FFCP PHASE1:Hg19::chr5:139422833..139422898,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9542 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7998 | |||
|TSSclassifier=strong | |||
|UniProt=O14511,C9JYE1,F5GZS7,F5H4G2,F5H0N2 | |||
|association_with_transcript=0bp_to_ENST00000361474,ENST00000394770,ENST00000446269,ENST00000541337,ENST00000544729,ENST00000545385,NM_001184935,NM_004883,NM_013981,NM_013982,NM_013983,uc003lev.1,uc003lew.1,uc003lex.1,uc003ley.1_5end | |||
|cluster_id=chr5:139422833..139422898,- | |||
|coexpression_cluster_id=C2673 | |||
|description=CAGE_peak_1_at_NRG2_5end | |||
|id=chr5:139422833..139422898,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.25e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.30e-37!115;UBERON:0000073!2.34e-37!94;UBERON:0001016!2.34e-37!94;UBERON:0005743!4.33e-36!86;UBERON:0001017!1.31e-34!82;UBERON:0001049!4.94e-34!57;UBERON:0005068!4.94e-34!57;UBERON:0006241!4.94e-34!57;UBERON:0007135!4.94e-34!57;UBERON:0003075!4.21e-33!86;UBERON:0007284!4.21e-33!86;UBERON:0002346!1.20e-30!90;UBERON:0000955!1.82e-30!69;UBERON:0006238!1.82e-30!69;UBERON:0002616!6.68e-28!59;UBERON:0004121!3.99e-27!169;UBERON:0000924!7.82e-26!173;UBERON:0006601!7.82e-26!173;UBERON:0003080!1.91e-25!42;UBERON:0002780!9.79e-25!41;UBERON:0001890!9.79e-25!41;UBERON:0006240!9.79e-25!41;UBERON:0003056!2.00e-24!61;UBERON:0000033!3.89e-24!123;UBERON:0000153!1.19e-23!129;UBERON:0007811!1.19e-23!129;UBERON:0002020!2.06e-20!34;UBERON:0003528!2.06e-20!34;UBERON:0001893!2.21e-20!34;UBERON:0002791!9.91e-20!33;UBERON:0001869!2.70e-19!32;UBERON:0000956!1.42e-16!25;UBERON:0000203!1.42e-16!25;UBERON:0002619!8.59e-15!22;UBERON:0001950!1.39e-13!20;UBERON:0000475!1.64e-12!365;UBERON:0000481!1.59e-10!347;UBERON:0000025!5.28e-10!194;UBERON:0000064!1.24e-09!219;UBERON:0003076!1.30e-09!15;UBERON:0003057!1.30e-09!15;UBERON:0004111!1.42e-09!241;UBERON:0000483!1.88e-09!309;UBERON:0000477!1.89e-09!286;UBERON:0000119!3.77e-09!312;UBERON:0000062!1.88e-08!511;UBERON:0004732!2.74e-08!13;UBERON:0004733!9.31e-08!12;UBERON:0002028!9.31e-08!12;UBERON:0007277!9.31e-08!12;UBERON:0000480!3.27e-07!626;UBERON:0000467!3.94e-07!625;UBERON:0000922!4.07e-07!612;UBERON:0002050!9.62e-07!605;UBERON:0005423!9.62e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.24e-27;41!UBERON:0001890;2.24e-27;41!UBERON:0003528;2.39e-27;34!UBERON:0002020;2.39e-27;34!UBERON:0002791;3.23e-27;32!UBERON:0001869;3.77e-27;32!UBERON:0001893;4.77e-27;34!UBERON:0000073;8.81e-27;53!UBERON:0002616;8.81e-27;53!UBERON:0000956;1.75e-25;25!UBERON:0000203;1.75e-25;25!UBERON:0002619;1.24e-22;22!UBERON:0001950;1.08e-20;20!UBERON:0000955;1.15e-19;68!UBERON:0001016;1.37e-19;83!UBERON:0001017;3.06e-19;75!UBERON:0007023;3.90e-12;114!UBERON:0004732;2.19e-09;13!UBERON:0004733;1.24e-08;12!UBERON:0002028;1.24e-08;12!UBERON:0002420;3.38e-08;9!UBERON:0007245;3.38e-08;9!UBERON:0010009;3.38e-08;9!UBERON:0010011;3.38e-08;9!UBERON:0000454;3.38e-08;9!UBERON:0000125;4.54e-08;9!UBERON:0002308;4.54e-08;9!UBERON:0011216;1.42e-07;132!UBERON:0001871;2.58e-07;6!UBERON:0000200;5.