERON:0002791;1.25e-08;32!UBERON:0001869;3.03e-08;32!UBERON:0000125;1.70e-07;9!UBERON:0002308;1.70e-07;9!UBERON:0002390;1.92e-07;32!UBERON:0002420;2.35e-07;9!UBERON:0007245;2.35e-07;9!UBERON:0010009;2.35e-07;9!UBERON:0010011;2.35e-07;9!UBERON:0000454;2.35e-07;9!UBERON:0002619;4.36e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.68e-40,114;UBERON:0002390,8.36e-38,98;UBERON:0003061,8.36e-38,98;UBERON:0002193,9.48e-37,108;UBERON:0002405,9.27e-26,93;UBERON:0002371,1.40e-25,76;UBERON:0001474,3.07e-22,82;UBERON:0004765,1.54e-18,90;UBERON:0001049,2.01e-17,56;UBERON:0005068,2.01e-17,56;UBERON:0006241,2.01e-17,56;UBERON:0007135,2.01e-17,56;UBERON:0001434,1.18e-15,100;UBERON:0000073,1.57e-15,53;UBERON:0002616,1.57e-15,53;UBERON:0003081,7.46e-14,203;UBERON:0000178,2.76e-13,15;UBERON:0000179,2.76e-13,15;UBERON:0000463,2.76e-13,15;UBERON:0002780,2.18e-12,41;UBERON:0001890,2.18e-12,41;UBERON:0003080,2.18e-12,41;UBERON:0006240,2.18e-12,41;UBERON:0003075,2.08e-11,82;UBERON:0007284,2.08e-11,82;UBERON:0001893,1.03e-10,34;UBERON:0003528,1.04e-10,34;UBERON:0002020,1.04e-10,34;UBERON:0000955,1.77e-10,68;UBERON:0006238,1.77e-10,68;UBERON:0001017,2.36e-10,81;UBERON:0002346,3.02e-10,86;UBERON:0002791,1.53e-09,32;UBERON:0001869,2.50e-09,32;UBERON:0001016,1.46e-08,89;UBERON:0000479,1.83e-08,773;UBERON:0000125,1.72e-07,9;UBERON:0002308,1.72e-07,9;UBERON:0010371,2.11e-07,104;UBERON:0002420,2.18e-07,9;UBERON:0007245,2.18e-07,9;UBERON:0010009,2.18e-07,9;UBERON:0010011,2.18e-07,9;UBERON:0000454,2.18e-07,9;UBERON:0002619,3.69e-07,22;UBERON:0003056,4.71e-07,61 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80808358407193,2.19093027116212,1.46379839637152,0.123121058076788,0,0,0,0,0,8.09982100928283,10.2625736812432,7.9497889126816,6.29382842958246,6.1412703695554,6.34746105595912,0,0,0,2.55641761914995,5.40243083452202,0.293600439334847,11.6339035791694,10.2277668209772,10.6335326650767,34.9308139814282,27.2070679455943,33.7423993600784,6.97911546141911,4.1566353805769,4.36651310138069,7.90258725479328,8.63452564845834,7.12324653058738,8.63077176966451,5.89169625016932,7.09446689665756,38.6115162425013,25.819387343353,13.5426486594342,4.51781614902251,5.45812300115692,5.39336362668203,20.8137046812214,24.7115350848592,14.7047538933779,3.29851300186716,4.3882004676759,2.13112375266347,13.6398342155434,17.0215567407342,10.5879782329248,5.7787193009051,5.21482918420201,4.56096573880745,13.3187890579341,26.8842674270922,17.0889689218078,10.1402537429732,8.2915676986367,12.7891773760109,21.0054540243946,20.7244112121279,25.0731915247445,5.70025487482497,3.77941686678271,5.47992461293902,59.8387231168497,50.7908908473782,61.3761385165853,81.5054725102029,58.4578141072578,67.820787914629,39.0016474943069,49.6107952358389,75.1361119224472,202.009593143603,146.028373143837,9.25199300053181,8.96813700770458,0.526768169550154,0,0,0.205601498999509,0,0.651844533267181,0.946895611469467,0,0,0.589211814949674,0.443067789167242,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,1.20460095262218,0.255973222308837,1.24930726552346,1.18388626022008,0,0,0,0.144824403882799,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0,0,0.175669571386252,1.24430121722827,0,0,0.649094787309367,0.870648686496336,0.531831842075461,23.6105718062289,6.86393892936153,39.0030376396043,0,0,0,0,0,0,0,1.8089173141853,0.71153252537342,2.67776490211736,0,0,0,0.367663080345869,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0.12663051166458,1.05927344650575,0.286836620748814,1.06400514659507,0,0,0,0.933633106199299,1.0776853765575,0.163461903113459,0,0,0.234321431833797,0,0,0.149448680551801,0,0.647491777472526,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0,0,0.213557388818567,0,0.600182192168805,0.103052529238439,0.257640540045629,0.18611685633159,0,0.0974370051611986