FFCP PHASE1:Hg19::chr15:84116106..84116144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6457 | |EntrezGene=6457 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10832 | |HGNC=10832 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IVP1 | |UniProt=Q8IVP1 | ||
|association_with_transcript=0bp_to_ENST00000535412_5end | |association_with_transcript=0bp_to_ENST00000535412_5end | ||
|cluster_id=chr15:84116106..84116144,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SH3GL3_5end | |description=CAGE_peak_1_at_SH3GL3_5end | ||
|id=chr15:84116106..84116144,+ | |id=chr15:84116106..84116144,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.40e-07;6!CL:0000404;4.40e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.79e-07,6;CL:0000031,4.79e-07,6;CL:0000404,4.79e-07,6;CL:0000047,7.82e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.24e-16;82!CL:0000031;4.40e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.51e-42!94;UBERON:0001016!3.51e-42!94;UBERON:0005743!1.25e-39!86;UBERON:0001017!8.16e-39!82;UBERON:0002346!2.83e-38!90;UBERON:0003075!2.24e-37!86;UBERON:0007284!2.24e-37!86;UBERON:0001049!2.52e-36!57;UBERON:0005068!2.52e-36!57;UBERON:0006241!2.52e-36!57;UBERON:0007135!2.52e-36!57;UBERON:0000924!9.06e-33!173;UBERON:0006601!9.06e-33!173;UBERON:0004121!1.13e-31!169;UBERON:0000153!2.31e-31!129;UBERON:0007811!2.31e-31!129;UBERON:0000955!6.38e-31!69;UBERON:0006238!6.38e-31!69;UBERON:0000033!2.09e-30!123;UBERON:0002780!1.12e-29!41;UBERON:0001890!1.12e-29!41;UBERON:0006240!1.12e-29!41;UBERON:0002616!1.14e-29!59;UBERON:0003080!1.91e-28!42;UBERON:0003056!3.39e-28!61;UBERON:0002020!5.87e-25!34;UBERON:0003528!5.87e-25!34;UBERON:0001893!6.19e-25!34;UBERON:0002791!3.41e-24!33;UBERON:0007023!3.98e-24!115;UBERON:0001869!2.98e-23!32;UBERON:0002619!3.59e-18!22;UBERON:0000956!5.97e-18!25;UBERON:0000203!5.97e-18!25;UBERON:0001950!1.32e-16!20;UBERON:0000475!4.69e-10!365;UBERON:0003076!5.88e-09!15;UBERON:0003057!5.88e-09!15;UBERON:0002308!1.73e-08!9;UBERON:0000125!1.73e-08!9;UBERON:0002420!1.93e-08!9;UBERON:0007245!1.93e-08!9;UBERON:0010009!1.93e-08!9;UBERON:0010011!1.93e-08!9;UBERON:0000454!1.93e-08!9;UBERON:0000064!4.81e-08!219;UBERON:0000481!1.18e-07!347;UBERON:0004732!1.53e-07!13;UBERON:0001871!5.02e-07!7;UBERON:0009663!6.51e-07!7;UBERON:0004733!9.35e-07!12;UBERON:0002028!9.35e-07!12;UBERON:0007277!9.35e-07!12 | |ontology_enrichment_uberon=UBERON:0000073!3.51e-42!94;UBERON:0001016!3.51e-42!94;UBERON:0005743!1.25e-39!86;UBERON:0001017!8.16e-39!82;UBERON:0002346!2.83e-38!90;UBERON:0003075!2.24e-37!86;UBERON:0007284!2.24e-37!86;UBERON:0001049!2.52e-36!57;UBERON:0005068!2.52e-36!57;UBERON:0006241!2.52e-36!57;UBERON:0007135!2.52e-36!57;UBERON:0000924!9.06e-33!173;UBERON:0006601!9.06e-33!173;UBERON:0004121!1.13e-31!169;UBERON:0000153!2.31e-31!129;UBERON:0007811!2.31e-31!129;UBERON:0000955!6.38e-31!69;UBERON:0006238!6.38e-31!69;UBERON:0000033!2.09e-30!123;UBERON:0002780!1.12e-29!41;UBERON:0001890!1.12e-29!41;UBERON:0006240!1.12e-29!41;UBERON:0002616!1.14e-29!59;UBERON:0003080!1.91e-28!42;UBERON:0003056!3.39e-28!61;UBERON:0002020!5.87e-25!34;UBERON:0003528!5.87e-25!34;UBERON:0001893!6.19e-25!34;UBERON:0002791!3.41e-24!33;UBERON:0007023!3.98e-24!115;UBERON:0001869!2.98e-23!32;UBERON:0002619!3.59e-18!22;UBERON:0000956!5.97e-18!25;UBERON:0000203!5.97e-18!25;UBERON:0001950!1.32e-16!20;UBERON:0000475!4.69e-10!365;UBERON:0003076!5.88e-09!15;UBERON:0003057!5.88e-09!15;UBERON:0002308!1.73e-08!9;UBERON:0000125!1.73e-08!9;UBERON:0002420!1.93e-08!9;UBERON:0007245!1.93e-08!9;UBERON:0010009!1.93e-08!9;UBERON:0010011!1.93e-08!9;UBERON:0000454!1.93e-08!9;UBERON:0000064!4.81e-08!219;UBERON:0000481!1.18e-07!347;UBERON:0004732!1.53e-07!13;UBERON:0001871!5.02e-07!7;UBERON:0009663!6.51e-07!7;UBERON:0004733!9.35e-07!12;UBERON:0002028!9.35e-07!12;UBERON:0007277!9.35e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.60e-30;41!UBERON:0001890;3.60e-30;41!UBERON:0001893;4.22e-29;34!UBERON:0003528;4.51e-29;34!UBERON:0002020;4.51e-29;34!UBERON:0002791;1.13e-28;32!UBERON:0001869;1.40e-28;32!UBERON:0002619;6.94e-28;22!UBERON:0000073;1.54e-27;53!UBERON:0002616;1.54e-27;53!UBERON:0001950;2.11e-25;20!UBERON:0000956;1.28e-23;25!UBERON:0000203;1.28e-23;25!UBERON:0000955;3.45e-19;68!UBERON:0001017;8.60e-19;75!UBERON:0001016;3.76e-18;83!UBERON:0000125;1.70e-12;9!UBERON:0002308;1.70e-12;9!UBERON:0002420;1.99e-12;9!UBERON:0007245;1.99e-12;9!UBERON:0010009;1.99e-12;9!UBERON:0010011;1.99e-12;9!UBERON:0000454;1.99e-12;9!UBERON:0000922;5.56e-11;49!UBERON:0007023;7.00e-11;114!UBERON:0009663;5.10e-10;7!UBERON:0004732;2.55e-09;13!UBERON:0001871;4.76e-09;6!UBERON:0002298;1.04e-08;6!UBERON:0001894;1.04e-08;7!UBERON:0000200;1.24e-08;6!UBERON:0004733;3.86e-08;12!UBERON:0002028;3.86e-08;12!UBERON:0000349;1.24e-07;5!UBERON:0002021;1.35e-07;5!UBERON:0001872;2.47e-07;5!UBERON:0011216;2.49e-07;132 | |||
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| ||
|short_description=p1@SH3GL3 | |short_description=p1@SH3GL3 | ||
}} | }} |
Latest revision as of 12:27, 19 September 2015
Short description: | p1@SH3GL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SH3GL3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000535412_5end |
EntrezGene: | SH3GL3 |
HGNC: | 10832 |
UniProt: | Q8IVP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.79e-07 | 6 |
neuroblast | 4.79e-07 | 6 |
electrically signaling cell | 4.79e-07 | 6 |
neuronal stem cell | 7.82e-07 | 8 |