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FFCP PHASE1:Mm9::chr10:4795942..4795975,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=64009
|EntrezGene=64009
|HGNC=
|HGNC=
|MCL_coexpression_id=30
|TSSclassifier=NA
|UniProt=Q6ZWR6,Q6ZWR1,Q6ZWR5,Q80T95
|UniProt=Q6ZWR6,Q6ZWR1,Q6ZWR5,Q80T95
|association_with_transcript=93bp_to_ENSMUST00000041639,NM_153399,uc007egn.1_5end
|association_with_transcript=93bp_to_ENSMUST00000041639,NM_153399,uc007egn.1_5end
|cluster_id=chr10:4795942..4795975,+
|description=CAGE_peak_9_at_Syne1_5end
|description=CAGE_peak_9_at_Syne1_5end
|id=chr10:4795942..4795975,+
|id=chr10:4795942..4795975,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,9.92e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.86e-09!75;UBERON:0001016!1.86e-09!75;UBERON:0001017!4.61e-09!73;UBERON:0005743!4.61e-09!73;UBERON:0001049!5.14e-09!52;UBERON:0005068!5.14e-09!52;UBERON:0006241!5.14e-09!52;UBERON:0007135!5.14e-09!52;UBERON:0000955!7.35e-09!50;UBERON:0006238!7.35e-09!50;UBERON:0000025!8.41e-09!114;UBERON:0002616!2.65e-08!49;UBERON:0004111!2.89e-08!122;UBERON:0002346!4.70e-08!71;UBERON:0003075!4.70e-08!71;UBERON:0007284!4.70e-08!71;UBERON:0000033!6.81e-08!63;UBERON:0004121!7.04e-08!102;UBERON:0000924!7.04e-08!102;UBERON:0006601!7.04e-08!102;UBERON:0002021!1.66e-07!10;UBERON:0000411!1.66e-07!10;UBERON:0001950!1.66e-07!10;UBERON:0002020!3.08e-07!34
|ontology_enrichment_uberon=UBERON:0000073!1.86e-09!75;UBERON:0001016!1.86e-09!75;UBERON:0001017!4.61e-09!73;UBERON:0005743!4.61e-09!73;UBERON:0001049!5.14e-09!52;UBERON:0005068!5.14e-09!52;UBERON:0006241!5.14e-09!52;UBERON:0007135!5.14e-09!52;UBERON:0000955!7.35e-09!50;UBERON:0006238!7.35e-09!50;UBERON:0000025!8.41e-09!114;UBERON:0002616!2.65e-08!49;UBERON:0004111!2.89e-08!122;UBERON:0002346!4.70e-08!71;UBERON:0003075!4.70e-08!71;UBERON:0007284!4.70e-08!71;UBERON:0000033!6.81e-08!63;UBERON:0004121!7.04e-08!102;UBERON:0000924!7.04e-08!102;UBERON:0006601!7.04e-08!102;UBERON:0002021!1.66e-07!10;UBERON:0000411!1.66e-07!10;UBERON:0001950!1.66e-07!10;UBERON:0002020!3.08e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.28e-23,54;UBERON:0001049,4.39e-20,52;UBERON:0005068,4.39e-20,52;UBERON:0006241,4.39e-20,52;UBERON:0007135,4.39e-20,52;UBERON:0001017,6.24e-19,73;UBERON:0001016,3.43e-18,75;UBERON:0000955,6.17e-18,47;UBERON:0006238,6.17e-18,47;UBERON:0002616,1.11e-16,46;UBERON:0002346,4.21e-16,64;UBERON:0003075,4.21e-16,64;UBERON:0007284,4.21e-16,64;UBERON:0002021,1.10e-14,10;UBERON:0000411,1.10e-14,10;UBERON:0001950,1.10e-14,10;UBERON:0000025,4.00e-14,114;UBERON:0004121,1.80e-13,95;UBERON:0000924,1.80e-13,95;UBERON:0006601,1.80e-13,95;UBERON:0002020,2.53e-13,34;UBERON:0010371,3.61e-13,73;UBERON:0004111,1.48e-12,122;UBERON:0003080,1.69e-12,40;UBERON:0003528,1.92e-11,29;UBERON:0002791,1.92e-11,29;UBERON:0001893,1.92e-11,29;UBERON:0002780,2.51e-11,39;UBERON:0001890,2.51e-11,39;UBERON:0006240,2.51e-11,39;UBERON:0003056,2.62e-10,49;UBERON:0002619,1.07e-09,17;UBERON:0000956,6.18e-09,21;UBERON:0001869,6.18e-09,21;UBERON:0000203,6.18e-09,21;UBERON:0010314,6.46e-09,92;UBERON:0003076,6.51e-09,12;UBERON:0003057,6.51e-09,12;UBERON:0002950,5.17e-08,4;UBERON:0001891,5.17e-08,4;UBERON:0009616,5.17e-08,4;UBERON:0010286,5.17e-08,4;UBERON:0000483,5.22e-07,174;UBERON:0000119,8.07e-07,176;UBERON:0011216,9.06e-07,194;UBERON:0004684,9.92e-07,3;UBERON:0002275,9.92e-07,3
