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FFCP PHASE1:Mm9::chr19:38339077..38339112,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56839
|EntrezGene=56839
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9JIA1
|UniProt=Q9JIA1
|association_with_transcript=-159bp_to_ENSMUST00000087252,ENSMUST00000134832,NM_020278,uc008hji.1_5end
|association_with_transcript=-159bp_to_ENSMUST00000087252,ENSMUST00000134832,NM_020278,uc008hji.1_5end
|cluster_id=chr19:38339077..38339112,+
|description=CAGE_peak_3_at_Lgi1_5end
|description=CAGE_peak_3_at_Lgi1_5end
|id=chr19:38339077..38339112,+
|id=chr19:38339077..38339112,+
|ontology_enrichment_celltype=CL:0000540!4.06e-09!33;CL:0000047!4.06e-09!33;CL:0000031!4.06e-09!33;CL:0000404!4.06e-09!33;CL:0000117!4.64e-09!23;CL:0000337!4.64e-09!23
|ontology_enrichment_celltype=CL:0000540!4.06e-09!33;CL:0000047!4.06e-09!33;CL:0000031!4.06e-09!33;CL:0000404!4.06e-09!33;CL:0000117!4.64e-09!23;CL:0000337!4.64e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.66e-11,23;CL:0000337,1.66e-11,23;CL:0000540,3.56e-07,33;CL:0000047,3.56e-07,33;CL:0000031,3.56e-07,33;CL:0000404,3.56e-07,33;CL:0002610,4.45e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.80e-20!102;UBERON:0000924!1.80e-20!102;UBERON:0006601!1.80e-20!102;UBERON:0002346!1.79e-18!71;UBERON:0003075!1.79e-18!71;UBERON:0007284!1.79e-18!71;UBERON:0000073!4.03e-17!75;UBERON:0001016!4.03e-17!75;UBERON:0001017!4.81e-17!73;UBERON:0005743!4.81e-17!73;UBERON:0000033!7.63e-16!63;UBERON:0001049!1.05e-14!52;UBERON:0005068!1.05e-14!52;UBERON:0006241!1.05e-14!52;UBERON:0007135!1.05e-14!52;UBERON:0002020!1.12e-14!34;UBERON:0000955!8.59e-14!50;UBERON:0006238!8.59e-14!50;UBERON:0002616!4.39e-13!49;UBERON:0003056!5.22e-13!49;UBERON:0002791!1.01e-11!29;UBERON:0003528!1.01e-11!29;UBERON:0001893!1.01e-11!29;UBERON:0003080!3.80e-10!40;UBERON:0002780!1.65e-09!39;UBERON:0001890!1.65e-09!39;UBERON:0006240!1.65e-09!39;UBERON:0000956!7.92e-09!21;UBERON:0001869!7.92e-09!21;UBERON:0000203!7.92e-09!21;UBERON:0002021!1.32e-08!10;UBERON:0000411!1.32e-08!10;UBERON:0001950!1.32e-08!10;UBERON:0002619!1.83e-08!17;UBERON:0000153!5.99e-07!94
|ontology_enrichment_uberon=UBERON:0004121!1.80e-20!102;UBERON:0000924!1.80e-20!102;UBERON:0006601!1.80e-20!102;UBERON:0002346!1.79e-18!71;UBERON:0003075!1.79e-18!71;UBERON:0007284!1.79e-18!71;UBERON:0000073!4.03e-17!75;UBERON:0001016!4.03e-17!75;UBERON:0001017!4.81e-17!73;UBERON:0005743!4.81e-17!73;UBERON:0000033!7.63e-16!63;UBERON:0001049!1.05e-14!52;UBERON:0005068!1.05e-14!52;UBERON:0006241!1.05e-14!52;UBERON:0007135!1.05e-14!52;UBERON:0002020!1.12e-14!34;UBERON:0000955!8.59e-14!50;UBERON:0006238!8.59e-14!50;UBERON:0002616!4.39e-13!49;UBERON:0003056!5.22e-13!49;UBERON:0002791!1.01e-11!29;UBERON:0003528!1.01e-11!29;UBERON:0001893!1.01e-11!29;UBERON:0003080!3.80e-10!40;UBERON:0002780!1.65e-09!39;UBERON:0001890!1.65e-09!39;UBERON:0006240!1.65e-09!39;UBERON:0000956!7.92e-09!21;UBERON:0001869!7.92e-09!21;UBERON:0000203!7.92e-09!21;UBERON:0002021!1.32e-08!10;UBERON:0000411!1.32e-08!10;UBERON:0001950!1.32e-08!10;UBERON:0002619!1.83e-08!17;UBERON:0000153!5.99e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.94e-36,54;UBERON:0001049,1.19e-32,52;UBERON:0005068,1.19e-32,52;UBERON:0006241,1.19e-32,52;UBERON:0007135,1.19e-32,52;UBERON:0001017,2.30e-30,73;UBERON:0001016,2.50e-29,75;UBERON:0002020,1.60e-27,34;UBERON:0000955,1.97e-25,47;UBERON:0006238,1.97e-25,47;UBERON:0002346,4.45e-25,64;UBERON:0003075,4.45e-25,64;UBERON:0007284,4.45e-25,64;UBERON:0002616,1.06e-23,46;UBERON:0004121,2.32e-21,95;UBERON:0000924,2.32e-21,95;UBERON:0006601,2.32e-21,95;UBERON:0010371,4.90e-21,73;UBERON:0002021,1.33e-20,10;UBERON:0000411,1.33e-20,10;UBERON:0001950,1.33e-20,10;UBERON:0003528,3.69e-20,29;UBERON:0002791,3.69e-20,29;UBERON:0001893,3.69e-20,29;UBERON:0003080,2.82e-19,40;UBERON:0002780,1.02e-17,39;UBERON:0001890,1.02e-17,39;UBERON:0006240,1.02e-17,39;UBERON:0002619,2.22e-16,17;UBERON:0010314,2.57e-16,92;UBERON:0000956,3.14e-15,21;UBERON:0001869,3.14e-15,21;UBERON:0000203,3.14e-15,21;UBERON:0003076,8.56e-15,12;UBERON:0003057,8.56e-15,12;UBERON:0003056,1.00e-14,49;UBERON:0002240,2.37e-11,6;UBERON:0005174,2.37e-11,6;UBERON:0001137,2.37e-11,6;UBERON:0000025,9.79e-11,114;UBERON:0004111,1.52e-09,122;UBERON:0001948,2.93e-09,5;UBERON:0002315,2.93e-09,5;UBERON:0002950,1.25e-08,4;UBERON:0001891,1.25e-08,4;UBERON:0009616,1.25e-08,4;UBERON:0010286,1.25e-08,4;UBERON:0004684,4.45e-07,3;UBERON:0002275,4.45e-07,3;UBERON:0011216,9.47e-07,194
