FFCP PHASE1:Hg19::chr2:192015750..192015793,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:192015750..192015793,- to FFCP PHASE1:Hg19::chr2:192015750..192015793,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6775 | |EntrezGene=6775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11365 | |HGNC=11365 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000495326_5end | |||
|cluster_id=chr2:192015750..192015793,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_2_at_STAT4_5end | |||
|id=chr2:192015750..192015793,- | |||
|ontology_enrichment_celltype=CL:0000738!1.34e-24!140;CL:0000037!3.14e-21!172;CL:0000566!3.14e-21!172;CL:0000988!8.19e-21!182;CL:0002087!2.60e-20!119;CL:0002031!4.38e-19!124;CL:0002032!1.93e-18!165;CL:0000837!1.93e-18!165;CL:0000791!2.02e-13!18;CL:0000789!2.02e-13!18;CL:0002420!2.02e-13!18;CL:0002419!2.02e-13!18;CL:0000790!2.02e-13!18;CL:0000084!3.56e-13!25;CL:0000827!3.56e-13!25;CL:0000766!3.92e-11!76;CL:0000838!4.67e-11!52;CL:0000542!1.88e-10!53;CL:0000051!1.88e-10!53;CL:0000839!1.90e-09!70;CL:0000625!3.50e-09!11;CL:0002194!4.90e-09!63;CL:0000576!4.90e-09!63;CL:0000040!4.90e-09!63;CL:0000559!4.90e-09!63;CL:0000763!5.79e-09!112;CL:0000049!5.79e-09!112;CL:0000557!1.10e-08!71;CL:0002009!1.94e-08!65;CL:0002057!4.26e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.87e-17;18!CL:0000789;1.87e-17;18!CL:0002419;1.87e-17;18!CL:0000084;4.12e-17;25!CL:0000625;8.99e-12;11!CL:0000860;1.77e-08;33!CL:0002057;1.77e-08;33!CL:0002087;3.25e-08;104!CL:0000473;1.46e-07;39!CL:0000234;1.46e-07;39!CL:0000576;4.60e-07;48!CL:0000542;7.80e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.09e-30,136;CL:0000988,4.11e-29,177;CL:0000037,1.51e-28,168;CL:0002087,3.04e-25,115;CL:0002032,9.28e-25,161;CL:0000837,9.28e-25,161;CL:0002031,6.42e-23,120;CL:0000791,2.09e-17,18;CL:0000789,2.09e-17,18;CL:0002420,2.09e-17,18;CL:0002419,2.09e-17,18;CL:0000790,2.09e-17,18;CL:0000084,5.41e-17,25;CL:0000827,5.41e-17,25;CL:0000766,1.93e-14,72;CL:0000763,3.92e-13,108;CL:0000049,3.92e-13,108;CL:0000838,3.11e-12,52;CL:0000839,6.19e-12,66;CL:0002194,7.47e-12,59;CL:0000576,7.47e-12,59;CL:0000040,7.47e-12,59;CL:0000559,7.47e-12,59;CL:0000542,9.33e-12,53;CL:0000051,9.33e-12,53;CL:0000625,9.61e-12,11;CL:0002009,5.04e-11,61;CL:0000557,6.51e-11,67;CL:0000473,3.99e-09,48;CL:0000234,3.99e-09,48;CL:0000860,1.02e-08,42;CL:0002057,1.02e-08,42 | |||
|ontology_enrichment_development_v019=CL:0000790;1.87e-17;18!CL:0000051;7.80e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.95e-20!115;UBERON:0002390!8.28e-17!102;UBERON:0003061!8.28e-17!102;UBERON:0002193!3.55e-15!112;UBERON:0000178!8.37e-10!15;UBERON:0000179!8.37e-10!15;UBERON:0000463!8.37e-10!15;UBERON:0002780!4.24e-09!41;UBERON:0001890!4.24e-09!41;UBERON:0006240!4.24e-09!41;UBERON:0003080!4.36e-09!42;UBERON:0001869!8.73e-09!32;UBERON:0002619!1.23e-08!22;UBERON:0002371!1.41e-08!80;UBERON:0001950!3.29e-08!20;UBERON:0002020!4.45e-08!34;UBERON:0003528!4.45e-08!34;UBERON:0001049!6.17e-08!57;UBERON:0005068!6.17e-08!57;UBERON:0006241!6.17e-08!57;UBERON:0007135!6.17e-08!57;UBERON:0001893!7.23e-08!34;UBERON:0002791!1.82e-07!33;UBERON:0000956!2.70e-07!25;UBERON:0000203!2.70e-07!25;UBERON:0002616!6.36e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-12;15!UBERON:0000179;1.55e-12;15!UBERON:0000463;1.55e-12;15!UBERON:0002619;1.32e-10;22!UBERON:0002390;2.56e-10;32!UBERON:0001950;4.73e-10;20!UBERON:0000956;1.49e-08;25!UBERON:0000203;1.49e-08;25!UBERON:0001869;2.92e-08;32!UBERON:0003528;1.31e-07;34!UBERON:0002020;1.31e-07;34!UBERON:0002791;1.86e-07;32!UBERON:0001893;2.00e-07;34!UBERON:0002780;8.28e-07;41!UBERON:0001890;8.28e-07;41 | |||
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| ||
|short_description=p2@STAT4 | |||
}} | }} |
Latest revision as of 04:21, 19 September 2015
Short description: | p2@STAT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STAT4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -9bp_to_ENST00000495326_5end |
EntrezGene: | STAT4 |
HGNC: | 11365 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.29e-21 | 98 |
blood island | 1.29e-21 | 98 |
hemolymphoid system | 4.42e-19 | 108 |
adult organism | 1.38e-15 | 114 |
blood | 1.43e-12 | 15 |
haemolymphatic fluid | 1.43e-12 | 15 |
organism substance | 1.43e-12 | 15 |
immune system | 3.69e-11 | 93 |
bone marrow | 6.52e-11 | 76 |
regional part of cerebral cortex | 1.24e-10 | 22 |
neocortex | 4.67e-10 | 20 |
regional part of forebrain | 1.44e-09 | 41 |
forebrain | 1.44e-09 | 41 |
anterior neural tube | 1.44e-09 | 41 |
future forebrain | 1.44e-09 | 41 |
cerebral hemisphere | 3.34e-09 | 32 |
bone element | 4.80e-09 | 82 |
brain grey matter | 1.15e-08 | 34 |
gray matter | 1.15e-08 | 34 |
cerebral cortex | 1.42e-08 | 25 |
pallium | 1.42e-08 | 25 |
neural tube | 3.03e-08 | 56 |
neural rod | 3.03e-08 | 56 |
future spinal cord | 3.03e-08 | 56 |
neural keel | 3.03e-08 | 56 |
regional part of nervous system | 3.16e-08 | 53 |
regional part of brain | 3.16e-08 | 53 |
telencephalon | 3.33e-08 | 34 |
regional part of telencephalon | 3.57e-08 | 32 |
skeletal element | 2.19e-07 | 90 |
skeletal system | 9.93e-07 | 100 |