,0.504867548488229,0.368199594569197,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,10.9514672630871,3.85944562915731,0,0.464367928031979,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.117408694235822,0.144366447761074,0,0.380508304469197,0,0,19.4511434809044,3.97807250736704,3.71577905721821,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0.190493682876507,0,0,0,0.308482478109971,0.600686115687835,0,0,0,0,2.58543431515556,0,0,0,0,0,0,0,0.857867961948885,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0.871533458600294,0.599837947092342,3.64871341923571,6.02708509718552,2.10833939483032,0,0,0,1.44781306667579,0.61642896765115,2.14873155887875,0,0.788123040807709,0.215627574859517,0.641715181398742,0.254094624222463,0,0,0,0,2.24702107184155,0,0.828831026872071,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,25.639235239238,12.7271378482984,8.00456683525833,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0.355123450626254,0.328508624055237,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0.676695028044854,0.308097234229289,0.614014698904518,0.689182862422653,1.39646318328756,0.580066775656914,0.681813019328807,0.267096106940212,0,0,0.127612712494584,0,0,0,0,0.924100740528266,0,0,0,0.572499546967965,0.744316738719335,0,0.190630193923825,0,0,0.95460974377781,0,1.2591072030832,0,0,0,0,0,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0.709522128141196,0.211107635297664,0.987884678879706,0,0,0.192444225451024,0,0,3.20088922641049,0,0,0,0,4.56702848308952,5.35246044999663,5.12682468456746,7.86164859010704,13.5749550118444,7.78167973431261,5.40031437238115,8.72437693923697,0,0,0.245040215981032,18.5803175125719,0,0,0,0.199579371432817,0.5745161103971,0,1.62310970137278,0.280797178113459,0,0.313359791546046,0,0,0,0,0.851692475380653,2.74804275804612,0.307240764308458,0,0.166849141711909,0.390776190804081,0,0,2.16364542780786,0.99921590399346,0,0.18714054040822,3.07667176470977,0,0,0,0,0,0,2.98244294329889,8.8621732338623,4.67496561096205,0.16480387422676,0,2.19172787076177,24.8655523978033,0,0,8.12359716043058,0,0.988551862620595,0,0,4.43895325366201,4.7896618469388,0,1.93866549219044,2.59750674853184,0,0,0,2.17499872630438,0,0,0,0,0,0,6.20018970069687,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| ||
|short_description=p3@ARHGAP24 | |||
}} | }} |
Latest revision as of 03:24, 19 September 2015
Short description: | p3@ARHGAP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGAP24_5end |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | -2bp_to_ENST00000506421_5end |
EntrezGene: | ARHGAP24 |
HGNC: | 25361 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 2.27e-39 | 115 |
leukocyte | 7.25e-39 | 136 |
defensive cell | 4.70e-38 | 48 |
phagocyte | 4.70e-38 | 48 |
macrophage dendritic cell progenitor | 2.26e-35 | 61 |
classical monocyte | 2.42e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.42e-34 | 42 |
monopoietic cell | 9.43e-34 | 59 |
monocyte | 9.43e-34 | 59 |
monoblast | 9.43e-34 | 59 |
promonocyte | 9.43e-34 | 59 |
hematopoietic lineage restricted progenitor cell | 1.40e-33 | 120 |
myeloid leukocyte | 1.76e-30 | 72 |
granulocyte monocyte progenitor cell | 2.45e-30 | 67 |
myeloid lineage restricted progenitor cell | 4.67e-28 | 66 |
hematopoietic cell | 1.80e-27 | 177 |
hematopoietic stem cell | 1.84e-27 | 168 |
hematopoietic oligopotent progenitor cell | 7.70e-25 | 161 |
hematopoietic multipotent progenitor cell | 7.70e-25 | 161 |
lymphocyte of B lineage | 7.45e-19 | 24 |
pro-B cell | 7.45e-19 | 24 |
myeloid cell | 1.80e-17 | 108 |
common myeloid progenitor | 1.80e-17 | 108 |
B cell | 2.04e-13 | 14 |
intermediate monocyte | 1.83e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.83e-08 | 9 |
lymphocyte | 2.90e-07 | 53 |
common lymphoid progenitor | 2.90e-07 | 53 |