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FFCP PHASE1:Mm9::chr7:112730112..112730128,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:112730112..112730128,-
|DHSsupport=NA
|short_description=p4@Apbb1
|DPIdataset=NA
|description=CAGE_peak_4_at_Apbb1_5end
|association_with_transcript=38bp_to_NM_009685_5end
|EntrezGene=11785
|EntrezGene=11785
|HGNC=
|HGNC=
|MCL_coexpression_id=311
|TSSclassifier=NA
|UniProt=Q9QXJ1
|UniProt=Q9QXJ1
|association_with_transcript=38bp_to_NM_009685_5end
|cluster_id=chr7:112730112..112730128,-
|description=CAGE_peak_4_at_Apbb1_5end
|id=chr7:112730112..112730128,-
|ontology_enrichment_celltype=CL:0000221!1.04e-09!44;CL:0000133!1.04e-09!44;CL:0002319!1.17e-09!43;CL:0000055!4.01e-08!50;CL:0000540!4.13e-08!33;CL:0000047!4.13e-08!33;CL:0000031!4.13e-08!33;CL:0000404!4.13e-08!33;CL:0000117!3.43e-07!23;CL:0000337!3.43e-07!23;CL:0000393!4.85e-07!39;CL:0000211!4.85e-07!39
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.34e-21!73;UBERON:0005743!8.34e-21!73;UBERON:0000073!2.06e-20!75;UBERON:0001016!2.06e-20!75;UBERON:0004121!4.66e-20!102;UBERON:0000924!4.66e-20!102;UBERON:0006601!4.66e-20!102;UBERON:0002346!5.43e-17!71;UBERON:0003075!5.43e-17!71;UBERON:0007284!5.43e-17!71;UBERON:0000033!1.35e-16!63;UBERON:0001049!1.30e-14!52;UBERON:0005068!1.30e-14!52;UBERON:0006241!1.30e-14!52;UBERON:0007135!1.30e-14!52;UBERON:0000955!5.83e-14!50;UBERON:0006238!5.83e-14!50;UBERON:0002616!1.96e-13!49;UBERON:0000025!1.27e-12!114;UBERON:0004111!2.55e-12!122;UBERON:0003056!5.13e-12!49;UBERON:0002020!2.04e-10!34;UBERON:0003080!1.81e-09!40;UBERON:0002780!4.97e-09!39;UBERON:0001890!4.97e-09!39;UBERON:0006240!4.97e-09!39;UBERON:0002791!2.46e-08!29;UBERON:0003528!2.46e-08!29;UBERON:0001893!2.46e-08!29;UBERON:0007811!1.50e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.04e-22,92;UBERON:0001017,1.39e-17,73;UBERON:0001016,1.04e-16,75;UBERON:0002346,5.59e-16,64;UBERON:0003075,5.59e-16,64;UBERON:0007284,5.59e-16,64;UBERON:0004121,3.64e-15,95;UBERON:0000924,3.64e-15,95;UBERON:0006601,3.64e-15,95;UBERON:0000073,2.01e-14,54;UBERON:0000025,2.09e-14,114;UBERON:0004111,4.08e-13,122;UBERON:0001049,4.83e-13,52;UBERON:0005068,4.83e-13,52;UBERON:0006241,4.83e-13,52;UBERON:0007135,4.83e-13,52;UBERON:0010371,2.20e-12,73;UBERON:0002020,6.45e-11,34;UBERON:0000955,1.04e-10,47;UBERON:0006238,1.04e-10,47;UBERON:0002616,4.55e-10,46;UBERON:0007100,1.36e-09,18;UBERON:0000948,1.36e-09,18;UBERON:0005498,1.36e-09,18;UBERON:0004140,1.36e-09,18;UBERON:0009881,1.36e-09,18;UBERON:0004141,1.36e-09,18;UBERON:0003084,1.36e-09,18;UBERON:0007005,1.36e-09,18;UBERON:0004139,1.36e-09,18;UBERON:0004291,1.36e-09,18;UBERON:0003528,9.53e-09,29;UBERON:0002791,9.53e-09,29;UBERON:0001893,9.53e-09,29;UBERON:0003056,1.33e-08,49;UBERON:0000483,4.72e-08,174;UBERON:0000119,9.33e-08,176;UBERON:0002021,1.17e-07,10;UBERON:0000411,1.17e-07,10;UBERON:0001950,1.17e-07,10;UBERON:0003076,1.35e-07,12;UBERON:0003057,1.35e-07,12;UBERON:0003080,2.03e-07,40;UBERON:0004535,2.51e-07,23;UBERON:0001009,2.51e-07,23;UBERON:0002619,5.22e-07,17;UBERON:0002780,6.83e-07,39;UBERON:0001890,6.83e-07,39;UBERON:0006240,6.83e-07,39
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.405507724878058,0.183546752161682,1.56478268869608,0.218025156380447,1.09843091367236,1.36100929351998,0.279972843250725,1.43752564364972,0.167782606057736,0,0,0,0.573066879877513,0,1.21389876515759,1.5869729378161,1.90149421051854,0.338844532069132,0,0,0,0,1.49800055259202,2.30530983192933,0.414758449233911,0.405017814995072,0.420649922702764,4.85606673486466,7.73039893330647,0.367472397644862,0.383381884072945,0,2.20231761998777,3.57524546638526,3.84016333140609,1.31886287730194,1.37231465403614,0.52091337055676,5.862842979029,1.68828783009504,3.81995619442025,1.47314292736834,0.854230084794618,1.3047961207771,0.075726193333184,0.377857800533928,0,0,0,0,0,0,1.12355536105401,0.170430322578058,0,0,0.563373679106722,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0,0.867426633830679,0.608930956624282,0.691846491768175,0,0.470354828542819,0,0.247194967734374,0.144599356919912,0.884610551949874,1.13236794963186,0,0,0,1.46390398505774,2.09446706813455,0,0,0,0,1.9472783122627,2.28750301409313,0.628271760564322,2.08589184230732,4.09144731728529,3.94797284663164,5.19172041816825