FFCP PHASE1:Hg19::chr1:210111553..210111569,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:210111553..210111569,+ to FFCP PHASE1:Hg19::chr1:210111553..210111569,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=255928 | |EntrezGene=255928 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23143 | |HGNC=23143 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000367019_5end | |||
|cluster_id=chr1:210111553..210111569,+ | |||
|coexpression_cluster_id=C3935 | |||
|description=CAGE_peak_2_at_SYT14_5end | |||
|id=chr1:210111553..210111569,+ | |||
|ontology_enrichment_celltype=CL:0000133!3.72e-16!59;CL:0000221!1.55e-13!71;CL:0000333!3.03e-11!41;CL:0000055!1.46e-10!180;CL:0000147!1.54e-09!14;CL:0002319!7.96e-09!25;CL:0000075!3.40e-08!27;CL:0000148!4.64e-08!10;CL:0000541!4.64e-08!10;CL:0000710!8.40e-08!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.14e-12;10!CL:0000147;1.35e-11;14!CL:0000710;1.83e-08;20!CL:0002321;1.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.88e-12,10;CL:0000541,4.88e-12,10;CL:0000147,1.03e-11,14;CL:0000133,7.59e-11,59;CL:0000221,4.85e-09,72;CL:0000710,1.60e-08,20;CL:0000047,2.23e-07,8;CL:0000333,6.24e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.94e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.21e-41!94;UBERON:0001016!5.21e-41!94;UBERON:0005743!5.45e-39!86;UBERON:0001017!6.48e-37!82;UBERON:0000924!1.02e-30!173;UBERON:0006601!1.02e-30!173;UBERON:0001049!2.47e-30!57;UBERON:0005068!2.47e-30!57;UBERON:0006241!2.47e-30!57;UBERON:0007135!2.47e-30!57;UBERON:0004121!7.41e-30!169;UBERON:0000955!1.58e-29!69;UBERON:0006238!1.58e-29!69;UBERON:0002616!1.31e-28!59;UBERON:0002346!3.84e-28!90;UBERON:0003075!1.82e-27!86;UBERON:0007284!1.82e-27!86;UBERON:0000033!6.46e-26!123;UBERON:0000153!7.25e-25!129;UBERON:0007811!7.25e-25!129;UBERON:0002780!4.45e-24!41;UBERON:0001890!4.45e-24!41;UBERON:0006240!4.45e-24!41;UBERON:0003056!6.10e-24!61;UBERON:0003080!4.28e-23!42;UBERON:0001893!1.27e-19!34;UBERON:0002020!1.53e-19!34;UBERON:0003528!1.53e-19!34;UBERON:0002791!5.66e-19!33;UBERON:0001869!1.47e-18!32;UBERON:0000956!5.56e-15!25;UBERON:0000203!5.56e-15!25;UBERON:0001950!5.59e-15!20;UBERON:0002619!2.44e-14!22;UBERON:0000119!1.26e-12!312;UBERON:0000483!2.31e-12!309;UBERON:0000475!3.39e-11!365;UBERON:0000025!2.44e-10!194;UBERON:0000477!3.74e-09!286;UBERON:0000468!1.12e-08!659;UBERON:0004111!1.36e-08!241;UBERON:0003076!2.39e-08!15;UBERON:0003057!2.39e-08!15;UBERON:0000467!9.92e-08!625;UBERON:0000480!1.28e-07!626;UBERON:0007023!7.61e-07!115;UBERON:0004733!7.82e-07!12;UBERON:0002028!7.82e-07!12;UBERON:0007277!7.82e-07!12;UBERON:0000922!9.42e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.54e-21;20!UBERON:0002619;8.00e-21;22!UBERON:0002780;3.20e-19;41!UBERON:0001890;3.20e-19;41!UBERON:0001893;3.79e-19;34!UBERON:0000073;4.83e-19;53!UBERON:0002616;4.83e-19;53!UBERON:0003528;5.63e-19;34!UBERON:0002020;5.63e-19;34!UBERON:0001869;1.75e-18;32!UBERON:0002791;5.85e-18;32!UBERON:0000956;1.25e-17;25!UBERON:0000203;1.25e-17;25!UBERON:0001016;8.75e-14;83!UBERON:0001017;2.89e-13;75!UBERON:0000955;4.39e-12;68!UBERON:0001871;1.89e-08;6!UBERON:0000200;4.49e-08;6!UBERON:0003296;4.12e-07;4!UBERON:0010133;4.12e-07;4!UBERON:0004733;5.49e-07;12!UBERON:0002028;5.49e-07;12!UBERON:0001872;7.43e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