FFCP PHASE1:Hg19::chr2:220492674..220492712,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6508 | |EntrezGene=6508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11029 | |HGNC=11029 | ||
|TSSclassifier=strong | |||
|UniProt=B4DR53,P48751 | |UniProt=B4DR53,P48751 | ||
|association_with_transcript=0bp_to_AB384869,AK299109,BC136384,BC171760,U05596_5end | |association_with_transcript=0bp_to_AB384869,AK299109,BC136384,BC171760,U05596_5end | ||
|cluster_id=chr2:220492674..220492712,+ | |||
|coexpression_cluster_id=C56 | |coexpression_cluster_id=C56 | ||
|description=CAGE_peak_6_at_SLC4A3_5end | |description=CAGE_peak_6_at_SLC4A3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;7.05e-11;1!UBERON:0004140;7.05e-11;1!UBERON:0000358;1.30e-10;1!UBERON:0010226;2.62e-10;1!UBERON:0005062;2.68e-10;4!UBERON:0007284;2.68e-10;4 | |ontology_enrichment_development_v019=UBERON:0010227;7.05e-11;1!UBERON:0004140;7.05e-11;1!UBERON:0000358;1.30e-10;1!UBERON:0010226;2.62e-10;1!UBERON:0005062;2.68e-10;4!UBERON:0007284;2.68e-10;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.08e-19;2!DOID:178;1.13e-10;1!DOID:326;1.13e-10;1!DOID:3978;1.13e-10;1!DOID:3394;1.13e-10;1!DOID:5844;1.13e-10;1!DOID:1287;2.56e-10;4 | |ontology_enrichment_disease_v019=DOID:114;1.08e-19;2!DOID:178;1.13e-10;1!DOID:326;1.13e-10;1!DOID:3978;1.13e-10;1!DOID:3394;1.13e-10;1!DOID:5844;1.13e-10;1!DOID:1287;2.56e-10;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,1.13e-19,2;DOID:178,1.19e-10,1;DOID:326,1.19e-10,1;DOID:3978,1.19e-10,1;DOID:3394,1.19e-10,1;DOID:5844,1.19e-10,1;DOID:1287,2.62e-10,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;7.29e-23;25!UBERON:0003296;1.01e-20;4!UBERON:0010133;1.01e-20;4!UBERON:0000007;7.14e-19;2!UBERON:0002298;5.04e-14;6!UBERON:0003978;1.99e-13;3!UBERON:0000946;1.99e-13;3!UBERON:0004151;2.79e-13;3!UBERON:0000988;6.55e-13;3!UBERON:0004733;3.59e-12;12!UBERON:0002028;3.59e-12;12!UBERON:0001894;4.20e-12;7!UBERON:0004732;2.99e-11;13!UBERON:0002079;7.05e-11;1!UBERON:0002146;9.82e-11;1!UBERON:0005623;9.82e-11;1!UBERON:0002135;1.13e-10;1!UBERON:0000948;1.78e-10;22!UBERON:0002084;2.62e-10;1!UBERON:0002082;2.62e-10;1!UBERON:0002680;1.56e-09;9!UBERON:0001895;1.56e-09;9!UBERON:0000073;1.07e-07;53!UBERON:0002616;1.07e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0007100;7.29e-23;25!UBERON:0003296;1.01e-20;4!UBERON:0010133;1.01e-20;4!UBERON:0000007;7.14e-19;2!UBERON:0002298;5.04e-14;6!UBERON:0003978;1.99e-13;3!UBERON:0000946;1.99e-13;3!UBERON:0004151;2.79e-13;3!UBERON:0000988;6.55e-13;3!UBERON:0004733;3.59e-12;12!UBERON:0002028;3.59e-12;12!UBERON:0001894;4.20e-12;7!UBERON:0004732;2.99e-11;13!UBERON:0002079;7.05e-11;1!UBERON:0002146;9.82e-11;1!UBERON:0005623;9.82e-11;1!UBERON:0002135;1.13e-10;1!UBERON:0000948;1.78e-10;22!UBERON:0002084;2.62e-10;1!UBERON:0002082;2.62e-10;1!UBERON:0002680;1.56e-09;9!UBERON:0001895;1.56e-09;9!UBERON:0000073;1.07e-07;53!UBERON:0002616;1.07e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.57e-21,27;UBERON:0003296,1.05e-20,4;UBERON:0010133,1.05e-20,4;UBERON:0000007,4.96e-19,2;UBERON:0007023,1.77e-15,114;UBERON:0002298,4.31e-14,6;UBERON:0003978,1.93e-13,3;UBERON:0009751,1.93e-13,3;UBERON:0004151,1.93e-13,3;UBERON:0000946,1.93e-13,3;UBERON:0002523,1.93e-13,3;UBERON:0005983,1.93e-13,3;UBERON:0002165,1.93e-13,3;UBERON:0002062,1.93e-13,3;UBERON:0007280,1.93e-13,3;UBERON:0000988,4.56e-13,3;UBERON:0004733,3.39e-12,12;UBERON:0002028,3.39e-12,12;UBERON:0007277,3.39e-12,12;UBERON:0001894,4.29e-12,7;UBERON:0006222,4.29e-12,7;UBERON:0003075,2.17e-11,82;UBERON:0007284,2.17e-11,82;UBERON:0004732,2.83e-11,13;UBERON:0010314,4.78e-11,132;UBERON:0002079,7.40e-11,1;UBERON:0002346,8.68e-11,86;UBERON:0002146,9.84e-11,1;UBERON:0005623,9.84e-11,1;UBERON:0002135,1.08e-10,1;UBERON:0002084,1.43e-10,1;UBERON:0002082,1.43e-10,1;UBERON:0010226,1.43e-10,1;UBERON:0003076,8.51e-10,15;UBERON:0003057,8.51e-10,15;UBERON:0003103,8.72e-10,68;UBERON:0000948,1.21e-09,24;UBERON:0005498,1.21e-09,24;UBERON:0004140,1.21e-09,24;UBERON:0009881,1.21e-09,24;UBERON:0004141,1.21e-09,24;UBERON:0003084,1.21e-09,24;UBERON:0007005,1.21e-09,24;UBERON:0004139,1.21e-09,24;UBERON:0004291,1.21e-09,24;UBERON:0000073,1.35e-09,53;UBERON:0002616,1.35e-09,53;UBERON:0002680,1.37e-09,9;UBERON:0001895,1.37e-09,9;UBERON:0010092,1.37e-09,9;UBERON:0001049,4.87e-09,56;UBERON:0005068,4.87e-09,56;UBERON:0006241,4.87e-09,56;UBERON:0007135,4.87e-09,56;UBERON:0010371,1.21e-08,104;UBERON:0000955,3.55e-07,68;UBERON:0006238,3.55e-07,68;UBERON:0000025,7.38e-07,192 | |||
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|short_description=p6@SLC4A3 | |short_description=p6@SLC4A3 | ||
}} | }} |
Latest revision as of 22:27, 24 September 2015
Short description: | p6@SLC4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC4A3_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 0bp_to_AB384869, AK299109, BC136384, BC171760, U05596_5end |
EntrezGene: | SLC4A3 |
HGNC: | 11029 |
UniProt: | B4DR53P48751 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.13e-19 | 2 |
vascular disease | 1.19e-10 | 1 |
ischemia | 1.19e-10 | 1 |
extrinsic cardiomyopathy | 1.19e-10 | 1 |
myocardial ischemia | 1.19e-10 | 1 |
myocardial infarction | 1.19e-10 | 1 |
cardiovascular system disease | 2.62e-10 | 4 |