FFCP PHASE1:Mm9::chr7:107805371..107805382,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=27276|HGNC=|MCL_coexpression_id=20|UniProt=Q9QYE9|association_with_transcript=84bp_to_ENSMUST00000107046_5end|description=CAGE_peak_6_at_Plekhb1_5end|id=chr7:107805371..107805382,-|ontology_enrichment_celltype=CL:0000221!1.46e-13!44;CL:0000133!1.46e-13!44;CL:0002319!7.48e-13!43;CL:0000055!2.02e-09!50;CL:0000540!3.13e-09!33;CL:0000047!3.13e-09!33;CL:0000031!3.13e-09!33;CL:0000404!3.13e-09!33;CL:0000107!4.00e-08!9|ontology_enrichment_celltype_v019_2=CL:0000221,4.00e-18,44;CL:0000133,4.00e-18,44;CL:0000540,8.81e-18,33;CL:0000047,8.81e-18,33;CL:0000031,8.81e-18,33;CL:0000404,8.81e-18,33;CL:0002319,7.23e-17,43;CL:0000107,7.31e-15,9;CL:0000393,3.25e-14,39;CL:0000211,3.25e-14,39;CL:0002321,4.50e-09,70;CL:0002610,4.14e-07,3;CL:0002614,5.41e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.79e-29!102;UBERON:0000924!1.79e-29!102;UBERON:0006601!1.79e-29!102;UBERON:0000073!1.15e-25!75;UBERON:0001016!1.15e-25!75;UBERON:0001017!8.95e-25!73;UBERON:0005743!8.95e-25!73;UBERON:0000033!6.70e-18!63;UBERON:0002346!1.58e-16!71;UBERON:0003075!1.58e-16!71;UBERON:0007284!1.58e-16!71;UBERON:0001049!1.32e-13!52;UBERON:0005068!1.32e-13!52;UBERON:0006241!1.32e-13!52;UBERON:0007135!1.32e-13!52;UBERON:0000955!7.14e-13!50;UBERON:0006238!7.14e-13!50;UBERON:0002616!3.24e-12!49;UBERON:0002020!1.55e-11!34;UBERON:0003056!7.35e-10!49;UBERON:0007811!1.40e-09!86;UBERON:0002791!1.12e-08!29;UBERON:0003528!1.12e-08!29;UBERON:0001893!1.12e-08!29;UBERON:0000010!1.16e-08!11;UBERON:0003076!3.72e-08!12;UBERON:0003057!3.72e-08!12;UBERON:0002410!4.00e-08!9;UBERON:0002021!4.73e-08!10;UBERON:0000411!4.73e-08!10;UBERON:0001950!4.73e-08!10;UBERON:0000153!6.45e-08!94;UBERON:0002619!6.48e-08!17;UBERON:0003080!1.46e-07!40;UBERON:0002298!5.17e-07!6;UBERON:0002780!6.08e-07!39;UBERON:0001890!6.08e-07!39;UBERON:0006240!6.08e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.01e-42,73;UBERON:0001016,5.23e-41,75;UBERON:0004121,1.73e-38,95;UBERON:0000924,1.73e-38,95;UBERON:0006601,1.73e-38,95;UBERON:0002346,7.78e-25,64;UBERON:0003075,7.78e-25,64;UBERON:0007284,7.78e-25,64;UBERON:0000073,4.41e-24,54;UBERON:0010371,7.56e-24,73;UBERON:0001049,3.25e-21,52;UBERON:0005068,3.25e-21,52;UBERON:0006241,3.25e-21,52;UBERON:0007135,3.25e-21,52;UBERON:0010314,5.09e-17,92;UBERON:0000955,5.81e-17,47;UBERON:0006238,5.81e-17,47;UBERON:0002020,6.50e-16,34;UBERON:0002616,8.57e-16,46;UBERON:0002410,7.31e-15,9;UBERON:0002021,1.02e-14,10;UBERON:0000411,1.02e-14,10;UBERON:0001950,1.02e-14,10;UBERON:0003056,4.24e-12,49;UBERON:0003528,5.58e-12,29;UBERON:0002791,5.58e-12,29;UBERON:0001893,5.58e-12,29;UBERON:0003080,7.47e-12,40;UBERON:0000010,8.15e-12,11;UBERON:0003076,1.95e-11,12;UBERON:0003057,1.95e-11,12;UBERON:0011216,8.47e-11,194;UBERON:0002780,1.09e-10,39;UBERON:0001890,1.09e-10,39;UBERON:0006240,1.09e-10,39;UBERON:0002619,9.71e-10,17;UBERON:0000956,4.82e-09,21;UBERON:0001869,4.82e-09,21;