.10e-41,89;UBERON:0001017,8.19e-38,81;UBERON:0001049,1.21e-34,56;UBERON:0005068,1.21e-34,56;UBERON:0006241,1.21e-34,56;UBERON:0007135,1.21e-34,56;UBERON:0000073,4.09e-32,53;UBERON:0002616,4.09e-32,53;UBERON:0000955,3.20e-29,68;UBERON:0006238,3.20e-29,68;UBERON:0003075,2.55e-27,82;UBERON:0007284,2.55e-27,82;UBERON:0002346,7.30e-27,86;UBERON:0004121,1.14e-26,171;UBERON:0000924,1.14e-26,171;UBERON:0006601,1.14e-26,171;UBERON:0002780,2.82e-26,41;UBERON:0001890,2.82e-26,41;UBERON:0003080,2.82e-26,41;UBERON:0006240,2.82e-26,41;UBERON:0010371,1.32e-24,104;UBERON:0001893,2.60e-22,34;UBERON:0003528,3.37e-22,34;UBERON:0002020,3.37e-22,34;UBERON:0001950,1.73e-21,20;UBERON:0003056,4.12e-21,61;UBERON:0002619,5.79e-21,22;UBERON:0001869,1.20e-20,32;UBERON:0002791,1.52e-20,32;UBERON:0000956,9.42e-18,25;UBERON:0000203,9.42e-18,25;UBERON:0010314,2.20e-17,132;UBERON:0011216,1.21e-11,223;UBERON:0007023,1.52e-10,114;UBERON:0003076,2.06e-09,15;UBERON:0003057,2.06e-09,15;UBERON:0001871,2.12e-08,6;UBERON:0000200,2.62e-08,6;UBERON:0000025,2.20e-07,192;UBERON:0003296,4.37e-07,4;UBERON:0010133,4.37e-07,4;UBERON:0004733,4.41e-07,12;UBERON:0002028,4.41e-07,12;UBERON:0007277,4.41e-07,12;UBERON:0001872,5.59e-07,5;UBERON:0002298,7.92e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0.123121058076788,0.204000691244253,0.313454721478088,0.85870796139317,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.175669571386252,1.17881167947941,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,1.25849830862972,0.825354125820202,0,1.29208379584664,1.77883131343355,1.67360306382335,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,1.77282716330412,0.794455084879313,2.0078563452417,0,0,1.06748995729705,0.74000264525148,0,0.808264032418128,1.30769522490767,0.151357427644931,0,0.468642863667593,0,0.570471821544449,0.149448680551801,0,0,0,0,0.245668634623536,0.206651562351531,0,0,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0.30648779579902,0,0.794025282120147,0.358779271377724,0.213557388818567,1.27159140695737,2.10063767259082,0.92747276314595,0,0,1.85653965465393,4.28722822709274,0.504867548488229,0.184099797284599,0.969876340912871,1.06502877754984,0.705264687593482,1.18692414617341,0,0.272746120590835,0,3.17131635936948,2.78312513475119,1.97529702878181,1.24393266018445,1.51392510525377,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0.171567810298526,1.75600456653801,0,0,0,3.58389135841357,0,0,0.231860809950154,0.469634776943287,0.144366447761074,0,0.380508304469197,0,0,0,0,0,2.81201501960331,0.335964256397719,0.141775097242386,1.25381931783988,2.03443756959773,0.383382679165211,0,0,0,0,0,6.85777258355426,5.34783795781589,1.17217447210047,1.71072446022705,5.65551209868279,9.91132090884928,6.28818151787272,0.560655421726804,0,0.7333828582095,5.42941206182667,0,0,1.59562869950922,1.04007436911366,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.958499421966331,0,0,2.60606352001643,0.821905290201534,6.62525563987614,0,0,0,0,3.81141936333695,2.60279707715243,3.86644406388848,1.17261385734044,0.637938751653163,0,0,0,0,0,0.542530047399471,2.07970861530807,3.21172179834891,1.89242898040722,0.702848489956279,0.300946099727719,0,0,0.664225598535437,0.368738337083406,2.69339204851057,0.195801157462741,0.343143423810856,0,0,0