FFCP PHASE1:Mm9::chr3:68673259..68673321,+: Difference between revisions
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{{FFCP|EntrezGene=68725|HGNC=|MCL_coexpression_id=3414|UniProt=E9Q0B3|association_with_transcript=-186bp_to_ENSMUST00000054551,NM_001167996,uc012cqj.1_5end|description=CAGE_peak_1_at_1110032F04Rik_5end|id=chr3:68673259..68673321,+|ontology_enrichment_celltype=CL:0000117!4.63e-11!23;CL:0000337!4.63e-11!23;CL:0000540!1.05e-07!33;CL:0000047!1.05e-07!33;CL:0000031!1.05e-07!33;CL:0000404!1.05e-07!33;CL:0000624!5.38e-07!8;CL:0000791!6.86e-07!9;CL:0000789!6.86e-07!9;CL:0002420!6.86e-07!9;CL:0002419!6.86e-07!9;CL:0000790!6.86e-07!9|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-18,23;CL:0000337,1.09e-18,23;CL:0000624,2.95e-17,8;CL:0000791,3.61e-15,9;CL:0000789,3.61e-15,9;CL:0002420,3.61e-15,9;CL:0002419,3.61e-15,9;CL:0000790,3.61e-15,9;CL:0000540,7.29e-14,33;CL:0000047,7.29e-14,33;CL:0000031,7.29e-14,33;CL:0000404,7.29e-14,33;CL:0000893,2.30e-13,6;CL:0002489,2.30e-13,6;CL:0000898,2.30e-13,6;CL:0000809,2.30e-13,6;CL:0000810,2.30e-13,6;CL:0000895,2.30e-13,6;CL:0000808,2.30e-13,6;CL:0000894,2.30e-13,6;CL:0000806,2.30e-13,6;CL:0000807,2.30e-13,6;CL:0000805,2.30e-13,6;CL:0002425,2.30e-13,6;CL:0002436,2.30e-13,6;CL:0002427,2.30e-13,6;CL:0002428,2.30e-13,6;CL:0002429,2.30e-13,6;CL:0002433,2.30e-13,6;CL:0002431,2.30e-13,6;CL:0002432,2.30e-13,6;CL:0000084,3.92e-12,11;CL:0000827,3.92e-12,11;CL:0000393,3.99e-11,39;CL:0000211,3.99e-11,39;CL:0000838,5.38e-11,12;CL:0000221,6.77e-11,44;CL:0000133,6.77e-11,44;CL:0000542,4.93e-10,13;CL:0000051,4.93e-10,13;CL:0002319,9.89e-10,43;CL:0000723,1.29e-08,91;CL:0000048,1.29e-08,91;CL:0000034,9.94e-08,97;CL:0002612,1.20e-07,3;CL:0000738,2.52e-07,17;CL:0002087,2.52e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.14e-14!86;UBERON:0000153!3.61e-12!94;UBERON:0001049!1.29e-11!52;UBERON:0005068!1.29e-11!52;UBERON:0006241!1.29e-11!52;UBERON:0007135!1.29e-11!52;UBERON:0002020!1.73e-11!34;UBERON:0000033!4.28e-10!63;UBERON:0001017!6.76e-10!73;UBERON:0005743!6.76e-10!73;UBERON:0003056!9.52e-10!49;UBERON:0002346!1.69e-09!71;UBERON:0003075!1.69e-09!71;UBERON:0007284!1.69e-09!71;UBERON:0000073!4.14e-09!75;UBERON:0001016!4.14e-09!75;UBERON:0000955!4.88e-09!50;UBERON:0006238!4.88e-09!50;UBERON:0003080!5.13e-09!40;UBERON:0002616!1.30e-08!49;UBERON:0002780!1.33e-08!39;UBERON:0001890!1.33e-08!39;UBERON:0006240!1.33e-08!39;UBERON:0002791!2.61e-08!29;UBERON:0003528!2.61e-08!29;UBERON:0001893!2.61e-08!29|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.78e-16,34;UBERON:0001948,9.21e-12,5;UBERON:0002315,9.21e-12,5;UBERON:0000073,3.56e-11,54;UBERON:0001049,1.86e-10,52;UBERON:0005068,1.86e-10,52;UBERON:0006241,1.86e-10,52;UBERON:0007135,1.86e-10,52;UBERON:0001017,3.05e-10,73;UBERON:0001016,8.00e-10,75;UBERON:0002240,1.01e-09,6;UBERON:0005174,1.01e-09,6;UBERON:0001137,1.01e-09,6;UBERON:0003528,2.01e-09,29;UBERON:0002791,2.01e-09,29;UBERON:0001893,2.01e-09,29;UBERON:0010371,3.61e-08,73;UBERON:0010314,6.39e-08,92;UBERON:0002346,1.14e-07,64;UBERON:0003075,1.14e-07,64;UBERON:0007284,1.14e-07,64;UBERON:0002257,1.20e-07,3;UBERON:0004121,1.63e-07,95;UBERON:0000924,1.63e-07,95;UBERON:0006601,1.63e-07,95;UBERON:0002780,2.18e-07,39;UBERON:0001890,2.18e-07,39;UBERON:0006240,2.18e-07,39;UBERON:0003080,3.95e-07,40;UBERON:0000489,6.24e-07,21|phase