FFCP PHASE1:Hg19::chr1:205197018..205197122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9911 | |EntrezGene=9911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24239 | |HGNC=24239 | ||
|TSSclassifier=strong | |||
|UniProt=O75069 | |UniProt=O75069 | ||
|association_with_transcript=0bp_to_NM_014858,uc001hbz.1_5end | |association_with_transcript=0bp_to_NM_014858,uc001hbz.1_5end | ||
|cluster_id=chr1:205197018..205197122,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_TMCC2_5end | |description=CAGE_peak_1_at_TMCC2_5end | ||
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|ontology_enrichment_celltype=CL:0000133!7.88e-10!59;CL:0000333!2.06e-08!41;CL:0000221!9.55e-08!71;CL:0002319!2.98e-07!25 | |ontology_enrichment_celltype=CL:0000133!7.88e-10!59;CL:0000333!2.06e-08!41;CL:0000221!9.55e-08!71;CL:0002319!2.98e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.64e-07;25 | |ontology_enrichment_celltype_v019=CL:0002319;2.64e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,5.78e-10,59;CL:0000333,1.36e-08,41;CL:0002319,2.05e-07,25;CL:0000221,2.40e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.48e-09;82 | |ontology_enrichment_development_v019=UBERON:0006601;1.48e-09;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;8.99e-19;34!UBERON:0003528;1.07e-18;34!UBERON:0002020;1.07e-18;34!UBERON:0000073;1.27e-18;53!UBERON:0002616;1.27e-18;53!UBERON:0001869;1.73e-18;32!UBERON:0002791;1.83e-18;32!UBERON:0002780;1.94e-18;41!UBERON:0001890;1.94e-18;41!UBERON:0000956;5.48e-16;25!UBERON:0000203;5.48e-16;25!UBERON:0000955;4.57e-15;68!UBERON:0002619;5.91e-15;22!UBERON:0001017;1.03e-14;75!UBERON:0001016;7.24e-14;83!UBERON:0001950;1.23e-13;20!UBERON:0004732;9.63e-09;13!UBERON:0004733;4.35e-08;12!UBERON:0002028;4.35e-08;12!UBERON:0007023;2.98e-07;114!UBERON:0000125;3.24e-07;9!UBERON:0002308;3.24e-07;9!UBERON:0002420;4.13e-07;9!UBERON:0007245;4.13e-07;9!UBERON:0010009;4.13e-07;9!UBERON:0010011;4.13e-07;9!UBERON:0000454;4.13e-07;9!UBERON:0000922;4.29e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0001893;8.99e-19;34!UBERON:0003528;1.07e-18;34!UBERON:0002020;1.07e-18;34!UBERON:0000073;1.27e-18;53!UBERON:0002616;1.27e-18;53!UBERON:0001869;1.73e-18;32!UBERON:0002791;1.83e-18;32!UBERON:0002780;1.94e-18;41!UBERON:0001890;1.94e-18;41!UBERON:0000956;5.48e-16;25!UBERON:0000203;5.48e-16;25!UBERON:0000955;4.57e-15;68!UBERON:0002619;5.91e-15;22!UBERON:0001017;1.03e-14;75!UBERON:0001016;7.24e-14;83!UBERON:0001950;1.23e-13;20!UBERON:0004732;9.63e-09;13!UBERON:0004733;4.35e-08;12!UBERON:0002028;4.35e-08;12!UBERON:0007023;2.98e-07;114!UBERON:0000125;3.24e-07;9!UBERON:0002308;3.24e-07;9!UBERON:0002420;4.13e-07;9!UBERON:0007245;4.13e-07;9!UBERON:0010009;4.13e-07;9!UBERON:0010011;4.13e-07;9!UBERON:0000454;4.13e-07;9!UBERON:0000922;4.29e-07;49 | ||
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| ||
|short_description=p1@TMCC2 | |short_description=p1@TMCC2 | ||
}} | }} |
Latest revision as of 02:28, 20 September 2015
Short description: | p1@TMCC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMCC2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_014858, uc001hbz.1_5end |
EntrezGene: | TMCC2 |
HGNC: | 24239 |
UniProt: | O75069 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 5.78e-10 | 59 |
migratory neural crest cell | 1.36e-08 | 41 |
neural cell | 2.05e-07 | 25 |
ectodermal cell | 2.40e-07 | 72 |