FFCP PHASE1:Hg19::chr15:83316348..83316368,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64506 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21744 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010uof.1_5end | |||
|cluster_id=chr15:83316348..83316368,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_6_at_CPEB1_5end | |||
|id=chr15:83316348..83316368,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;7.54e-12;3!CL:0000764;3.12e-08;2!CL:0000558;3.12e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,5.11e-12,3;CL:0000764,4.54e-08,2;CL:0000765,4.54e-08,2;CL:0000050,4.54e-08,2;CL:0000038,4.54e-08,2;CL:0000558,4.54e-08,2;CL:0000547,4.54e-08,2;CL:0000549,4.54e-08,2;CL:0000550,4.54e-08,2;CL:0000552,4.54e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.44e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.42e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.27e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.79e-40!115;UBERON:0001049!2.09e-28!57;UBERON:0005068!2.09e-28!57;UBERON:0006241!2.09e-28!57;UBERON:0007135!2.09e-28!57;UBERON:0003075!1.19e-25!86;UBERON:0007284!1.19e-25!86;UBERON:0000073!2.11e-25!94;UBERON:0001016!2.11e-25!94;UBERON:0005743!7.03e-24!86;UBERON:0002346!1.16e-23!90;UBERON:0000955!8.88e-23!69;UBERON:0006238!8.88e-23!69;UBERON:0001017!2.51e-22!82;UBERON:0002616!3.83e-22!59;UBERON:0003080!3.82e-21!42;UBERON:0002780!2.59e-20!41;UBERON:0001890!2.59e-20!41;UBERON:0006240!2.59e-20!41;UBERON:0003056!3.36e-18!61;UBERON:0001893!3.90e-17!34;UBERON:0002020!4.09e-17!34;UBERON:0003528!4.09e-17!34;UBERON:0002791!3.80e-16!33;UBERON:0001869!4.71e-15!32;UBERON:0004121!1.11e-12!169;UBERON:0000033!2.05e-12!123;UBERON:0000153!2.90e-12!129;UBERON:0007811!2.90e-12!129;UBERON:0000924!6.13e-12!173;UBERON:0006601!6.13e-12!173;UBERON:0002308!4.03e-11!9;UBERON:0000125!4.03e-11!9;UBERON:0002619!5.68e-11!22;UBERON:0002298!2.01e-10!8;UBERON:0001950!3.55e-09!20;UBERON:0000956!4.44e-09!25;UBERON:0000203!4.44e-09!25;UBERON:0009663!8.21e-09!7;UBERON:0002420!1.58e-08!9;UBERON:0007245!1.58e-08!9;UBERON:0010009!1.58e-08!9;UBERON:0010011!1.58e-08!9;UBERON:0000454!1.58e-08!9;UBERON:0003076!2.18e-08!15;UBERON:0003057!2.18e-08!15;UBERON:0000200!8.01e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.05e-28;41!UBERON:0001890;4.05e-28;41!UBERON:0001893;9.45e-26;34!UBERON:0000073;4.69e-25;53!UBERON:0002616;4.69e-25;53!UBERON:0003528;2.23e-24;34!UBERON:0002020;2.23e-24;34!UBERON:0002791;4.17e-22;32!UBERON:0001869;6.25e-22;32!UBERON:0002619;1.18e-20;22!UBERON:0001950;5.93e-19;20!UBERON:0000956;5.72e-18;25!UBERON:0000203;5.72e-18;25!UBERON:0002298;1.39e-16;6!UBERON:0000125;4.55e-15;9!UBERON:0002308;4.55e-15;9!UBERON:0001016;3.41e-14;83!UBERON:0001017;4.51e-13;75!UBERON:0007023;5.89e-13;114!UBERON:0000955;8.53e-13;68!UBERON:0000988;1.92e-12;3!UBERON:0004732;1.40e-10;13!UBERON:0002420;1.54e-10;9!UBERON:0007245;1.54e-10;9!UBERON:0010009;1.54e-10;9!UBERON:0010011;1.54e-10;9!UBERON:0000454;1.54e-10;9!UBERON:0000200;4.19e-10;6!UBERON:0005162;2.54e-09;2!UBERON:0000122;2.54e-09;2!UBERON:0009663;3.85e-09;7!UBERON:0001894;4.66e-09;7!UBERON:0001897;8.12e-09;2!UBERON:0001875;8.12e-09;2!UBERON:0006514;8.12e-09