FFCP PHASE1:Mm9::chr14:122850378..122850408,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=328479 | |EntrezGene=328479 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2887 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_NR_033326,uc007vba.2,uc011zqj.1_5end | |association_with_transcript=-10bp_to_NR_033326,uc007vba.2,uc011zqj.1_5end | ||
|cluster_id=chr14:122850378..122850408,- | |||
|description=CAGE_peak_1_at_Gm5089_5end | |description=CAGE_peak_1_at_Gm5089_5end | ||
|id=chr14:122850378..122850408,- | |id=chr14:122850378..122850408,- | ||
|ontology_enrichment_celltype=CL:0000221!4.22e-14!44;CL:0000133!4.22e-14!44;CL:0002319!7.18e-14!43;CL:0000117!2.78e-12!23;CL:0000337!2.78e-12!23;CL:0000055!9.10e-11!50;CL:0002453!1.87e-08!8;CL:0000333!3.96e-08!10;CL:0000095!3.96e-08!10;CL:0000243!3.96e-08!10;CL:0000123!3.96e-08!10;CL:0000125!3.96e-08!10;CL:0000030!3.96e-08!10;CL:0000339!3.96e-08!10;CL:0000540!6.85e-08!33;CL:0000047!6.85e-08!33;CL:0000031!6.85e-08!33;CL:0000404!6.85e-08!33;CL:0000128!7.16e-07!6;CL:0000126!7.16e-07!6;CL:0000127!7.16e-07!6 | |ontology_enrichment_celltype=CL:0000221!4.22e-14!44;CL:0000133!4.22e-14!44;CL:0002319!7.18e-14!43;CL:0000117!2.78e-12!23;CL:0000337!2.78e-12!23;CL:0000055!9.10e-11!50;CL:0002453!1.87e-08!8;CL:0000333!3.96e-08!10;CL:0000095!3.96e-08!10;CL:0000243!3.96e-08!10;CL:0000123!3.96e-08!10;CL:0000125!3.96e-08!10;CL:0000030!3.96e-08!10;CL:0000339!3.96e-08!10;CL:0000540!6.85e-08!33;CL:0000047!6.85e-08!33;CL:0000031!6.85e-08!33;CL:0000404!6.85e-08!33;CL:0000128!7.16e-07!6;CL:0000126!7.16e-07!6;CL:0000127!7.16e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.12e-16,43;CL:0000221,1.08e-15,44;CL:0000133,1.08e-15,44;CL:0002453,3.39e-13,8;CL:0000117,1.85e-12,23;CL:0000337,1.85e-12,23;CL:0000128,1.55e-10,6;CL:0000126,1.55e-10,6;CL:0000127,1.55e-10,6;CL:0000333,3.82e-10,10;CL:0000095,3.82e-10,10;CL:0000243,3.82e-10,10;CL:0000123,3.82e-10,10;CL:0000125,3.82e-10,10;CL:0000030,3.82e-10,10;CL:0000339,3.82e-10,10;CL:0000540,1.06e-08,33;CL:0000047,1.06e-08,33;CL:0000031,1.06e-08,33;CL:0000404,1.06e-08,33;CL:0002321,3.09e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.49e-31!75;UBERON:0001016!6.49e-31!75;UBERON:0001017!1.25e-30!73;UBERON:0005743!1.25e-30!73;UBERON:0001049!1.45e-29!52;UBERON:0005068!1.45e-29!52;UBERON:0006241!1.45e-29!52;UBERON:0007135!1.45e-29!52;UBERON:0000033!2.73e-28!63;UBERON:0004121!9.23e-26!102;UBERON:0000924!9.23e-26!102;UBERON:0006601!9.23e-26!102;UBERON:0000955!1.47e-25!50;UBERON:0006238!1.47e-25!50;UBERON:0002616!4.60e-25!49;UBERON:0002346!7.84e-25!71;UBERON:0003075!7.84e-25!71;UBERON:0007284!7.84e-25!71;UBERON:0003056!3.45e-24!49;UBERON:0003080!3.26e-21!40;UBERON:0002780!7.12e-21!39;UBERON:0001890!7.12e-21!39;UBERON:0006240!7.12e-21!39;UBERON:0002020!8.05e-20!34;UBERON:0002791!2.49e-16!29;UBERON:0003528!2.49e-16!29;UBERON:0001893!2.49e-16!29;UBERON:0000153!4.11e-16!94;UBERON:0007811!6.79e-15!86;UBERON:0000956!4.23e-11!21;UBERON:0001869!4.23e-11!21;UBERON:0000203!4.23e-11!21;UBERON:0002619!1.65e-09!17;UBERON:0003076!9.45e-09!12;UBERON:0003057!9.45e-09!12 | |ontology_enrichment_uberon=UBERON:0000073!6.49e-31!75;UBERON:0001016!6.49e-31!75;UBERON:0001017!1.25e-30!73;UBERON:0005743!1.25e-30!73;UBERON:0001049!1.45e-29!52;UBERON:0005068!1.45e-29!52;UBERON:0006241!1.45e-29!52;UBERON:0007135!1.45e-29!52;UBERON:0000033!2.73e-28!63;UBERON:0004121!9.23e-26!102;UBERON:0000924!9.23e-26!102;UBERON:0006601!9.23e-26!102;UBERON:0000955!1.47e-25!50;UBERON:0006238!1.47e-25!50;UBERON:0002616!4.60e-25!49;UBERON:0002346!7.84e-25!71;UBERON:0003075!7.84e-25!71;UBERON:0007284!7.84e-25!71;UBERON:0003056!3.45e-24!49;UBERON:0003080!3.26e-21!40;UBERON:0002780!7.12e-21!39;UBERON:0001890!7.12e-21!39;UBERON:0006240!7.12e-21!39;UBERON:0002020!8.05e-20!34;UBERON:0002791!2.49e-16!29;UBERON:0003528!2.49e-16!29;UBERON:0001893!2.49e-16!29;UBERON:0000153!4.11e-16!94;UBERON:0007811!6.79e-15!86;UBERON:0000956!4.23e-11!21;UBERON:0001869!4.23e-11!21;UBERON:0000203!4.23e-11!21;UBERON:0002619!1.65e-09!17;UBERON:0003076!9.45e-09!12;UBERON:0003057!9.45e-09!