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,1.57057123192139,2.35292595212406,3.41522742479223,1.94204141212461,0.377690453926732,0.405507724878058,0.550640256485045,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0,0,0,1.53687322128622,0,0,0,0.856952953211411,1.10434270475807,0,0,0,6.60695285996332,6.63974158042976,5.9906547969935,0.131886287730194,0.182975287204819,0,5.30447698102624,2.8138130501584,4.43114918552749,1.47314292736834,2.70506193518296,0.186399445825301,0.227178579999552,0.377857800533928,3.47837386442013,0.860423876981386,0,0,0,0.896053774194671,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.29688427812965,0.173485326766136,0,0,0.452167921657868,0.352766121407114,0.125666591329675,0,0.433798070759735,0,0,0.662524555381181,0.484875253135222,0,37.1831612204665,35.6059401582874,0,0,0,0,7.48953197024113,4.57500602818627,0.125654352112864,2.60736480288415,2.55715457330331,8.3115217823824,3.56930778749067,0,0.746441823660558,0,0.420883711772948,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0,1.29351685369508,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0.729619285912702,0.438599962275997,0.439100230582101,0.402619256281115,4.83666881697493,0.411618449517138,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0.442830443938806,0,0.370191491765402,0,0,0,0,0,0.241177159752417,0.25462585178142,1.43848068725405,0,0,1.43768206527355,0,0,0,0,0,4.43407656399851,0,0,0,0,0.335012514883631,0.238043640886014,1.17080188714679,0.630540576424764,1.32878813789265,1.2756381492599,2.29408640602033,3.10832967358612,3.61622646453779,0,0,0,0,9.63303539926752,8.90808818100744,0,0.252470927204373,0,0,0.430846795465598,0,0,0.283076530788832,0,0,0.395287777946524,4.81981974632711,3.12268187458191,0,0,7.09371528781903,1.32745138339963,0,0,0,0,0,0,0,0,0.632073515871632,0,0,1.02131881726136,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,9.08583979851498,0,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0.524296722128554,0.724752362478018,0.864090018773596,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0,0,1.6942555278512,2.76195141904306,2.29158205375759,2.40594455281163,2.05524755931193,3.0215755895588,2.02506750069542,1.80128481289688,1.35942722695261,4.65984280576638,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0,0,0.280924522409647,0.320125762024346,0.34461281373368,0.952587382566147,0.231768651889711,0,0,0.441596760403192,0.685738504770831,0,0,0.436039249896986,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0.474540072496697,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.661774257358546,0
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,1.57057123192139,2.35292595212406,3.41522742479223,1.94204141212461,0.377690453926732,0.405507724878058,0.550640256485045,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0.338844532069132,0,0,0,0,0,1.53687322128622,0,0,0,0.856952953211411,1.10434270475807,0,0,0,6.60695285996332,6.63974158042976,5.9906547969935,0.131886287730194,0.182975287204819,0,5.30447698102624,2.8138130501584,4.43114918552749,1.47314292736834,2.70506193518296,0.186399445825301,0.227178579999552,0.377857800533928,3.47837386442013,0.860423876981386,0,0,0,0.896053774194671,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.29688427812965,0.173485326766136,0,0,0.452167921657868,0.352766121407114,0.125666591329675,0,0.433798070759735,0,0,0.662524555381181,0.484875253135222,0,37.1831612204665,35.6059401582874,0,0,0,0,7.48953197024113,4.57500602818627,0.125654352112864,2.60736480288415,2.55715457330331,8.3115217823824,3.56930778749067,0,0.746441823660558,0,0.420883711772948,0,0,0,0.150704817835715,0.204109497453984,0.12811372028485,0,1.29351685369508,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0.729619285912702,0.438599962275997,0.439100230582101,0.402619256281115,4.83666881697493,0.411618449517138,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