;2!UBERON:0010225;8.12e-09;2!UBERON:0002148;1.06e-08;2!UBERON:0006331;1.06e-08;2!UBERON:0009662;1.06e-08;2!UBERON:0004733;4.11e-08;12!UBERON:0002028;4.11e-08;12!UBERON:0000349;2.38e-07;5!UBERON:0001872;2.80e-07;5!UBERON:0002021;2.80e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.87e-50,56;UBERON:0005068,2.87e-50,56;UBERON:0006241,2.87e-50,56;UBERON:0007135,2.87e-50,56;UBERON:0000073,1.26e-45,53;UBERON:0002616,1.26e-45,53;UBERON:0007023,1.17e-39,114;UBERON:0002780,9.79e-39,41;UBERON:0001890,9.79e-39,41;UBERON:0003080,9.79e-39,41;UBERON:0006240,9.79e-39,41;UBERON:0001016,9.58e-38,89;UBERON:0003075,2.36e-37,82;UBERON:0007284,2.36e-37,82;UBERON:0000955,2.91e-36,68;UBERON:0006238,2.91e-36,68;UBERON:0002346,2.82e-35,86;UBERON:0001017,1.35e-34,81;UBERON:0010371,3.32e-32,104;UBERON:0001893,5.99e-31,34;UBERON:0003528,6.71e-31,34;UBERON:0002020,6.71e-31,34;UBERON:0003056,1.42e-29,61;UBERON:0002791,1.29e-25,32;UBERON:0001869,1.83e-25,32;UBERON:0002619,7.42e-21,22;UBERON:0010314,2.17e-20,132;UBERON:0004121,4.42e-20,171;UBERON:0000924,4.42e-20,171;UBERON:0006601,4.42e-20,171;UBERON:0001950,3.66e-19,20;UBERON:0000956,3.81e-18,25;UBERON:0000203,3.81e-18,25;UBERON:0002298,8.02e-17,6;UBERON:0000125,2.04e-15,9;UBERON:0002308,2.04e-15,9;UBERON:0000988,1.02e-12,3;UBERON:0011216,2.13e-12,223;UBERON:0003076,2.39e-12,15;UBERON:0003057,2.39e-12,15;UBERON:0002420,9.77e-11,9;UBERON:0007245,9.77e-11,9;UBERON:0010009,9.77e-11,9;UBERON:0010011,9.77e-11,9;UBERON:0000454,9.77e-11,9;UBERON:0004732,1.05e-10,13;UBERON:0000200,3.15e-10,6;UBERON:0000025,8.67e-10,192;UBERON:0005162,2.45e-09,2;UBERON:0000122,2.45e-09,2;UBERON:0009663,2.75e-09,7;UBERON:0001894,3.41e-09,7;UBERON:0006222,3.41e-09,7;UBERON:0001875,5.42e-09,2;UBERON:0006514,5.42e-09,2;UBERON:0002148,5.63e-09,2;UBERON:0006331,5.63e-09,2;UBERON:0009662,5.63e-09,2;UBERON:0001897,6.85e-09,2;UBERON:0010225,6.85e-09,2;UBERON:0004733,3.16e-08,12;UBERON:0002028,3.16e-08,12;UBERON:0007277,3.16e-08,12;UBERON:0004111,6.28e-08,240;UBERON:0000349,1.87e-07,5;UBERON:0002021,2.04e-07,5;UBERON:0001872,2.66e-07,5 | |||
|phase1_expression=0.181678379270557,1.07050261945492,0,0,0,0,0,0,1.04474251279935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.621984346622316,0.288239906833923,1.2624243342638,0.317489471460845,1.52795370223311,2.34434894420094,1.71072446022705,0,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,2.27407504055985,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0,0,0.229628896329213,0,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,1.3071772551245,0.512900250232778,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,1.68803299692615,0.667852230137435,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,1.11321717794222,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0.552896299656123,0.295547618953547,0.87754158861589,0,0,1.46205491157214,0,0,0,0.108647371922008,0,0,0,0,0,0.332423363800313,0,0.392125068635479,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0.353830258013357,0,0,0,0.313265848516366,4.92028270758942,0,3.04543779442941,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.290967049465258,0.706049013532002,0,0,0,1.51945910294109,