FFCP PHASE1:Hg19::chr2:198540452..198540505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130132 | |EntrezGene=130132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26402 | |HGNC=26402 | ||
|TSSclassifier=strong | |||
|UniProt=Q52LD8 | |UniProt=Q52LD8 | ||
|association_with_transcript=78bp_to_NM_144629,uc002uuo.3_5end | |association_with_transcript=78bp_to_NM_144629,uc002uuo.3_5end | ||
|cluster_id=chr2:198540452..198540505,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_RFTN2_5end | |description=CAGE_peak_3_at_RFTN2_5end | ||
|id=chr2:198540452..198540505,- | |id=chr2:198540452..198540505,- | ||
|ontology_enrichment_celltype=CL:0000055!1.87e-07!180 | |ontology_enrichment_celltype=CL:0000055!1.87e-07!180 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.51e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.11e-33!82;UBERON:0002616!2.12e-33!59;UBERON:0001049!3.34e-33!57;UBERON:0005068!3.34e-33!57;UBERON:0006241!3.34e-33!57;UBERON:0007135!3.34e-33!57;UBERON:0007023!4.16e-33!115;UBERON:0005743!7.16e-32!86;UBERON:0000073!4.44e-30!94;UBERON:0001016!4.44e-30!94;UBERON:0000955!5.20e-28!69;UBERON:0006238!5.20e-28!69;UBERON:0003080!1.95e-24!42;UBERON:0002780!2.63e-24!41;UBERON:0001890!2.63e-24!41;UBERON:0006240!2.63e-24!41;UBERON:0002346!4.47e-24!90;UBERON:0002020!8.59e-24!34;UBERON:0003528!8.59e-24!34;UBERON:0001893!1.08e-23!34;UBERON:0003075!3.71e-23!86;UBERON:0007284!3.71e-23!86;UBERON:0002791!5.98e-23!33;UBERON:0001869!4.87e-22!32;UBERON:0000924!1.17e-18!173;UBERON:0006601!1.17e-18!173;UBERON:0004121!9.08e-18!169;UBERON:0000033!9.94e-18!123;UBERON:0000153!3.42e-17!129;UBERON:0007811!3.42e-17!129;UBERON:0000956!1.08e-16!25;UBERON:0000203!1.08e-16!25;UBERON:0003056!1.39e-16!61;UBERON:0002619!1.51e-16!22;UBERON:0001950!5.74e-15!20;UBERON:0000475!2.33e-13!365;UBERON:0000477!2.02e-12!286;UBERON:0000025!4.06e-12!194;UBERON:0004111!9.19e-12!241;UBERON:0000468!1.22e-11!659;UBERON:0000119!4.73e-11!312;UBERON:0000483!2.01e-10!309;UBERON:0003076!8.38e-10!15;UBERON:0003057!8.38e-10!15;UBERON:0000481!1.03e-08!347;UBERON:0002308!1.21e-08!9;UBERON:0000125!1.21e-08!9;UBERON:0002420!1.57e-08!9;UBERON:0007245!1.57e-08!9;UBERON:0010009!1.57e-08!9;UBERON:0010011!1.57e-08!9;UBERON:0000454!1.57e-08!9;UBERON:0004732!3.29e-08!13;UBERON:0004733!2.07e-07!12;UBERON:0002028!2.07e-07!12;UBERON:0007277!2.07e-07!12;UBERON:0002298!3.31e-07!8;UBERON:0000467!5.19e-07!625;UBERON:0009663!5.20e-07!7;UBERON:0000480!6.80e-07!626;UBERON:0000064!7.73e-07!219;UBERON:0000922!9.86e-07!612 | |ontology_enrichment_uberon=UBERON:0001017!1.11e-33!82;UBERON:0002616!2.12e-33!59;UBERON:0001049!3.34e-33!57;UBERON:0005068!3.34e-33!57;UBERON:0006241!3.34e-33!57;UBERON:0007135!3.34e-33!57;UBERON:0007023!4.16e-33!115;UBERON:0005743!7.16e-32!86;UBERON:0000073!4.44e-30!94;UBERON:0001016!4.44e-30!94;UBERON:0000955!5.20e-28!69;UBERON:0006238!5.20e-28!69;UBERON:0003080!1.95e-24!42;UBERON:0002780!2.63e-24!41;UBERON:0001890!2.63e-24!41;UBERON:0006240!2.63e-24!41;UBERON:0002346!4.47e-24!90;UBERON:0002020!8.59e-24!34;UBERON:0003528!8.59e-24!34;UBERON:0001893!1.08e-23!34;UBERON:0003075!3.71e-23!86;UBERON:0007284!3.71e-23!86;UBERON:0002791!5.98e-23!33;UBERON:0001869!4.87e-22!32;UBERON:0000924!1.17e-18!173;UBERON:0006601!1.17e-18!173;UBERON:0004121!9.08e-18!169;UBERON:0000033!9.94e-18!123;UBERON:0000153!3.42e-17!129;UBERON:0007811!3.42e-17!129;UBERON:0000956!1.08e-16!25;UBERON:0000203!1.08e-16!25;UBERON:0003056!1.39e-16!61;UBERON:0002619!1.51e-16!22;UBERON:0001950!5.74e-15!20;UBERON:0000475!2.33e-13!365;UBERON:0000477!2.02e-12!286;UBERON:0000025!4.06e-12!194;UBERON:0004111!9.19e-12!241;UBERON:0000468!1.22e-11!659;UBERON:0000119!4.73e-11!312;UBERON:0000483!2.01e-10!309;UBERON:0003076!8.38e-10!15;UBERON:0003057!8.38e-10!15;UBERON:0000481!1.03e-08!347;UBERON:0002308!1.21e-08!9;UBERON:0000125!1.21e-08!9;UBERON:0002420!1.57e-08!9;UBERON:0007245!1.57e-08!9;UBERON:0010009!1.57e-08!9;UBERON:0010011!1.57e-08!9;UBERON:0000454!1.57e-08!9;UBERON:0004732!3.29e-08!13;UBERON:0004733!2.07e-07!12;UBERON:0002028!2.07e-07!12;UBERON:0007277!2.07e-07!12;UBERON:0002298!3.31e-07!8;UBERON:0000467!5.19e-07!625;UBERON:0009663!5.20e-07!7;UBERON:0000480!6.80e-07!626;UBERON:0000064!7.73e-07!219;UBERON:0000922!9.86e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.28e-28;34!UBERON:0003528;1.51e-27;34!UBERON:0002020;1.51e-27;34!UBERON:0002791;5.93e-27;32!UBERON:0001869;7.65e-27;32!UBERON:0002619;2.58e-24;22!UBERON:0000073;3.27e-24;53!UBERON:0002616;3.27e-24;53!UBERON:0002780;7.61e-24;41!UBERON:0001890;7.61e-24;41!UBERON:0000956;3.33e-22;25!UBERON:0000203;3.33e-22;25!UBERON:0001950;5.95e-22;20!UBERON:0001017;1.87e-19;75!UBERON:0000955;5.75e-17;68!UBERON:0001016;2.00e-15;83!UBERON:0000125;3.75e-12;9!UBERON:0002308;3.75e-12;9!UBERON:0002420;5.55e-12;9!UBERON:0007245;5.55e-12;9!UBERON:0010009;5.55e-12;9!UBERON:0010011;5.55e-12;9!UBERON:0000454;5.55e-12;9!UBERON:0004732;1.19e-10;13!UBERON:0009663;1.02e-09;7!UBERON:0004733;1.77e-09;12!UBERON:0002028;1.77e-09;12!UBERON:0007023;2.32e-09;114!UBERON:0002298;9.79e-09;6!UBERON:0000200;3.18e-08;6!UBERON:0011216;1.77e-07;132!UBERON:0000349;2.46e-07;5!UBERON:0001872;3.25e-07;5!UBERON:0001871;7.13e-07;6!UBERON:0002021;7.77e-07;5 | |||
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| ||
|short_description=p3@RFTN2 | |short_description=p3@RFTN2 | ||
}} | }} |
Latest revision as of 08:28, 19 September 2015
Short description: | p3@RFTN2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RFTN2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 78bp_to_NM_144629, uc002uuo.3_5end |
EntrezGene: | RFTN2 |
HGNC: | 26402 |
UniProt: | Q52LD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data