UBERON:0000203,4.82e-09,21;UBERON:0002950,8.06e-09,4;UBERON:0001891,8.06e-09,4;UBERON:0009616,8.06e-09,4;UBERON:0010286,8.06e-09,4;UBERON:0002240,2.26e-07,6;UBERON:0005174,2.26e-07,6;UBERON:0001137,2.26e-07,6;UBERON:0004684,4.14e-07,3;UBERON:0002275,4.14e-07,3;UBERON:0002038,5.41e-07,3;UBERON:0009663,5.41e-07,3;UBERON:0009661,5.41e-07,3;UBERON:0000125,5.41e-07,3;UBERON:0002308,5.41e-07,3;UBERON:0004111,7.97e-07,122|phase1_expression=4.64431656603902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.388859798148567,0.699932108126813,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,3.29560121570245,9.22123932771731,0,0,0,8.85518051651791,8.83474163806454,0,0.0958454710182364,0,39.6417171597799,25.5374676170375,21.3513081226178,0,0.182975287204819,0,29.0350318961436,21.3849791812038,19.2525792198781,2.65165726926301,3.98640706237488,0.372798891650601,0.454357159999104,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,9.57735254481427,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.470354828542819,0.376999773989026,0,0,0,0.323533699894818,0,0,0,11.7112318804619,7.33063473847093,0,0,0,0,24.1162929441765,16.0125210986519,0.125654352112864,7.30062144807561,5.37002460393694,23.4800490352303,13.9527486238272,0.101839363850316,0,0,1.89397670297827,0,0.459804208866946,0,0.60281927134286,1.42876648217788,0.768682321709099,0.937017245597288,2.58703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,10.0939175310781,0.205809224758569,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0.551873492609465,46.0780193264963,32.1160021262637,0,0.504941854408746,5.36363973007636,4.68526493155966,10.1248996934415,9.79772071605463,11.1399337041197,9.90767857760913,4.85772842009873,4.67609372658099,6.32460444714438,8.03303291054518,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0.661585194164886,0.49465875882444,0,0.180938774784468,0.119372344003136,0,0,59.1506713413526,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0.259229946583586,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.906921534460845,0,0,0,0.19318959403219,0,0,0,0,4.51801474093653,4.60325236507177,6.30185064783336,1.71853182343688,6.85082519770642,5.2877572817279,4.05013500139084,6.30449684513909,6.34399372577886,3.62432218226274,0,0,0,0.486213434136588,0.209613162627982,0.551530525350042,0,0,0,0.252697211763798,0.25347929989024,0,0,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0.57386499620653,0.882365676478062,0.927471342481686|short_description=p6@Plekhb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27276 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QYE9 | |||
|association_with_transcript=84bp_to_ENSMUST00000107046_5end | |||
|cluster_id=chr7:107805371..107805382,- | |||
|description=CAGE_peak_6_at_Plekhb1_5end | |||
|id=chr7:107805371..107805382,- | |||