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.10e-34,73;UBERON:0001016,7.55e-33,75;UBERON:0001049,1.09e-32,52;UBERON:0005068,1.09e-32,52;UBERON:0006241,1.09e-32,52;UBERON:0007135,1.09e-32,52;UBERON:0000073,4.69e-31,54;UBERON:0002346,1.04e-28,64;UBERON:0003075,1.04e-28,64;UBERON:0007284,1.04e-28,64;UBERON:0002616,9.53e-28,46;UBERON:0000955,6.10e-27,47;UBERON:0006238,6.10e-27,47;UBERON:0004121,1.03e-26,95;UBERON:0000924,1.03e-26,95;UBERON:0006601,1.03e-26,95;UBERON:0010371,1.96e-25,73;UBERON:0002780,4.84e-25,39;UBERON:0001890,4.84e-25,39;UBERON:0006240,4.84e-25,39;UBERON:0003080,3.41e-24,40;UBERON:0002020,3.69e-24,34;UBERON:0003056,2.89e-22,49;UBERON:0003528,1.23e-18,29;UBERON:0002791,1.23e-18,29;UBERON:0001893,1.23e-18,29;UBERON:0010314,1.04e-17,92;UBERON:0000956,7.24e-12,21;UBERON:0001869,7.24e-12,21;UBERON:0000203,7.24e-12,21;UBERON:0002619,9.92e-12,17;UBERON:0000025,4.98e-09,114;UBERON:0003076,9.94e-09,12;UBERON:0003057,9.94e-09,12;UBERON:0004111,1.40e-08,122;UBERON:0002420,3.17e-08,8;UBERON:0007245,3.17e-08,8;UBERON:0010009,3.17e-08,8;UBERON:0010011,3.17e-08,8;UBERON:0000454,3.17e-08,8;UBERON:0000007,2.49e-07,8;UBERON:0003296,2.49e-07,8;UBERON:0010133,2.49e-07,8;UBERON:0002021,2.50e-07,10;UBERON:0000411,2.50e-07,10;UBERON:0001950,2.50e-07,10;UBERON:0001894,3.00e-07,10;UBERON:0006222,3.00e-07,10;UBERON:0001948,5.22e-07,5;UBERON:0002315,5.22e-07,5;UBERON:0002037,6.24e-07,4;UBERON:0002680,6.24e-07,4;UBERON:0001895,6.24e-07,4;UBERON:0010092,6.24e-07,4;UBERON:0006215,6.24e-07,4 | |||
|phase1_expression=8.96833543786846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,21.9069576417451,3.05235218932625,19.3323840806335,19.0541301092798,11.3389001516544,20.125359011096,0,0,0,0,0,0,5.26022798234954,7.40587370980846,1.90149421051854,2.37191172448392,7.11435836888911,0,0,0,2.99600110518405,6.91592949578798,0.829516898467821,1.21505344498522,0.420649922702764,1.14260393761521,2.20868540951614,0.244981598429908,0.0958454710182364,2.75765635983006,0,0.893811366596314,0.46081959976873,4.74790635828698,10.9785172322892,5.2091337055676,1.11673199600552,1.12552522006336,2.90316670775939,2.65165726926301,2.27794689278565,4.10078780815661,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,1.86391761218122,4.9772735491963,2.72280718857492,0,0,0,0,0.748953197024114,2.74500361691176,0.753926112677186,1.73824320192276,1.02286182932132,1.45451631191692,0.811206315338788,0,0,0,0.420883711772948,0.650602214813519,0.229902104433473,1.0803727788321,0.30140963567143,0.95251098811859,1.15302348256365,1.12442069471675,0.258703370739016,1.5089759505299,0.945530400839096,0.351902248327898,0.219195732427575,0.834141747676794,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0,0,0,0,0,0,0,4.41608891984667,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,1.16422815404479,1.50035924522115,2.12808280370728,3.92411398724555,3.1264313914403,1.2178597964584,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.503653849092235,0,0,0,0,0,0,1.84130094602871,1.14579102687879,1.71853182343688,1.37016503954128,1.5107877947794,0.675022500231806,1.80128481289688,3.17199686288943,2.07104124700728,2.49089634202024,5.1873233542134,3.41467211508268,0.729320151204882,1.67690530102386,0.919217542250071,0.666740183404846,1.23621034343337,0.962757628775446,0.252697211763798,1.01391719956096,1.50901073108861,0.936415074698824,0.832326981263301,0.516919220600519,0.476293691283074,0.695305955669133,0.964546102318525,0.412085900803307,0.883193520806384,1.37147700954166,1.4198064492747,0.715308569841963,0.581385666529314,0.752875043322645,0.592302255241736,1.64635175585495,1.57841826862706,0.407412341537585,0.561142271657738,0.949080144993393,0.492522411877817,0.818462086339379,0.464810523557898,0.578719832943424,1.49886346762768,0.701794825336225,0,0,0.220591419119515,0 