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,1.14260393761521,2.20868540951614,0.489963196859816,0.287536413054709,0.919218786610021,8.8092704799511,7.2781782708557,5.68344173048101,0.395658863190582,1.18933936683133,0,1.95428099300967,3.37657566019008,7.94550888439413,4.41942878210502,5.12538050876771,1.1183966749518,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.461230994512117,1.20578112442098,0.352766121407114,0.125666591329675,0,0,0.884610551949874,0.323533699894818,0.220841518460394,0,0,5.27005434620785,4.1889341362691,0,0,0,0,11.5338792341713,10.5225138648284,0.879580464790051,16.1656617778817,8.18289463457058,12.8828587626927,8.11206315338788,0.305518091550949,0.124406970610093,0,0.420883711772948,0.520481771850815,0.459804208866946,0.900310649026746,0.60281927134286,0.612328492361951,0.2562274405697,0.562210347358373,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,23.9730541363105,4.01327988279209,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0.38992817423824,0.898819408654221,0,0,0.379335801906163,0.456994050438915,0,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,7.70642831941401,5.04010252346474,0,0.252470927204373,0,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,18.9579576688866,0,0.534196811001766,0.81443479676788,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0.238744688006273,0,0,15.5757253688828,0.341741761595705,0.82554747185289,0.555583582109135,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0.627264888043406,0.436725127492355,0.134864346384821,1.1571483801547,0,0.129614973291793,0,0,0.299033092087958,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0.214368379079066,0.501572104035363,11.2950368523413,9.20650473014354,12.6037012956667,7.90524638780963,8.22099023724771,6.7985450765073,8.77529250301348,7.20513925158753,7.25027854374727,7.7664046762773,0.207574695168353,0,0.341467211508268,0.972426868273176,0.209613162627982,0,0.222246727801615,1.03017528619447,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.936415074698824,0.576226371643824,0.631790158511746,0.952587382566147,0.579421629724277,0.77163688185482,1.23625770240992,0.588795680537589,0.685738504770831,1.06485483695602,0.715308569841963,0.726732083161643,0.376437521661322,0.423073039458382,0.365855945745545,0.263069711437843,0.950628796921032,0,0.237270036248348,0.394017929502254,0,0.619747364743864,0.578719832943424,0,0.701794825336225,0.429742108096597,1.53030665655075,0.441182838239031,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,1.14260393761521,2.20868540951614,0.489963196859816,0.287536413054709,0.919218786610021,8.8092704799511,7.2781782708557,5.68344173048101,0.395658863190582,1.18933936683133,0,1.95428099300967,3.37657566019008,7.94550888439413,4.41942878210502,5.12538050876771,1.1183966749518,0.227178579999552,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.461230994512117,1.20578112442098,0.352766121407114,0.125666591329675,0,0,0.884610551949874,0.323533699894818,0.220841518460394,0,0,5.27005434620785,4.1889341362691,0,0,0,0,11.5338792341713,10.5225138648284,0.879580464790051,16.1656617778817,8.18289463457058,12.8828587626927,8.11206315338788,0.305518091550949,0.124406970610093,0,0.420883711772948,0.520481771850815,0.459804208866946,0.900310649026746,0.60281927134286,0.612328492361951,0.2562274405697,0.562210347358373,0.517406741478031,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0,23.9730541363105,4.01327988279209,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0.38992817423824,0.898819408654221,0,0,0.379335801906163,0.456994050438915,0,0.203651327845314,0.387904974335251,0.350679099