|ontology_enrichment_celltype=CL:0000221!1.46e-13!44;CL:0000133!1.46e-13!44;CL:0002319!7.48e-13!43;CL:0000055!2.02e-09!50;CL:0000540!3.13e-09!33;CL:0000047!3.13e-09!33;CL:0000031!3.13e-09!33;CL:0000404!3.13e-09!33;CL:0000107!4.00e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.00e-18,44;CL:0000133,4.00e-18,44;CL:0000540,8.81e-18,33;CL:0000047,8.81e-18,33;CL:0000031,8.81e-18,33;CL:0000404,8.81e-18,33;CL:0002319,7.23e-17,43;CL:0000107,7.31e-15,9;CL:0000393,3.25e-14,39;CL:0000211,3.25e-14,39;CL:0002321,4.50e-09,70;CL:0002610,4.14e-07,3;CL:0002614,5.41e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.79e-29!102;UBERON:0000924!1.79e-29!102;UBERON:0006601!1.79e-29!102;UBERON:0000073!1.15e-25!75;UBERON:0001016!1.15e-25!75;UBERON:0001017!8.95e-25!73;UBERON:0005743!8.95e-25!73;UBERON:0000033!6.70e-18!63;UBERON:0002346!1.58e-16!71;UBERON:0003075!1.58e-16!71;UBERON:0007284!1.58e-16!71;UBERON:0001049!1.32e-13!52;UBERON:0005068!1.32e-13!52;UBERON:0006241!1.32e-13!52;UBERON:0007135!1.32e-13!52;UBERON:0000955!7.14e-13!50;UBERON:0006238!7.14e-13!50;UBERON:0002616!3.24e-12!49;UBERON:0002020!1.55e-11!34;UBERON:0003056!7.35e-10!49;UBERON:0007811!1.40e-09!86;UBERON:0002791!1.12e-08!29;UBERON:0003528!1.12e-08!29;UBERON:0001893!1.12e-08!29;UBERON:0000010!1.16e-08!11;UBERON:0003076!3.72e-08!12;UBERON:0003057!3.72e-08!12;UBERON:0002410!4.00e-08!9;UBERON:0002021!4.73e-08!10;UBERON:0000411!4.73e-08!10;UBERON:0001950!4.73e-08!10;UBERON:0000153!6.45e-08!94;UBERON:0002619!6.48e-08!17;UBERON:0003080!1.46e-07!40;UBERON:0002298!5.17e-07!6;UBERON:0002780!6.08e-07!39;UBERON:0001890!6.08e-07!39;UBERON:0006240!6.08e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.01e-42,73;UBERON:0001016,5.23e-41,75;UBERON:0004121,1.73e-38,95;UBERON:0000924,1.73e-38,95;UBERON:0006601,1.73e-38,95;UBERON:0002346,7.78e-25,64;UBERON:0003075,7.78e-25,64;UBERON:0007284,7.78e-25,64;UBERON:0000073,4.41e-24,54;UBERON:0010371,7.56e-24,73;UBERON:0001049,3.25e-21,52;UBERON:0005068,3.25e-21,52;UBERON:0006241,3.25e-21,52;UBERON:0007135,3.25e-21,52;UBERON:0010314,5.09e-17,92;UBERON:0000955,5.81e-17,47;UBERON:0006238,5.81e-17,47;UBERON:0002020,6.50e-16,34;UBERON:0002616,8.57e-16,46;UBERON:0002410,7.31e-15,9;UBERON:0002021,1.02e-14,10;UBERON:0000411,1.02e-14,10;UBERON:0001950,1.02e-14,10;UBERON:0003056,4.24e-12,49;UBERON:0003528,5.58e-12,29;UBERON:0002791,5.58e-12,29;UBERON:0001893,5.58e-12,29;UBERON:0003080,7.47e-12,40;UBERON:0000010,8.15e-12,11;UBERON:0003076,1.95e-11,12;UBERON:0003057,1.95e-11,12;UBERON:0011216,8.47e-11,194;UBERON:0002780,1.09e-10,39;UBERON:0001890,1.09e-10,39;UBERON:0006240,1.09e-10,39;UBERON:0002619,9.71e-10,17;UBERON:0000956,4.82e-09,21;UBERON:0001869,4.82e-09,21;UBERON:0000203,4.82e-09,21;UBERON:0002950,8.06e-09,4;UBERON:0001891,8.06e-09,4;UBERON:0009616,8.06e-09,4;UBERON:0010286,8.06e-09,4;UBERON:0002240,2.26e-07,6;UBERON:0005174,2.26e-07,6;UBERON:0001137,2.26e-07,6;UBERON:0004684,4.14e-07,3;UBERON:0002275,4.14e-07,3;UBERON:0002038,5.41e-07,3;UBERON:0009663,5.41e-07,3;UBERON:0009661,5.41e-07,3;UBERON:0000125,5.41e-07,3;UBERON:0002308,5.41e-07,3;UBERON:0004111,7.97e-07,122 | |||
