FFCP PHASE1:Mm9::chr7:112729786..112729797,-: Difference between revisions
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{{FFCP|EntrezGene=11785|HGNC=|MCL_coexpression_id=1|UniProt=Q9QXJ1|association_with_transcript=-51bp_to_uc009iyi.1_5end|description=CAGE_peak_5_at_Apbb1_5end|id=chr7:112729786..112729797,-|ontology_enrichment_celltype=CL:0000117!2.94e-14!23;CL:0000337!2.94e-14!23;CL:0000540!1.37e-10!33;CL:0000047!1.37e-10!33;CL:0000031!1.37e-10!33;CL:0000404!1.37e-10!33;CL:0002319!1.41e-10!43;CL:0000221!1.47e-10!44;CL:0000133!1.47e-10!44;CL:0000393!5.48e-08!39;CL:0000211!5.48e-08!39;CL:0000055!6.12e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.47e-15,23;CL:0000337,2.47e-15,23;CL:0000540,7.37e-10,33;CL:0000047,7.37e-10,33;CL:0000031,7.37e-10,33;CL:0000404,7.37e-10,33;CL:0002610,6.14e-09,3;CL:0002319,3.74e-08,43;CL:0002614,4.47e-08,3;CL:0000393,6.20e-08,39;CL:0000211,6.20e-08,39;CL:0000221,6.65e-08,44;CL:0000133,6.65e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.42e-27!73;UBERON:0005743!2.42e-27!73;UBERON:0000073!1.96e-26!75;UBERON:0001016!1.96e-26!75;UBERON:0001049!2.69e-25!52;UBERON:0005068!2.69e-25!52;UBERON:0006241!2.69e-25!52;UBERON:0007135!2.69e-25!52;UBERON:0002346!4.71e-25!71;UBERON:0003075!4.71e-25!71;UBERON:0007284!4.71e-25!71;UBERON:0000033!1.26e-24!63;UBERON:0000955!3.21e-24!50;UBERON:0006238!3.21e-24!50;UBERON:0002616!1.53e-23!49;UBERON:0004121!7.00e-23!102;UBERON:0000924!7.00e-23!102;UBERON:0006601!7.00e-23!102;UBERON:0002020!6.92e-22!34;UBERON:0003056!6.09e-21!49;UBERON:0003080!7.53e-19!40;UBERON:0002791!1.16e-18!29;UBERON:0003528!1.16e-18!29;UBERON:0001893!1.16e-18!29;UBERON:0002780!3.95e-18!39;UBERON:0001890!3.95e-18!39;UBERON:0006240!3.95e-18!39;UBERON:0000956!1.96e-13!21;UBERON:0001869!1.96e-13!21;UBERON:0000203!1.96e-13!21;UBERON:0007811!1.69e-11!86;UBERON:0002619!2.23e-11!17;UBERON:0000025!8.03e-11!114;UBERON:0004111!1.05e-10!122;UBERON:0000153!8.32e-10!94;UBERON:0002021!8.84e-09!10;UBERON:0000411!8.84e-09!10;UBERON:0001950!8.84e-09!10;UBERON:0003076!5.25e-07!12;UBERON:0003057!5.25e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.92e-40,54;UBERON:0001017,1.26e-36,73;UBERON:0001049,1.59e-35,52;UBERON:0005068,1.59e-35,52;UBERON:0006241,1.59e-35,52;UBERON:0007135,1.59e-35,52;UBERON:0001016,1.79e-35,75;UBERON:0002020,3.78e-34,34;UBERON:0000955,2.46e-31,47;UBERON:0006238,2.46e-31,47;UBERON:0003528,1.02e-30,29;UBERON:0002791,1.02e-30,29;UBERON:0001893,1.02e-30,29;UBERON:0002616,1.29e-29,46;UBERON:0003080,1.18e-28,40;UBERON:0002346,1.06e-27,64;UBERON:0003075,1.06e-27,64;UBERON:0007284,1.06e-27,64;UBERON:0002780,9.17e-27,39;UBERON:0001890,9.17e-27,39;UBERON:0006240,9.17e-27,39;UBERON:0004121,1.32e-26,95;UBERON:0000924,1.32e-26,95;UBERON:0006601,1.32e-26,95;UBERON:0002021,6.27e-25,10;UBERON:0000411,6.27e-25,10;UBERON:0001950,6.27e-25,10;UBERON:0010371,1.61e-23,73;UBERON:0002619,3.81e-23,17;UBERON:0003056,2.00e-22,49;UBERON:0000956,2.00e-21,21;UBERON:0001869,2.00e-21,21;UBERON:0000203,2.00e-21,21;UBERON:0010314,2.27e-17,92;UBERON:0000025,8.34e-13,114;UBERON:0004111,1.49e-11,122;UBERON:0002950,2.96e-10,4;UBERON:0001891,2.96e-10,4;UBERON:0009616,2.96e-10,4;UBERON:0010286,2.96e-10,4;UBERON:0002420,3.00e-10,8;UBERON:0007245,3.00e-10,8;UBERON:0010009,3.00e-10,8;UBERON:0010011,3.00e-10,8;UBERON:0000454,3.00e-10,8;UBERON:0011216,1.60e-09,194;UBERON:0004684,6.14e-09,3;UBERON:0002275,6.14e-09,3;UBERON:0002038,4.47e-08,3;UBERON:0009663,4.47e-08,3;UBERON:0009661,4.47e-08,3;UBERON:0000125,4.47e-08,3;UBERON:0002308,4.47e-08,3;UBERON:0003076,3.31e-07,12;UBERON:0003057,3.31e-07,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.436050312760893,0.219686182734472,