0.442830443938806,0,0.370191491765402,0,0,0,0,0,0.241177159752417,0.25462585178142,1.43848068725405,0,0,1.43768206527355,0,0,0,0,0,4.43407656399851,0,0,0,0,0.335012514883631,0.238043640886014,1.17080188714679,0.630540576424764,1.32878813789265,1.2756381492599,2.29408640602033,3.10832967358612,3.61622646453779,0,0,0,0,9.63303539926752,8.90808818100744,0,0.252470927204373,0,0,0.430846795465598,0,0,0.283076530788832,0,0,0.395287777946524,4.81981974632711,3.12268187458191,0,0,7.09371528781903,1.32745138339963,0,0,0,0,0,0,0,0,0.632073515871632,0,0,1.02131881726136,0,0,0,0,0,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,9.08583979851498,0,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0.524296722128554,0.724752362478018,0.864090018773596,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.375364950902364,0.36630324853453,0,0,1.6942555278512,2.76195141904306,2.29158205375759,2.40594455281163,2.05524755931193,3.0215755895588,2.02506750069542,1.80128481289688,1.35942722695261,4.65984280576638,0,0,0,0,0,0.183843508450014,0,0.206035057238894,0.64183841918363,0,0,0,0.280924522409647,0.320125762024346,0.34461281373368,0.952587382566147,0.231768651889711,0,0,0.441596760403192,0.685738504770831,0,0,0.436039249896986,0.282328141245992,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0.474540072496697,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.382576664137687,0.661774257358546,0
|short_description=p9@Syne1
|short_description=p9@Syne1
}}
}}

Latest revision as of 01:23, 26 September 2015

Short description:p9@Syne1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Syne1_5end
Coexpression cluster:MCL_coexpression_mm9:30
Association with transcript: 93bp_to_ENSMUST00000041639, NM_153399, uc007egn.1_5end
EntrezGene:Syne1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Syne1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.43
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B237.18
cerebellum, neonate N30.CNhs11135.1395-42I235.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.63
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G67.09
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.09
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron9.92e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.28e-2354
neural tube4.39e-2052
neural rod4.39e-2052
future spinal cord4.39e-2052
neural keel4.39e-2052
central nervous system6.24e-1973
nervous system3.43e-1875
brain6.17e-1847
future brain6.17e-1847
regional part of brain1.11e-1646
neurectoderm4.21e-1664
neural plate4.21e-1664
presumptive neural plate4.21e-1664
occipital lobe1.10e-1410
visual cortex1.10e-1410
neocortex1.10e-1410
tube4.00e-14114
ectoderm-derived structure1.80e-1395
ectoderm1.80e-1395
presumptive ectoderm1.80e-1395
gray matter2.53e-1334
ecto-epithelium3.61e-1373
anatomical conduit1.48e-12122
anterior neural tube1.69e-1240
brain grey matter1.92e-1129
regional part of telencephalon1.92e-1129
telencephalon1.92e-1129
regional part of forebrain2.51e-1139
forebrain2.51e-1139
future forebrain2.51e-1139
pre-chordal neural plate2.62e-1049
regional part of cerebral cortex1.07e-0917
cerebral cortex6.18e-0921
cerebral hemisphere6.18e-0921
pallium6.18e-0921
structure with developmental contribution from neural crest6.46e-0992
posterior neural tube6.51e-0912
chordal neural plate6.51e-0912
regional part of midbrain5.17e-084
midbrain5.17e-084
presumptive midbrain5.17e-084
midbrain neural tube5.17e-084
epithelium5.22e-07174
cell layer8.07e-07176
organ system subdivision9.06e-07194
raphe nuclei9.92e-073
reticular formation9.92e-073
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