,1.5156378572313,0,0.604780586659361,0,0.153461973288062,0,0.256278298511402,1.02341449813341,0,0,0,0,0.328508624055237,0,0.116210378459959,0,0,0,0.574072240823034,0.546273504020151,0.917870904715969,1.35359883872224,1.5403067420883,0,0,1.68882606228601,0,0,0.647747748306418,0,0,0.501689773854853,0,0.831076008928724,0.671624264166535,0,0,1.79515087581472,0.656029291399411,6.50756789328606,0,0,0,0,0,0,0.580024309752732,0,0.307007349452259,0.275673144969061,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,3.1481234683064,0,0,0.532306030317022,0.869932992075073,0.74129687641568,0.143124886741991,2.60510858551767,0.316379424718726,0.190630193923825,0,0,0.95460974377781,0,0.359744915166629,0,0,0.202182481573316,0,0.842516912477962,0,0,0,0.272999822815972,0,0,1.65409603063837,0,0,0,3.27947376023316,0,0,0.845086807596724,0.143411352204052,0.0982490410131212,0.35667105148125,0.354761064070598,0.211107635297664,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.0947307065254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,1.9882952955326,3.37606599385231,2.44879151050393,0,0,0,0,0,14.0108095027952,0,0,0,0,0,0,0,0,2.90799823828566,1.85536196323703,0,0,0,0,0,0,0,4.48166385213904,0,5.03512485306548,2.65722415744152,1.4471572635049,1.52581736317083,7.07707263559838,3.54657142744257,1.97446857438575,0,0,0,0.341826167541004,0,0,0.217294743844016,0.31900115973192,0.824378340616761,0,0,0,0,0,0,0,0,0,3.58696709697646,0.652931232636591,0,0,0,0,0.611030144933625,0.296521128680622,0,0.104421949505455,1.55022605855557,0,0.702793337176017,0,0.391329237864179,0,0,1.20990716048664,2.14250933141343,0.379119477770928,5.41164309892173,0.829505531177977,0,0,0,0,1.99226682220855,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,2.74083849293502,1.19228767021794,3.67202616544096,0,0,0.213452994739353,0,0,0,16.6447147926106,0,0,0,0.271808412147228,0.523014231561666,0.203996435272644,0,0.600420288709789,1.77976992559591,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,1.49823746722733,1.28602518772015,3.57602535152808,2.07720169014593,0,0,3.03747783290123,0,0,0.157363764404994,0,0,0,0,0,0,1.08599920350743,1.72844298240254,0,5.98650957812437,0,0.170388021785422,0.226624183040251,0,0,1.68067843270016,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,2.65820453990096,3.90484047686282,4.50687350543399,1.14681839138014,1.88579387612649,2.2354705058898,0.276697269872462,0,2.27473676312472,5.70930667089935,0,0.936669811613763,1.30428925749743,0,0,0,0,0,0,0.686520205190771,0.15123092376323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| ||
|short_description=p2@SYT14 | |||
}} | }} |
Latest revision as of 21:21, 24 September 2015
Short description: | p2@SYT14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYT14_5end |
Coexpression cluster: | C3935_Wilms_pituitary_pineal_cerebellum_serous_gastrointestinal_neuroblastoma |
Association with transcript: | -6bp_to_ENST00000367019_5end |
EntrezGene: | SYT14 |
HGNC: | 23143 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.88e-12 | 10 |
melanoblast | 4.88e-12 | 10 |
pigment cell | 1.03e-11 | 14 |
neurectodermal cell | 7.59e-11 | 59 |
ectodermal cell | 4.85e-09 | 72 |
neurecto-epithelial cell | 1.60e-08 | 20 |
neuronal stem cell | 2.23e-07 | 8 |
migratory neural crest cell | 6.24e-07 | 41 |