FFCP PHASE1:Hg19::chr19:7660716..7660802,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57662 | |EntrezGene=57662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29307 | |HGNC=29307 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P1Y5 | |UniProt=Q9P1Y5 | ||
|association_with_transcript=0bp_to_ENST00000160298,ENST00000446248,NM_001080429,NM_020902,uc002mgu.3,uc002mgv.3_5end | |association_with_transcript=0bp_to_ENST00000160298,ENST00000446248,NM_001080429,NM_020902,uc002mgu.3,uc002mgv.3_5end | ||
|cluster_id=chr19:7660716..7660802,+ | |||
|description=CAGE_peak_1_at_CAMSAP3_5end | |description=CAGE_peak_1_at_CAMSAP3_5end | ||
|id=chr19:7660716..7660802,+ | |id=chr19:7660716..7660802,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.02e-20!254;CL:0000223!2.04e-13!59;CL:0002076!3.63e-10!43 | |ontology_enrichment_celltype=CL:0000066!3.02e-20!254;CL:0000223!2.04e-13!59;CL:0002076!3.63e-10!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.79e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.86e-21,253;CL:0000223,3.53e-15,58;CL:0002076,5.90e-12,42 | |||
|ontology_enrichment_development_v019=CL:0000223;7.56e-09;58!UBERON:0006601;9.66e-08;82!UBERON:0001041;3.90e-07;30 | |||
|ontology_enrichment_disease=DOID:305!3.15e-20!106;DOID:0050687!5.41e-17!143;DOID:162!8.50e-08!235;DOID:14566!7.87e-07!239 | |ontology_enrichment_disease=DOID:305!3.15e-20!106;DOID:0050687!5.41e-17!143;DOID:162!8.50e-08!235;DOID:14566!7.87e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:305;1.31e-07;106!DOID:299;4.18e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.22e-20,106;DOID:0050687,1.96e-16,143;DOID:299,3.81e-07,25;DOID:162,4.89e-07,235 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.35e-15;32!UBERON:0002619;2.89e-15;22!UBERON:0000956;1.02e-14;25!UBERON:0000203;1.02e-14;25!UBERON:0001950;1.35e-14;20!UBERON:0003528;2.16e-14;34!UBERON:0002020;2.16e-14;34!UBERON:0002791;2.44e-14;32!UBERON:0001893;2.61e-14;34!UBERON:0002780;1.11e-12;41!UBERON:0001890;1.11e-12;41!UBERON:0000073;2.26e-11;53!UBERON:0002616;2.26e-11;53!UBERON:0004921;1.03e-08;33!UBERON:0000955;1.21e-08;68!UBERON:0001017;6.28e-08;75!UBERON:0001016;1.27e-07;83!UBERON:0000922;2.38e-07;49!UBERON:0005409;7.54e-07;22!UBERON:0007023;9.74e-07;114 | |||
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| ||
|short_description=p1@CAMSAP3 | |short_description=p1@CAMSAP3 | ||
}} | }} |
Latest revision as of 21:02, 24 September 2015
Short description: | p1@CAMSAP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAMSAP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000160298, ENST00000446248, NM_001080429, NM_020902, uc002mgu.3, uc002mgv.3_5end |
EntrezGene: | CAMSAP3 |
HGNC: | 29307 |
UniProt: | Q9P1Y5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.86e-21 | 253 |
endodermal cell | 3.53e-15 | 58 |
endo-epithelial cell | 5.90e-12 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.22e-20 | 106 |
cell type cancer | 1.96e-16 | 143 |
adenocarcinoma | 3.81e-07 | 25 |
cancer | 4.89e-07 | 235 |