|phase1_expression=4.64431656603902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.388859798148567,0.699932108126813,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,3.29560121570245,9.22123932771731,0,0,0,8.85518051651791,8.83474163806454,0,0.0958454710182364,0,39.6417171597799,25.5374676170375,21.3513081226178,0,0.182975287204819,0,29.0350318961436,21.3849791812038,19.2525792198781,2.65165726926301,3.98640706237488,0.372798891650601,0.454357159999104,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,9.57735254481427,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.470354828542819,0.376999773989026,0,0,0,0.323533699894818,0,0,0,11.7112318804619,7.33063473847093,0,0,0,0,24.1162929441765,16.0125210986519,0.125654352112864,7.30062144807561,5.37002460393694,23.4800490352303,13.9527486238272,0.101839363850316,0,0,1.89397670297827,0,0.459804208866946,0,0.60281927134286,1.42876648217788,0.768682321709099,0.937017245597288,2.58703370739016,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,10.0939175310781,0.205809224758569,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0.551873492609465,46.0780193264963,32.1160021262637,0,0.504941854408746,5.36363973007636,4.68526493155966,10.1248996934415,9.79772071605463,11.1399337041197,9.90767857760913,4.85772842009873,4.67609372658099,6.32460444714438,8.03303291054518,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0.661585194164886,0.49465875882444,0,0.180938774784468,0.119372344003136,0,0,59.1506713413526,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0.216010681643603,0,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0.259229946583586,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0.906921534460845,0,0,0,0.19318959403219,0,0,0,0,4.51801474093653,4.60325236507177,6.30185064783336,1.71853182343688,6.85082519770642,5.2877572817279,4.05013500139084,6.30449684513909,6.34399372577886,3.62432218226274,0,0,0,0.486213434136588,0.209613162627982,0.551530525350042,0,0,0,0.252697211763798,0.25347929989024,0,0,0.192075457214608,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.214871054048298,0.57386499620653,0.882365676478062,0.927471342481686 | |||
|short_description=p6@Plekhb1 | |||
}} |
Latest revision as of 14:55, 25 September 2015
Short description: | p6@Plekhb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Plekhb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 84bp_to_ENSMUST00000107046_5end |
EntrezGene: | Plekhb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.00e-18 | 44 |
neurectodermal cell | 4.00e-18 | 44 |
neuron | 8.81e-18 | 33 |
neuronal stem cell | 8.81e-18 | 33 |
neuroblast | 8.81e-18 | 33 |
electrically signaling cell | 8.81e-18 | 33 |
neural cell | 7.23e-17 | 43 |
autonomic neuron | 7.31e-15 | 9 |
electrically responsive cell | 3.25e-14 | 39 |
electrically active cell | 3.25e-14 | 39 |
embryonic cell | 4.50e-09 | 70 |
raphe nuclei neuron | 4.14e-07 | 3 |
neuron of the substantia nigra | 5.41e-07 | 3 |