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.81e-49,89;UBERON:0001049,5.72e-48,56;UBERON:0005068,5.72e-48,56;UBERON:0006241,5.72e-48,56;UBERON:0007135,5.72e-48,56;UBERON:0007023,2.44e-46,114;UBERON:0001017,3.71e-46,81;UBERON:0000073,7.90e-45,53;UBERON:0002616,7.90e-45,53;UBERON:0003075,6.75e-42,82;UBERON:0007284,6.75e-42,82;UBERON:0000955,6.86e-42,68;UBERON:0006238,6.86e-42,68;UBERON:0002346,6.67e-39,86;UBERON:0002780,3.14e-37,41;UBERON:0001890,3.14e-37,41;UBERON:0003080,3.14e-37,41;UBERON:0006240,3.14e-37,41;UBERON:0003056,7.69e-33,61;UBERON:0003528,6.37e-32,34;UBERON:0002020,6.37e-32,34;UBERON:0001893,7.10e-32,34;UBERON:0010371,1.54e-31,104;UBERON:0001869,3.80e-30,32;UBERON:0002791,5.33e-30,32;UBERON:0004121,1.19e-27,171;UBERON:0000924,1.19e-27,171;UBERON:0006601,1.19e-27,171;UBERON:0010314,1.76e-27,132;UBERON:0000956,2.44e-25,25;UBERON:0000203,2.44e-25,25;UBERON:0002619,1.65e-22,22;UBERON:0011216,2.22e-21,223;UBERON:0001950,1.36e-20,20;UBERON:0003076,1.26e-11,15;UBERON:0003057,1.26e-11,15;UBERON:0000025,5.82e-10,192;UBERON:0004732,1.32e-09,13;UBERON:0004733,8.76e-09,12;UBERON:0002028,8.76e-09,12;UBERON:0007277,8.76e-09,12;UBERON:0004111,2.17e-08,240;UBERON:0002420,2.81e-08,9;UBERON:0007245,2.81e-08,9;UBERON:0010009,2.81e-08,9;UBERON:0010011,2.81e-08,9;UBERON:0000454,2.81e-08,9;UBERON:0000125,4.84e-08,9;UBERON:0002308,4.84e-08,9;UBERON:0001871,3.63e-07,6;UBERON:0002298,5.61e-07,6;UBERON:0000200,8.09e-07,6;UBERON:0000349,8.68e-07,5 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,1.89515962028049,1.04474251279935,0,0,0,0,0,0,0,0,0,0,1.10808952269109,0.612002073732759,0.626909442956176,3.43483184557268,2.46373965131192,4.3939923858181,4.81404456212093,5.17233713534658,3.38456359648821,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,0,0,0,1.32348744029695,0.221729397462564,0.527008714158756,1.44076983047484,1.82147644146271,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0.367663080345869,0,0.625098097988558,0.673588117878509,0.337834441449967,1.53316637465883,0.949265659568129,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0.311211035399766,0.134710672069688,0,0,0,0.234321431833797,2.18512053781224,2.2818872861778,0.597794722207204,0,0,0,1.22492502752936,0.859840221182376,1.54988671763648,0,0.494533858557114,0,0,0.505008341862199,0.375355559615893,1.10825646193673,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0.386521706326594,0,0,0,0.132529768321485,0.813357600086629,0,0.252320850875628,0,1.56449532329816,1.28648187638577,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,3.69077727312324,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0,0,0,0,0,3.36198174427723,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0.871901815541886,0.766765358330422,0,0,0.414656231081544,0,0.12624243342638,0.507983154337352,3.81988425558278,5.86087236050235,1.71072446022705,0.719792448923265,0,0.571652865261156,0.112131084345361,0,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0.289562613335158,0.61642896765115,0.358121926479791,0,0,0,0,9.65559572045361,1.30139853857622,2.31986643833309,2.01019518401218,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0.173767228936166