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|phase1_expression=8.96833543786846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,21.9069576417451,3.05235218932625,19.3323840806335,19.0541301092798,11.3389001516544,20.125359011096,0,0,0,0,0,0,5.26022798234954,7.40587370980846,1.90149421051854,2.37191172448392,7.11435836888911,0,0,0,2.99600110518405,6.91592949578798,0.829516898467821,1.21505344498522,0.420649922702764,1.14260393761521,2.20868540951614,0.244981598429908,0.0958454710182364,2.75765635983006,0,0.893811366596314,0.46081959976873,4.74790635828698,10.9785172322892,5.2091337055676,1.11673199600552,1.12552522006336,2.90316670775939,2.65165726926301,2.27794689278565,4.10078780815661,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,1.86391761218122,4.9772735491963,2.72280718857492,0,0,0,0,0.748953197024114,2.74500361691176,0.753926112677186,1.73824320192276,1.02286182932132,1.45451631191692,0.811206315338788,0,0,0,0.420883711772948,0.650602214813519,0.229902104433473,1.0803727788321,0.30140963567143,0.95251098811859,1.15302348256365,1.12442069471675,0.258703370739016,1.5089759505299,0.945530400839096,0.351902248327898,0.219195732427575,0.834141747676794,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0,0,0,0,0,0,0,0,0,4.41608891984667,3.60166143327496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,1.16422815404479,1.50035924522115,2.12808280370728,3.92411398724555,3.1264313914403,1.2178597964584,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.503653849092235,0,0,0,0,0,0,1.84130094602871,1.14579102687879,1.71853182343688,1.37016503954128,1.5107877947794,0.675022500231806,1.80128481289688,3.17199686288943,2.07104124700728,2.49089634202024,5.1873233542134,3.41467211508268,0.729320151204882,1.67690530102386,0.919217542250071,0.666740183404846,1.23621034343337,0.962757628775446,0.252697211763798,1.01391719956096,1.50901073108861,0.936415074698824,0.832326981263301,0.516919220600519,0.476293691283074,0.695305955669133,0.964546102318525,0.412085900803307,0.883193520806384,1.37147700954166,1.4198064492747,0.715308569841963,0.581385666529314,0.752875043322645,0.592302255241736,1.64635175585495,1.57841826862706,0.407412341537585,0.561142271657738,0.949080144993393,0.492522411877817,0.818462086339379,0.464810523557898,0.578719832943424,1.49886346762768,0.701794825336225,0,0,0.220591419119515,0 | ||
|short_description=p1@Gm5089 | |short_description=p1@Gm5089 | ||
}} | }} |
Latest revision as of 17:12, 25 September 2015
Short description: | p1@Gm5089 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm5089_5end |
Coexpression cluster: | MCL_coexpression_mm9:2887 |
Association with transcript: | -10bp_to_NR_033326, uc007vba.2, uc011zqj.1_5end |
EntrezGene: | Gm5089 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.12e-16 | 43 |
ectodermal cell | 1.08e-15 | 44 |
neurectodermal cell | 1.08e-15 | 44 |
oligodendrocyte precursor cell | 3.39e-13 | 8 |
CNS neuron (sensu Vertebrata) | 1.85e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.85e-12 | 23 |
oligodendrocyte | 1.55e-10 | 6 |
macroglial cell | 1.55e-10 | 6 |
astrocyte | 1.55e-10 | 6 |
migratory neural crest cell | 3.82e-10 | 10 |
neuron associated cell | 3.82e-10 | 10 |
glial cell (sensu Vertebrata) | 3.82e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 3.82e-10 | 10 |
glial cell | 3.82e-10 | 10 |
glioblast | 3.82e-10 | 10 |
glioblast (sensu Vertebrata) | 3.82e-10 | 10 |
neuron | 1.06e-08 | 33 |
neuronal stem cell | 1.06e-08 | 33 |
neuroblast | 1.06e-08 | 33 |
electrically signaling cell | 1.06e-08 | 33 |
embryonic cell | 3.09e-07 | 70 |