451593,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,7.70642831941401,5.04010252346474,0,0.252470927204373,0,0.390438744296638,0.430846795465598,0.477937595905104,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,18.9579576688866,0,0.534196811001766,0.81443479676788,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0.238744688006273,0,0,15.5757253688828,0.341741761595705,0.82554747185289,0.555583582109135,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.108005340821801,0.627264888043406,0.436725127492355,0.134864346384821,1.1571483801547,0,0.129614973291793,0,0,0.299033092087958,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0.19318959403219,0,0,0.214368379079066,0.501572104035363,11.2950368523413,9.20650473014354,12.6037012956667,7.90524638780963,8.22099023724771,6.7985450765073,8.77529250301348,7.20513925158753,7.25027854374727,7.7664046762773,0.207574695168353,0,0.341467211508268,0.972426868273176,0.209613162627982,0,0.222246727801615,1.03017528619447,0.320919209591815,0.505394423527595,1.01391719956096,0.943131706930381,0.936415074698824,0.576226371643824,0.631790158511746,0.952587382566147,0.579421629724277,0.77163688185482,1.23625770240992,0.588795680537589,0.685738504770831,1.06485483695602,0.715308569841963,0.726732083161643,0.376437521661322,0.423073039458382,0.365855945745545,0.263069711437843,0.950628796921032,0,0.237270036248348,0.394017929502254,0,0.619747364743864,0.578719832943424,0,0.701794825336225,0.429742108096597,1.53030665655075,0.441182838239031,0.463735671240843
|short_description=p3@Lgi1
|short_description=p3@Lgi1
}}
}}

Latest revision as of 16:56, 25 September 2015

Short description:p3@Lgi1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lgi1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -159bp_to_ENSMUST00000087252, ENSMUST00000134832, NM_020278, uc008hji.1_5end
EntrezGene:Lgi1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lgi1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D516.17
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F212.88
diencephalon, neonate N30.CNhs11201.1388-42B28.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E823.97
hippocampus, neonate N00.CNhs11228.627-43G14.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I918.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.58
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.66e-1123
neuroblast (sensu Vertebrata)1.66e-1123
neuron3.56e-0733
neuronal stem cell3.56e-0733
neuroblast3.56e-0733
electrically signaling cell3.56e-0733
raphe nuclei neuron4.45e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.94e-3654
neural tube1.19e-3252
neural rod1.19e-3252
future spinal cord1.19e-3252
neural keel1.19e-3252
central nervous system2.30e-3073
nervous system2.50e-2975
gray matter1.60e-2734
brain1.97e-2547
future brain1.97e-2547
neurectoderm4.45e-2564
neural plate4.45e-2564
presumptive neural plate4.45e-2564
regional part of brain1.06e-2346
ectoderm-derived structure2.32e-2195
ectoderm2.32e-2195
presumptive ectoderm2.32e-2195
ecto-epithelium4.90e-2173
occipital lobe1.33e-2010
visual cortex1.33e-2010
neocortex1.33e-2010
brain grey matter3.69e-2029
regional part of telencephalon3.69e-2029
telencephalon3.69e-2029
anterior neural tube2.82e-1940
regional part of forebrain1.02e-1739
forebrain1.02e-1739
future forebrain1.02e-1739
regional part of cerebral cortex2.22e-1617
structure with developmental contribution from neural crest2.57e-1692
cerebral cortex3.14e-1521
cerebral hemisphere3.14e-1521
pallium3.14e-1521
posterior neural tube8.56e-1512
chordal neural plate8.56e-1512
pre-chordal neural plate1.00e-1449
spinal cord2.37e-116
dorsal region element2.37e-116
dorsum2.37e-116
tube9.79e-11114
anatomical conduit1.52e-09122
regional part of spinal cord2.93e-095
gray matter of spinal cord2.93e-095
regional part of midbrain1.25e-084
midbrain1.25e-084
presumptive midbrain1.25e-084
midbrain neural tube1.25e-084
raphe nuclei4.45e-073
reticular formation4.45e-073
organ system subdivision9.47e-07194
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