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0.869767748958028,0,0.135904206073614,0.209205692624666,0,0.577901179803038,1.80126086612937,5.06549901900374,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.446342914883745,0,0,0,0,0,0,0,0,3.18091875923721,0.953423842781029,0,0,0,0,0,0.971992906528395,0.335434687599266,0.0788057072991982,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0.979762080328227,1.19730191562487,0.574647645245373,0,0,0,0,1.93924434542326,3.30581504356725,0.171086837884329,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,0.976210119215705,1.3771002377715,0.573409195690071,3.99344585532668,4.03626619118992,0.138348634936231,0,1.66814029295813,2.28372266835974,0.470531639396343,0,0,0,0.233713309847224,0,0.378806010550178,0,0.889811221596536,0.228840068396924,0.302461847526478,0,0,0,0,0.310525913752519,0.414706207840855,0,0,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0.464033759878494,0,0,0,0.336749488765919,0,0.770479321629213,0,0.260994291965212,0.226705925512272,0,0,0.358177682162975,0.308801447160972,0.438568099157414,0,0.192914038270915,0,0,0.345430341731199,0.607719912354764,1.7973596699725,0,0,0.163565394255844,0.327609848846413,0.245772908753719,0,0,0,0,0,2.94569520402945,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,1.66995985250795,0,2.55414174491442,1.43581454968528,0,1.9364030689981,0.484426936895553,4.28308260777463,0,0,0,0,0,0,2.18807844327902,1.35378591028663,0.80682027481408,0,0,0,0,2.22874029240702,0,1.2401207790071,2.72687983833799,0,0,0.496211178389294,0,0,0,0.336283722218824,0,1.82129753081038,0,0,0,3.26254718288792,1.71009211263408,0.236387681767936,0,1.02041020705668,0.628462359664008,0,0,0,0.9555033757741,0.78624198594322,0.158013611732727,0,0,0,0,0.3414369541879,0,0,1.77498001095848,1.02256085710989,0.423387050190929,0,0,0,0.111855431797792,0,0,0,0,0,0,0.467878926924211,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,1.47088993052343,0,2.55201007249429,5.34683520588755,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,6.02026249236095,0,1.29183831362738,0,0,0,0,0,0,0,0,0,0,0.36757959813938,0,0.833565680400634,1.07185652062471,1.65833887891756,5.48194878068045,0.426467963801962,0,0,0.0620747142958579,0,0.572824424503484,0,0,0,0.0673520530145875,0.286888821570705,0,0,0.426909383510862,1.9307228228694,0,0,0.122241444182866,0,2.66302709674205,0,0.320568492303233 | |||
|short_description=p6@CPEB1 | |||
}} |
Latest revision as of 11:09, 19 September 2015
Short description: | p6@CPEB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CPEB1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_uc010uof.1_5end |
EntrezGene: | CPEB1 |
HGNC: | 21744 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 5.11e-12 | 3 |
erythroid lineage cell | 4.54e-08 | 2 |
erythroblast | 4.54e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 4.54e-08 | 2 |
erythroid progenitor cell | 4.54e-08 | 2 |
reticulocyte | 4.54e-08 | 2 |
proerythroblast | 4.54e-08 | 2 |
basophilic erythroblast | 4.54e-08 | 2 |
polychromatophilic erythroblast | 4.54e-08 | 2 |
orthochromatic erythroblast | 4.54e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.27e-08 | 2 |