1_expression=3.68342348341026,0,0,0,0,0.839396359559449,0.467225281191051,9.29687928779349,2.39340827657833,1.17032263160997,5.47897498321616,9.89174771542172,1.71200729931206,1.92324885321794,0,0.202475267389826,0.699561878128147,0.157731082679119,0.137114433605739,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0.167782606057736,1.45072428402269,0.336093799142464,0.257259436035947,0,0,1.82084814773638,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,3.83651565541367,2.70011876663381,2.94454945891935,2.85650984403804,2.20868540951614,0.61245399607477,0.862609239164127,0,0,0.383062014255563,1.53606533256243,1.45074916503213,1.00636407962651,1.56274011167028,0.837548997004143,0.56276261003168,2.13917546887534,2.06240009831567,2.42031857358475,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,2.39433813620357,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.898743836428936,0.915001205637253,1.50785222535437,1.04294592115366,1.02286182932132,1.24672826735736,0.324482526135515,0.407357455401265,0.248813941220186,0,0,0.390361328888111,0.689706313300419,0.540186389416048,0.30140963567143,0.748401490664606,0.384341160854549,0.749613796477831,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0.257347907114715,0,1.65700618028402,1.64168241986767,0.540186184383045,0.946978942340841,1.57411385397923,0.308534225774757,0.697601834251224,0.268273401399619,0.350296027101508,0.329119699826961,0,0.0810688095458557,0,0,0,0.420579897128254,0.411618449517138,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0.758671603812327,0.3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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68725 | |||
|HGNC= | |||
|MCL_coexpression_id=3414 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q0B3 | |||
|association_with_transcript=-186bp_to_ENSMUST00000054551,NM_001167996,uc012cqj.1_5end | |||
|cluster_id=chr3:68673259..68673321,+ | |||
|description=CAGE_peak_1_at_1110032F04Rik_5end | |||
|id=chr3:68673259..68673321,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.63e-11!23;CL:0000337!4.63e-11!23;CL:0000540!1.05e-07!33;CL:0000047!1.05e-07!33;CL:0000031!1.05e-07!33;CL:0000404!1.05e-07!33;CL:0000624!5.38e-07!8;CL:0000791!6.86e-07!9;CL:0000789!6.86e-07!9;CL:0002420!6.86e-07!9;CL:0002419!6.86e-07!9;CL:0000790!6.86e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-18,23;CL:0000337,1.09e-18,23;CL:0000624,2.95e-17,8;CL:0000791,3.61e-15,9;CL:0000789,3.61e-15,9;CL:0002420,3.61e-15,9;CL:0002419,3.61e-15,9;CL:0000790,3.61e-15,9;CL:0000540,7.29e-14,33;CL:0000047,7.29e-14,33;CL:0000031,7.29e-14,33;CL:0000404,7.29e-14,33;CL:0000893,2.30e-13,6;CL:0002489,2.30e-13,6;CL:0000898,2.30e-13,6;CL:0000809,2.30e-13,6;CL:0000810,2.30e-13,6;CL:0000895,2.30e-13,6;CL:0000808,2.30e-13,6;CL:0000894,2.30e-13,6;CL:0000806,2.30e-13,6;CL:0000807,2.30e-13,6;CL:0000805,2.30e-13,6;CL:0002425,2.30e-13,6;CL:0002436,2.30e-13,6;CL:0002427,2.30e-13,6;CL:0002428,2.30e-13,6;CL:0002429,2.30e-13,6;CL:0002433,2.30e-13,6;CL:0002431,2.30e-13,6;CL:0002432,2.30e-13,6;CL:0000084,3.92e-12,11;CL:0000827,3.92e-12,11;CL:0000393,3.99e-11,39;CL:0000211,3.99e-11,39;CL:0000838,5.38e-11,12;CL:0000221,6.77e-11,44;CL:0000133,6.77e-11,44;CL:0000542,4.93e-10,13;CL:0000051,4.93e-10,13;CL:0002319,9.89e-10,43;CL:0000723,1.29e-08,91;CL:0000048,1.29e-08,91;CL:0000034,9.94e-08