FFCP PHASE1:Hg19::chr8:116681247..116681261,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:116681247..116681261,-
|short_description=p8@TRPS1
|description=CAGE_peak_8_at_TRPS1_5end
|association_with_transcript=-19bp_to_ENST00000395715,NM_014112,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7227 | |EntrezGene=7227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12340 | |HGNC=12340 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHF7 | |UniProt=Q9UHF7 | ||
|association_with_transcript=-19bp_to_ENST00000395715,NM_014112,uc003yny.2,uc003ynz.2,uc010mcy.2_5end | |||
|cluster_id=chr8:116681247..116681261,- | |||
|coexpression_cluster_id=C2914 | |||
|description=CAGE_peak_8_at_TRPS1_5end | |||
|id=chr8:116681247..116681261,- | |||
|ontology_enrichment_celltype=CL:0002057!2.77e-17!42;CL:0002009!1.01e-14!65;CL:0000860!1.56e-14!45;CL:0002194!3.34e-14!63;CL:0000576!3.34e-14!63;CL:0000040!3.34e-14!63;CL:0000559!3.34e-14!63;CL:0000557!5.10e-13!71;CL:0000839!5.87e-12!70;CL:0000766!2.50e-10!76;CL:0000763!5.65e-07!112;CL:0000049!5.65e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.83e-23;33!CL:0002057;3.83e-23;33!CL:0000473;1.71e-18;39!CL:0000234;1.71e-18;39!CL:0000576;1.01e-14;48!CL:0000766;3.44e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.34e-20,42;CL:0002057,1.34e-20,42;CL:0000473,3.60e-20,48;CL:0000234,3.60e-20,48;CL:0002009,3.28e-19,61;CL:0002194,3.76e-19,59;CL:0000576,3.76e-19,59;CL:0000040,3.76e-19,59;CL:0000559,3.76e-19,59;CL:0000557,3.01e-16,67;CL:0000839,1.10e-15,66;CL:0000766,4.62e-14,72;CL:0000763,1.30e-08,108;CL:0000049,1.30e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.70e-15;42!UBERON:0006601;2.96e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.37e-22!115;UBERON:0001049!2.18e-21!57;UBERON:0005068!2.18e-21!57;UBERON:0006241!2.18e-21!57;UBERON:0007135!2.18e-21!57;UBERON:0002616!1.59e-18!59;UBERON:0003080!4.79e-17!42;UBERON:0002780!2.22e-16!41;UBERON:0001890!2.22e-16!41;UBERON:0006240!2.22e-16!41;UBERON:0000955!1.00e-13!69;UBERON:0006238!1.00e-13!69;UBERON:0001017!1.11e-13!82;UBERON:0002020!2.07e-13!34;UBERON:0003528!2.07e-13!34;UBERON:0001893!3.92e-13!34;UBERON:0005743!4.21e-13!86;UBERON:0002791!6.60e-13!33;UBERON:0000062!8.23e-13!511;UBERON:0001869!3.70e-12!32;UBERON:0003075!1.42e-11!86;UBERON:0007284!1.42e-11!86;UBERON:0001474!1.42e-11!86;UBERON:0004765!1.81e-11!101;UBERON:0001434!1.81e-11!101;UBERON:0000073!2.34e-11!94;UBERON:0001016!2.34e-11!94;UBERON:0002346!1.32e-10!90;UBERON:0002371!2.76e-10!80;UBERON:0000033!2.16e-09!123;UBERON:0002619!2.18e-09!22;UBERON:0000153!3.62e-09!129;UBERON:0007811!3.62e-09!129;UBERON:0000956!9.24e-09!25;UBERON:0000203!9.24e-09!25;UBERON:0003056!1.33e-08!61;UBERON:0001950!3.13e-08!20;UBERON:0004121!7.37e-07!169;UBERON:0000468!8.12e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.08e-16;41!UBERON:0001890;1.08e-16;41!UBERON:0001893;2.88e-15;34!UBERON:0003528;3.60e-15;34!UBERON:0002020;3.60e-15;34!UBERON:0002791;1.04e-14;32!UBERON:0001869;1.19e-14;32!UBERON:0000073;1.52e-14;53!UBERON:0002616;1.52e-14;53!UBERON:0002619;7.08e-13;22!UBERON:0001950;4.63e-11;20!UBERON:0000956;1.16e-10;25!UBERON:0000203;1.16e-10;25!UBERON:0002420;1.05e-09;9!UBERON:0007245;1.05e-09;9!UBERON:0010009;1.05e-09;9!UBERON:0010011;1.05e-09;9!UBERON:0000454;1.05e-09;9!UBERON:0000125;1.89e-09;9!UBERON:0002308;1.89e-09;9!UBERON:0001017;4.47e-09;75!UBERON:0000955;3.47e-08;68!UBERON:0007023;1.02e-07;114!UBERON:0009663;1.18e-07;7!UBERON:0001894;4.02e-07;7!UBERON:0001016;4.58e-07;83!UBERON:0002298;8.60e-07;6 | |||
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|phase1_expression=0,0,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0.522371256399677,0,0,0.218441372130172,0.263766978228454,2.10402800032079,0.662794751455832,0.672325146451775,0,0,0,0.246242116153576,0.204000691244253,0,0.85870796139317,0.273748850145768,0.125542639594803,0,0,0,0,0.767658796194425,1.23852898652861,0,0,0,0.0774672005803016,0.284338464974843,0,1.66198622559563,1.40381113229099,0.651032612147555,2.91090116511902,3.56283032620878,3.8636335145128,3.92575244704825,1.88937971844405,2.66842467306598,4.88100977501938,2.87817521615278,0.929119112685311,7.48000220037591,6.91633907628572,8.27687804610048,3.44745680736619,2.5819387343353,6.77132432971709,3.01187743268168,2.45615535052061,2.24723484445085,6.42776173978895,4.8139354061414,1.91801137739712,3.29851300186716,4.18873681005427,3.83602275479425,3.19230162491442,5.10646702222026,2.4912889959823,8.03995728821578,7.30076085788282,6.95004303056373,2.42159801053347,1.84138817993782,2.84816148696796,0.633765858935