,0.611036183101898,0.248813941220186,0,0.420883711772948,0.780722657776222,0.919608417733892,1.26043490863744,0.60281927134286,1.2246569847239,2.8185018462667,2.81105173679186,2.84573707812917,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0,0,0,0,0,1.44988040774851,1.17263029990548,2.16074473753218,1.65721314909647,1.57411385397923,1.07986979021165,1.16266972375204,1.60964040839772,2.56883753207773,3.45575684818309,3.2833492815819,4.62092214411378,6.28659945928929,4.17145219052996,7.38135303182045,1.47202963994889,1.13195073617213,0,0,1.06644125267617,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0.350679099451593,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0.179397413521912,0,2.03228509183265,0,0.488894929326078,0.339490171550376,0.704070744865506,1.00503754465089,1.42826184531608,2.92700471786698,0.788175720530955,1.32878813789265,1.11618338060241,1.96635977658886,1.55416483679306,2.89298117163023,0,0,0,0,4.33486592967038,6.79827782234778,0,1.26235463602186,1.26203287766503,1.56175497718655,1.93881057959519,0.955875191810208,0.668396022247182,0,0.404810701674894,0.876767573733936,0.790575555893047,2.24924921495265,0,0.712262414669021,0.488660878060728,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.905510786479282,0.214337035031592,0.886701168211368,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.32977250588296,0.322928853391811,0.422190474497091,0.596861720015682,0,0,6.48988557036784,0,0.206386867963223,0.370389054739423,0,0,0,0,0.139951452323658,0,0,0.316335993581135,0,0.108005340821801,0,0.87345025498471,0.269728692769641,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0,0,2.0405734525369,0,0,0,0.772758376128762,0,0.183151624267265,0,0,5.64751842617067,4.14292712856459,4.01026859407578,4.1244763762485,4.11049511862385,1.5107877947794,2.02506750069542,0,2.26571204492102,1.03552062350364,0.207574695168353,0,0.341467211508268,0.729320151204882,0.628839487883947,1.10306105070008,1.55572709461131,0.618105171716683,0.320919209591815,0.758091635291392,1.2673964994512,1.13175804831646,0.936415074698824,0.704276676453562,0.804096565378586,0.952587382566147,0.579421629724277,0.578727661391115,0.412085900803307,0.883193520806384,2.40008476669791,1.06485483695602,0.953744759789284,0.436039249896986,1.69396884747595,1.18460451048347,1.28049581010941,0,1.49384525230448,1.12228454331548,1.42362021749009,1.37906275325789,1.63692417267876,0.464810523557898,0.964533054905707,1.74867404556562,1.16965804222704,1.07435527024149,2.10417165275728,1.32354851471709,0.231867835620421
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.405507724878058,0.183546752161682,1.56478268869608,0.218025156380447,1.09843091367236,1.36100929351998,0.279972843250725,1.43752564364972,0.167782606057736,0,0,0,0.573066879877513,0,1.21389876515759,1.5869729378161,1.90149421051854,0.338844532069132,0,0,0,0,1.49800055259202,2.30530983192933,0.414758449233911,0.405017814995072,0.420649922702764,4.85606673486466,7.73039893330647,0.367472397644862,0.383381884072945,0,2.20231761998777,3.57524546638526,3.84016333140609,1.31886287730194,1.37231465403614,0.52091337055676,5.862842979029,1.68828783009504,3.81995619442025,1.47314292736834,0.854230084794618,1.3047961207771,0.075726193333184,0.377857800533928,0,0,0,0,0,0,1.12355536105401,0.170430322578058,0,0,0.563373679106722,1.28326477414318,0,0,0,0,0,0.34255163915718,0,0,0.867426633830679,0.608930956624282,0.691846491768175,0,0.470354828542819,0,0.247194967734374,0.144599356919912,0.884610551949874,1.13236794963186,0,0,0,1.46390398505774,2.09446706813455,0,0,0,0,1.9472783122627,2.28750301409313,0.628271760564322,2.08589184230732,4.09144731728529,3.94797284663164,5.19172041816825,0.611036183101898,0.248813941220186,0,0.420883711772948,0.780722657776222,0.919608417733892,1.26043490863744,0.60281927134286,1.2246569847239,2.8185018462667,2.81105173679186,2.84573707812917,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.696504333044333,0,0,0,0,0,1.44988040774851,1.17263029990548,2.16074473753218,1.65721314909647,1.57411385397923,1.07986979021165,1.16266972375204,1.60964040839772,2.56883753207773,3.45575684818309,3.2833492815819,4.62092214411378,6.28659945928929,4.17145219052996,7.38135303182045,1.47202963994889,1.13195073617213,0,0,1.06644125267617