,97;CL:0002612,1.20e-07,3;CL:0000738,2.52e-07,17;CL:0002087,2.52e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.14e-14!86;UBERON:0000153!3.61e-12!94;UBERON:0001049!1.29e-11!52;UBERON:0005068!1.29e-11!52;UBERON:0006241!1.29e-11!52;UBERON:0007135!1.29e-11!52;UBERON:0002020!1.73e-11!34;UBERON:0000033!4.28e-10!63;UBERON:0001017!6.76e-10!73;UBERON:0005743!6.76e-10!73;UBERON:0003056!9.52e-10!49;UBERON:0002346!1.69e-09!71;UBERON:0003075!1.69e-09!71;UBERON:0007284!1.69e-09!71;UBERON:0000073!4.14e-09!75;UBERON:0001016!4.14e-09!75;UBERON:0000955!4.88e-09!50;UBERON:0006238!4.88e-09!50;UBERON:0003080!5.13e-09!40;UBERON:0002616!1.30e-08!49;UBERON:0002780!1.33e-08!39;UBERON:0001890!1.33e-08!39;UBERON:0006240!1.33e-08!39;UBERON:0002791!2.61e-08!29;UBERON:0003528!2.61e-08!29;UBERON:0001893!2.61e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.78e-16,34;UBERON:0001948,9.21e-12,5;UBERON:0002315,9.21e-12,5;UBERON:0000073,3.56e-11,54;UBERON:0001049,1.86e-10,52;UBERON:0005068,1.86e-10,52;UBERON:0006241,1.86e-10,52;UBERON:0007135,1.86e-10,52;UBERON:0001017,3.05e-10,73;UBERON:0001016,8.00e-10,75;UBERON:0002240,1.01e-09,6;UBERON:0005174,1.01e-09,6;UBERON:0001137,1.01e-09,6;UBERON:0003528,2.01e-09,29;UBERON:0002791,2.01e-09,29;UBERON:0001893,2.01e-09,29;UBERON:0010371,3.61e-08,73;UBERON:0010314,6.39e-08,92;UBERON:0002346,1.14e-07,64;UBERON:0003075,1.14e-07,64;UBERON:0007284,1.14e-07,64;UBERON:0002257,1.20e-07,3;UBERON:0004121,1.63e-07,95;UBERON:0000924,1.63e-07,95;UBERON:0006601,1.63e-07,95;UBERON:0002780,2.18e-07,39;UBERON:0001890,2.18e-07,39;UBERON:0006240,2.18e-07,39;UBERON:0003080,3.95e-07,40;UBERON:0000489,6.24e-07,21 | |||
|phase1_expression=3.68342348341026,0,0,0,0,0.839396359559449,0.467225281191051,9.29687928779349,2.39340827657833,1.17032263160997,5.47897498321616,9.89174771542172,1.71200729931206,1.92324885321794,0,0.202475267389826,0.699561878128147,0.157731082679119,0.137114433605739,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0,0,0,0.167782606057736,1.45072428402269,0.336093799142464,0.257259436035947,0,0,1.82084814773638,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,3.83651565541367,2.70011876663381,2.94454945891935,2.85650984403804,2.20868540951614,0.61245399607477,0.862609239164127,0,0,0.383062014255563,1.53606533256243,1.45074916503213,1.00636407962651,1.56274011167028,0.837548997004143,0.56276261003168,2.13917546887534,2.06240009831567,2.42031857358475,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,2.39433813620357,0,0,0,0,0,0,0,0,0,0.173485326766136,0.608930956624282,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.898743836428936,0.915001205637253,1.50785222535437,1.04294592115366,1.02286182932132,1.24672826735736,0.324482526135515,0.407357455401265,0.248813941220186,0,0,0.390361328888111,0.689706313300419,0.540186389416048,0.30140963567143,0.748401490664606,0.384341160854549,0.749613796477831,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0.257347907114715,0,1.65700618028402,1.64168241986767,0.540186184383045,0.946978942340841,1.57411385397923,0.308534225774757,0.697601834251224,0.268273401399619,0.350296027101508,0.329119699826961,0,0.0810688095458557,0,0,0,0.420579897128254,0.411618449517138,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0.758671603812327,0.342745537829186,5.63538678365402,1.01825663922657,0.581857