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.61853168687678,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.414758449233911,0.540023753326763,0.841299845405528,1.99955689082663,1.10434270475807,0.244981598429908,0.383381884072945,1.83843757322004,3.30347642998166,3.19218345212969,4.45458946443106,1.05509030184155,0.914876436024097,1.56274011167028,1.67509799400829,2.8138130501584,2.13917546887534,1.47314292736834,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,2.54644086988199,0.915001205637253,1.63350657746724,4.34560800480691,5.11430914660661,2.90903262383384,1.94689515681309,0.101839363850316,0.124406970610093,0,0.210441855886474,0.390361328888111,0.229902104433473,0.180062129805349,0.753524089178575,0.476255494059295,0.12811372028485,0.562210347358373,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0.617068451549513,0.232533944750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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11785 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QXJ1 | |||
|association_with_transcript=-51bp_to_uc009iyi.1_5end | |||
|cluster_id=chr7:112729786..112729797,- | |||
|description=CAGE_peak_5_at_Apbb1_5end | |||
|id=chr7:112729786..112729797,- | |||
|ontology_enrichment_celltype=CL:0000117!2.94e-14!23;CL:0000337!2.94e-14!23;CL:0000540!1.37e-10!33;CL:0000047!1.37e-10!33;CL:0000031!1.37e-10!33;CL:0000404!1.37e-10!33;CL:0002319!1.41e-10!43;CL:0000221!1.47e-10!44;CL:0000133!1.47e-10!44;CL:0000393!5.48e-08!39;CL:0000211!5.48e-08!39;CL:0000055!6.12e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.47e-15,23;CL:0000337,2.47e-15,23;CL:0000540,7.37e-10,33;CL:0000047,7.37e-10,33;CL:0000031,7.37e-10,33;CL:0000404,7.37e-10,33;CL:0002610,6.14e-09,3;CL:0002319,3.74e-08,43;CL:0002614,4.47e-08,3;CL:0000393,6.20e-08,39;CL:0000211,6.20e-08,39;CL:0000221,6.65e-08,44;CL:0000133,6.65e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.42e-27!73;UBERON:0005743!2.42e-27!73;UBERON:0000073!1.96e-26!75;UBERON:0001016!1.96e-26!75;UBERON:0001049!2.69e-25!52;UBERON:0005068!2.69e-25!52;UBERON:0006241!2.69e-25!52;UBERON:0007135!2.69e-25!52;UBERON:0002346!4.71e-25!71;UBERON:0003075!4.71e-25!71;UBERON:0007284!4.71e-25!71;UBERON:0000033!1.26e-24!63;UBERON:0000955!3.21e-24!50;UBERON:0006238!3.21e-24!50;UBERON:0002616!1.53e-23!49;UBERON:0004121!7.00e-23!102;UBERON:0000924!7.00e-23!102;UBERON:0006601!7.00e-23!102;UBERON:0002020!6.92e-22!34;UBERON:0003056!6.09e-21!49;UBERON:0003080!7.53e-19!40;UBERON:0002791!1.16e-18!29;UBERON:0003528!1.16e-18!29;UBERON:0001893!1.16e-18!29;UBERON:0002780!3.95e-18!39;UBERON:0001890!3.95e-18!39;UBERON:0006240!3.95e-18!39;UBERON:0000956!1.96e-13!21;UBERON:0001869!1.96e-13!21;UBERON:0000203!1.96e-13!21;UBERON:0007811!1.69e-11!86;UBERON:0002619!2.23e-11!17;UBERON:0000025!8.03e-11!114;UBERON:0004111!1.05e-10!122;UBERON:0000153!8.32e-10!94;UBERON:0002021!8.84e-09!10;UBERON:0000411!8.84e-09!10;UBERON:0001950!8.84e-09!10;UBERON:0003076!5.25e-07!12;UBERON:0003057!5.25e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.92e-40,54;UBERON:0001017,1.26e-36,73;UBERON:0001049,1.59e-35,52;UBERON:0005068,1.59e-35,52;UBERON:0006241,1.59e-35,52;UBERON:0007135,1.59e-35,52;UBERON:0001016,1.79e-35,75;UBERON:0002020,3.78e-34,34;UBERON:0000955,2.46e-31,47;UBERON:0006238,2.46e-31,47;UBERON:0003528,1.02e-30,29;UBERON:0002791,1.02e-30,29;UBERON:0001893,1.02e-30,29;UBERON:0002616,1.29e-29,46;UBERON:0003080,1.18e-28,40;UBERON:0002346,1.06e-27,64;UBERON:0003075,1.06e-27,64;UBERON:0007284,1.06e-27,64;UBERON:0002780,9.17e-27,39;UBERON:0001890,9.17e-27,39;UBERON:0006240,9.17e-27,39;UBERON:0004121,1.32e-26,95;UBERON:0000924,1.32e-26,95;UBERON:0006601,1.32e-26,95;UBERON:0002021,6.27e-25,10;UBERON:0000411,6.27e-25,10;UBERON:0001950,6.27e-25,10;UBERON:0010371,1.61e-23,73;UBERON:0002619,3.81e-23,17;UBERON:0003056,2.00e-22,49;UBERON:0000956,2.00e-21,21;UBERON:0001869,2.00e-21,21;UBERON:0000203,2.00e-21,21;UBERON:0010314,2.27e-17,92;UBERON:0000025,8.34e-13,114;UBERON:0004111,1.49e-11,122;UBERON:0002950,2.96e-10,4;UBERON:0001891,2.96e-10,4;UBERON:0009616,2.96e-10,4;UBERON:0010286,2.96e-10,4;UBERON:0002420,3.00e-10,8;UBERON:0007245,3.00e-10,8;UBERON:0010009,3.00e-10,8;UBERON:0010011,3.00e-10,8;UBERON:0000454,3.00e-10,8;UBERON:0011216,1.60e-09,194;UBERON:0004684,6.14e-09,3;UBERON:0002275,6.14e-09,3;UBERON:0002038,4.47e-08,3;UBERON:0009663,4.47e-08,3;UBERON:0009661,4.47e-08,3;UBERON:0000125,4.47e-08,3;UBERON:0002308,4.47e-08,3;UBERON:0003076,3.31e-07,12;UBERON:0003057,3.31e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.436050312760893,0.219686182734472,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.61853168687678,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.414758449233911,0.540023753326763,0.841299845405528,1.99955689082663,1.10434270475807,0.244981598429908,0.383381884072945,1.83843757322004,3.30347642998166,3.19218345212969,4.45458946443106,1.05509030184155,0.914876436024097,1.56274011167028,1.67509799400829,2.8138130501584,2.13917546887534,1.47314292736834,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,2.54644086988199,0.915001205637253,1.63350657746724,4.34560800480691,5.11430914660661,2.90903262383384,1.94689515681309,0.101839363850316,0.124406970610093,0,0.210441855886474,0.390361328888111,0.229902104433473,0.180062129805349,0.753524089178575,0.476255494059295,0.12811372028485,0.562210347358373,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0.617068451549513,0.232533944750408,0,0.233530684734339,0.16455984991348,0.492502392237286,0.243206428637567,0.146199987425332,0,0.134206418760372,2.73376933133365,1.02904612379284,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.569003702859245,0,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0.318909537314974,0.655453258862952,0,0.578596234326046,0,0,0,0,5.45872005958493,4.21962071731931,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,4.63563255026274,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.785267825952089,0.129614973291793,0,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,3.3885110557024,2.76195141904306,1.14579102687879,5.499301834998,6.16574267793578,3.0215755895588,2.70009000092722,4.05289082901798,2.26571204492102,2.5888015587591,0.31136204275253,0,0.170733605754134,0,0.838452650511929,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.38581844092741,0.412085900803307,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.376437521661322,0.169229215783353,0.182927972872773,0.526139422875686,0.543216455383447,0,0.355905054372522,0.591026894253381,0,0,0.385813221962283,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Apbb1 | |||
}} |
Latest revision as of 16:30, 25 September 2015
Short description: | p5@Apbb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Apbb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -51bp_to_uc009iyi.1_5end |
EntrezGene: | Apbb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.47e-15 | 23 |
neuroblast (sensu Vertebrata) | 2.47e-15 | 23 |
neuron | 7.37e-10 | 33 |
neuronal stem cell | 7.37e-10 | 33 |
neuroblast | 7.37e-10 | 33 |
electrically signaling cell | 7.37e-10 | 33 |
raphe nuclei neuron | 6.14e-09 | 3 |
neural cell | 3.74e-08 | 43 |
neuron of the substantia nigra | 4.47e-08 | 3 |
electrically responsive cell | 6.20e-08 | 39 |
electrically active cell | 6.20e-08 | 39 |
ectodermal cell | 6.65e-08 | 44 |
neurectodermal cell | 6.65e-08 | 44 |