,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0.397912944082302,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.387904974335251,0.350679099451593,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0.179397413521912,0,2.03228509183265,0,0.488894929326078,0.339490171550376,0.704070744865506,1.00503754465089,1.42826184531608,2.92700471786698,0.788175720530955,1.32878813789265,1.11618338060241,1.96635977658886,1.55416483679306,2.89298117163023,0,0,0,0,4.33486592967038,6.79827782234778,0,1.26235463602186,1.26203287766503,1.56175497718655,1.93881057959519,0.955875191810208,0.668396022247182,0,0.404810701674894,0.876767573733936,0.790575555893047,2.24924921495265,0,0.712262414669021,0.488660878060728,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.905510786479282,0.214337035031592,0.886701168211368,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.32977250588296,0.322928853391811,0.422190474497091,0.596861720015682,0,0,6.48988557036784,0,0.206386867963223,0.370389054739423,0,0,0,0,0.139951452323658,0,0,0.316335993581135,0,0.108005340821801,0,0.87345025498471,0.269728692769641,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.15241361331,0,0,0,0,2.0405734525369,0,0,0,0.772758376128762,0,0.183151624267265,0,0,5.64751842617067,4.14292712856459,4.01026859407578,4.1244763762485,4.11049511862385,1.5107877947794,2.02506750069542,0,2.26571204492102,1.03552062350364,0.207574695168353,0,0.341467211508268,0.729320151204882,0.628839487883947,1.10306105070008,1.55572709461131,0.618105171716683,0.320919209591815,0.758091635291392,1.2673964994512,1.13175804831646,0.936415074698824,0.704276676453562,0.804096565378586,0.952587382566147,0.579421629724277,0.578727661391115,0.412085900803307,0.883193520806384,2.40008476669791,1.06485483695602,0.953744759789284,0.436039249896986,1.69396884747595,1.18460451048347,1.28049581010941,0,1.49384525230448,1.12228454331548,1.42362021749009,1.37906275325789,1.63692417267876,0.464810523557898,0.964533054905707,1.74867404556562,1.16965804222704,1.07435527024149,2.10417165275728,1.32354851471709,0.231867835620421
|short_description=p4@Apbb1
}}
}}

Latest revision as of 16:31, 25 September 2015

Short description:p4@Apbb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Apbb1_5end
Coexpression cluster:MCL_coexpression_mm9:311
Association with transcript: 38bp_to_NM_009685_5end
EntrezGene:Apbb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Apbb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G82.81
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E32.57
heart, neonate N03.CNhs11221.1349-25I23.46
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G14.62
heart, neonate N20.CNhs11127.821-26I66.29
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D27.38
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A36.80
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest9.04e-2292
central nervous system1.39e-1773
nervous system1.04e-1675
neurectoderm5.59e-1664
neural plate5.59e-1664
presumptive neural plate5.59e-1664
ectoderm-derived structure3.64e-1595
ectoderm3.64e-1595
presumptive ectoderm3.64e-1595
regional part of nervous system2.01e-1454
tube2.09e-14114
anatomical conduit4.08e-13122
neural tube4.83e-1352
neural rod4.83e-1352
future spinal cord4.83e-1352
neural keel4.83e-1352
ecto-epithelium2.20e-1273
gray matter6.45e-1134
brain1.04e-1047
future brain1.04e-1047
regional part of brain4.55e-1046
primary circulatory organ1.36e-0918
heart1.36e-0918
primitive heart tube1.36e-0918
primary heart field1.36e-0918
anterior lateral plate mesoderm1.36e-0918
heart tube1.36e-0918
heart primordium1.36e-0918
cardiac mesoderm1.36e-0918
cardiogenic plate1.36e-0918
heart rudiment1.36e-0918
brain grey matter9.53e-0929
regional part of telencephalon9.53e-0929
telencephalon9.53e-0929
pre-chordal neural plate1.33e-0849
epithelium4.72e-08174
cell layer9.33e-08176
occipital lobe1.17e-0710
visual cortex1.17e-0710
neocortex1.17e-0710
posterior neural tube1.35e-0712
chordal neural plate1.35e-0712
anterior neural tube2.03e-0740
cardiovascular system2.51e-0723
circulatory system2.51e-0723
regional part of cerebral cortex5.22e-0717
regional part of forebrain6.83e-0739
forebrain6.83e-0739
future forebrain6.83e-0739
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