,0.391602314925481,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,1.14978018419333,0,0.464841513839837,0,0,0,0,0,0.131124414959424,0.451199612907412,0.0770153371044148,0.784349769176855,1.46139224653261,0.422206515571503,2.27466768141793,0.680374821106063,0,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,1.28225062558195,0.984043937099117,0.650756789328606,0.206082023295445,0.183138929636687,0.165018999841176,0,0,0,0,0.462145851343933,0,0,0,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,1.54016790088044,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,1.13841952129715,1.04980416073495,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,1.92495971052672,0.245040215981032,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,5.71381899160387,2.6699314784893,0,3.97790605528978,0,0.296964680832639,0,3.97659059106519,4.3607519087259,1.55832187032068,0,0,2.59022384726391,2.21027132424918,0,2.35217969754956,1.35393286007176,0,0,0.179021174675609,0,1.08507746200627,0,0,4.84666373047609,1.85536196323703,9.98068990005971,0,0,4.34999745260876,0,0,0,0.344743373241465,0,0,0,9.165329335531,15.2581736317083,33.5055157591611,23.3482618973303,2.85201016300164,0.10893846351899,0,0.923403102045565,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.26598838716816,0,0,0,0.995261931078505,2.38835424159016,1.83309043480088,1.48260564340311,3.58335422944858,2.71497068714184,2.69604531922708,0.802577647298789,1.63985112007737,0,0.391329237864179,2.18502341580683,0,1.20990716048664,3.36680037793539,1.20054501294127,2.55549813004637,1.34794648816421,2.65861549082874,1.65495977937749,0.627865836814451,1.19472429772959,0,0,0,0,0,0.17472666824203,2.23581842213102,0,0,0,0.969890164884194,0,2.03382666702479,1.37041924646751,3.7755776223568,3.48209377757333,0,0,3.41524791582964,0.39961921916426,0,0.458146384663663,0.171594997861965,0.14405479798815,1.24252535565433,0,1.08723364858891,1.77824838730966,0.611989305817931,0,1.80126086612937,3.28572909340783,0,2.57859264851974,0,1.39641200636127,2.97908551215189,0,2.39614800598789,6.86761677018513,2.23171457441873,0.134366944973453,0,0,0,0,0,3.54338933453096,1.35477331305255,2.38568906942791,5.17572943223987,0.160753148465019,0.275078873194468,0,0,0,4.00947073942963,0,0.394028536495991,0.681909645754975,1.26720403823288,4.30289614398828,0,0.714695326373367,1.32418394073086,0,0,0,0.326587360109409,0,0,0.5111640653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| |||
|short_description=p1@NRG2 | |||
}} |
Latest revision as of 01:12, 25 September 2015
Short description: | p1@NRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRG2_5end |
Coexpression cluster: | C2673_cerebellum_small_pineal_retinoblastoma_retina_eye_neuroblastoma |
Association with transcript: | 0bp_to_ENST00000361474, ENST00000394770, ENST00000446269, ENST00000541337, ENST00000544729, ENST00000545385, NM_001184935, NM_004883, NM_013981, NM_013982, NM_013983, uc003lev.1, uc003lew.1, uc003lex.1, uc003ley.1_5end |
EntrezGene: | NRG2 |
HGNC: | 7998 |
UniProt: | O14511C9JYE1F5GZS7F5H4G2F5H0N2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data