461502877,1.1221731182451,1.45444035385792,0.590440591918409,0.31399745568275,0,0,0.667380422864376,0.196558995113203,0.449724224769707,0,0.241177159752417,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0.757965647081939,0.162964976442026,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0,0.215423397732799,0.716906393857656,0,0.283076530788832,0,0,0,0.963963949265421,0.425820255624806,1.6025904330053,0.81443479676788,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.164549020602121,0.913394847343798,0.704015124191131,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.556275906031529,0,0.412773735926445,0,0,0.27338845544205,0,0,0,0,0,1.42351197111511,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.299033092087958,0.330916980914195,0.388902376688095,0.904118764344118,0.337912250981556,0.352071715937262,0.5208175393758,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0.308132871494482,0.649604114888975,0.179026695667481,0.39736270956253,0.841368146639782,0.295379054349154,0.201932899896295,0.381034033274999,0.604957110821043,0.292373642219257,0.384847366561318,0.818138315270983,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,1.3748254587495,2.05524755931193,0,0,0.900642406448441,1.35942722695261,0,0.103787347584177,0.399024873401031,0.512200817262403,0.972426868273176,0.209613162627982,0.551530525350042,0.222246727801615,0.824140228955577,0,0.758091635291392,0.25347929989024,0,0.187283014939765,0.128050304809739,0.34461281373368,0.476293691283074,0,0,1.23625770240992,0.735994600671987,0,0,0.476872379894642,0,0.564656282491984,0.0846146078916765,0.365855945745545,0,0.950628796921032,0,0.474540072496697,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.749431733813838,0,0,0.191288332068843,0,0 | |||
|short_description=p1@1110032F04Rik | |||
}} |
Latest revision as of 16:20, 25 September 2015
Short description: | p1@1110032F04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1110032F04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3414 |
Association with transcript: | -186bp_to_ENSMUST00000054551, NM_001167996, uc012cqj.1_5end |
EntrezGene: | 1110032F04Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gray matter | 1.78e-16 | 34 |
regional part of spinal cord | 9.21e-12 | 5 |
gray matter of spinal cord | 9.21e-12 | 5 |
regional part of nervous system | 3.56e-11 | 54 |
neural tube | 1.86e-10 | 52 |
neural rod | 1.86e-10 | 52 |
future spinal cord | 1.86e-10 | 52 |
neural keel | 1.86e-10 | 52 |
central nervous system | 3.05e-10 | 73 |
nervous system | 8.00e-10 | 75 |
spinal cord | 1.01e-09 | 6 |
dorsal region element | 1.01e-09 | 6 |
dorsum | 1.01e-09 | 6 |
brain grey matter | 2.01e-09 | 29 |
regional part of telencephalon | 2.01e-09 | 29 |
telencephalon | 2.01e-09 | 29 |
ecto-epithelium | 3.61e-08 | 73 |
structure with developmental contribution from neural crest | 6.39e-08 | 92 |
neurectoderm | 1.14e-07 | 64 |
neural plate | 1.14e-07 | 64 |
presumptive neural plate | 1.14e-07 | 64 |
ventral horn of spinal cord | 1.20e-07 | 3 |
ectoderm-derived structure | 1.63e-07 | 95 |
ectoderm | 1.63e-07 | 95 |
presumptive ectoderm | 1.63e-07 | 95 |
regional part of forebrain | 2.18e-07 | 39 |
forebrain | 2.18e-07 | 39 |
future forebrain | 2.18e-07 | 39 |
anterior neural tube | 3.95e-07 | 40 |
cavitated compound organ | 6.24e-07 | 21 |