825,0.637812899895131,0.209658645508376,0.673971786878971,1.05123824989054,0.964353520182481,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0.196709770113833,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,0,0.267440195783507,0.289648807765598,4.87613732627923,0,0.511450247374121,1.44575660953827,0,0.724232594804119,3.1811437882044,7.29952305453954,0.567208902984407,0.221729397462564,0.263504357079378,1.37528029272598,0,0,0.649094787309367,0.174129737299267,0.132957960518865,0.238490624305342,0,0.74291500265913,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,1.06400514659507,0,0,0.49333509683432,1.8672662123986,0.134710672069688,0,0.605429710579726,1.15235184896,0,0.312160076830321,0.570471821544449,0.298897361103602,0.587172493218824,0.647491777472526,0.140450806702248,0.408308342509787,0.368502951935304,1.34323515528495,1.18800285728205,0.247266929278557,0,0,0.673344455816265,0.750711119231785,0.277064115484183,0.438977620880838,0,0.300476117813194,0.226864366320042,1.07633781413317,2.34913127700424,0.635795703478686,0.300091096084402,0.92747276314595,1.28820270022815,0.744467425326359,0.843881661206331,0.194874010322397,0.757301322732344,0.920498986422993,0.161646056818812,1.42003837006646,0.403008392910561,0,0.773043412653187,0.272746120590835,0.286804595389004,0.121973706129595,0.265059536642971,0,0.10366105501537,0,0.72995471815166,0,0.643240938192885,0,1.85747171212792,0.721879481669586,0,0.337169380156203,0,0.110293972732394,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.98775256867763,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.469634776943287,0,0,0,2.37061319387782,4.29243081047436,3.69325509131096,0.468008530278475,1.33768046059855,0,0,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0.414656231081544,0.720599767084807,0.25248486685276,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0.2933531432838,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.714889968290738,0,0,0,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,1.00451418286425,0,0.479249710983165,0,0,0.434343920002738,1.2328579353023,1.25342674267927,0,0.394061520403854,0.215627574859517,0.513372145118994,0.76228387266739,1.30139853857622,0,0.167516265334349,0,0,0,0,1.2269149171914,0.500170521059677,0.813795071099207,0.415941723061614,1.24900292158013,0.946214490203608,0.702848489956279,1.20378439891088,0,1.03473071292505,0.664225598535437,0.368738337083406,0.781952530212746,0.587403472388222,0,0.620304078368662,0.862856803274467,0.320182673410333,0,0,0,0.496215615637554,1.2276957863045,0,1.53766979106841,0.511707249066704,1.12597744800525,0,0.154209693802656,0.355123450626254,0.410635780069046,0.519254429183621,0.116210378459959,0,0.601519410909855,0.460404944679482,0,0.182091168006717,0.131124414959424,0,0.231046011313244,0,0,0,0,0,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.515205058238611,3.47963966309705,1.98022799809411,0,0,0,1.25671933779759,0.308097234229289,0.307007349452259,0.551346289938122,1.6113036730241,1.88521702088497,0.681813019328807,0.712256285173899,0,0.192190067365106,0.638063562472921,0.10115778085555,0,0.31481234683064,0,0,1.06461206063404,0.869932992075073,0,0.286249773483982,0,0.316379424718726,0.38126038784765,0.255897791311334,1.71175595213568,0.318203247925937,0,0.359744915166629,0.54907405947211,0.471249609382746,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.0982490410131212,0,0.354761064070598,0.844430541190656,0.329294892959902,0,0,0.0962221127255121,0,0,0.6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| ||
|short_description=p8@TRPS1 | |||
}} | }} |
Latest revision as of 06:43, 25 September 2015
Short description: | p8@TRPS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TRPS1_5end |
Coexpression cluster: | C2914_CD14_breast_small_spinal_osteosarcoma_skin_Macrophage |
Association with transcript: | -19bp_to_ENST00000395715, NM_014112, uc003yny.2, uc003ynz.2, uc010mcy.2_5end |
EntrezGene: | TRPS1 |
HGNC: | 12340 |
UniProt: | Q9UHF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.34e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.34e-20 | 42 |
defensive cell | 3.60e-20 | 48 |
phagocyte | 3.60e-20 | 48 |
macrophage dendritic cell progenitor | 3.28e-19 | 61 |
monopoietic cell | 3.76e-19 | 59 |
monocyte | 3.76e-19 | 59 |
monoblast | 3.76e-19 | 59 |
promonocyte | 3.76e-19 | 59 |
granulocyte monocyte progenitor cell | 3.01e-16 | 67 |
myeloid lineage restricted progenitor cell | 1.10e-15 | 66 |
myeloid leukocyte | 4.62e-14 | 72 |
myeloid cell | 1.30e-08 | 108 |
common myeloid progenitor | 1.30e-08 | 108 |