Personal tools

FFCP PHASE1:Mm9::chr14:60997079..60997129,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr14:60997079..60997129,+
|DHSsupport=NA
|short_description=p2@Fam123a
|DPIdataset=NA
|description=CAGE_peak_2_at_Fam123a_5end
|association_with_transcript=0bp_to_ENSMUST00000022561,ENSMUST00000089421,NM_001164705,NM_028113,uc007ufb.2,uc011zmz.1_5end
|EntrezGene=72125
|EntrezGene=72125
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=Q8CCJ4
|UniProt=Q8CCJ4
|association_with_transcript=0bp_to_ENSMUST00000022561,ENSMUST00000089421,NM_001164705,NM_028113,uc007ufb.2,uc011zmz.1_5end
|cluster_id=chr14:60997079..60997129,+
|description=CAGE_peak_2_at_Fam123a_5end
|id=chr14:60997079..60997129,+
|ontology_enrichment_celltype=CL:0000117!4.98e-14!23;CL:0000337!4.98e-14!23;CL:0000540!1.20e-11!33;CL:0000047!1.20e-11!33;CL:0000031!1.20e-11!33;CL:0000404!1.20e-11!33;CL:0000221!3.72e-10!44;CL:0000133!3.72e-10!44;CL:0002319!3.77e-10!43;CL:0000393!7.92e-08!39;CL:0000211!7.92e-08!39;CL:0000055!9.32e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-24,23;CL:0000337,1.51e-24,23;CL:0000540,2.75e-16,33;CL:0000047,2.75e-16,33;CL:0000031,2.75e-16,33;CL:0000404,2.75e-16,33;CL:0002319,4.99e-13,43;CL:0000393,1.08e-12,39;CL:0000211,1.08e-12,39;CL:0000221,1.46e-12,44;CL:0000133,1.46e-12,44;CL:0002609,5.42e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.46e-30!71;UBERON:0003075!2.46e-30!71;UBERON:0007284!2.46e-30!71;UBERON:0000033!2.95e-28!63;UBERON:0004121!5.08e-27!102;UBERON:0000924!5.08e-27!102;UBERON:0006601!5.08e-27!102;UBERON:0001017!5.71e-27!73;UBERON:0005743!5.71e-27!73;UBERON:0000073!1.15e-26!75;UBERON:0001016!1.15e-26!75;UBERON:0001049!7.62e-26!52;UBERON:0005068!7.62e-26!52;UBERON:0006241!7.62e-26!52;UBERON:0007135!7.62e-26!52;UBERON:0000955!2.04e-25!50;UBERON:0006238!2.04e-25!50;UBERON:0002616!1.02e-24!49;UBERON:0003056!1.91e-24!49;UBERON:0003080!4.13e-20!40;UBERON:0002780!1.98e-19!39;UBERON:0001890!1.98e-19!39;UBERON:0006240!1.98e-19!39;UBERON:0002020!3.15e-19!34;UBERON:0002791!1.02e-16!29;UBERON:0003528!1.02e-16!29;UBERON:0001893!1.02e-16!29;UBERON:0007811!1.31e-13!86;UBERON:0000956!5.77e-12!21;UBERON:0001869!5.77e-12!21;UBERON:0000203!5.77e-12!21;UBERON:0000153!2.73e-11!94;UBERON:0002619!1.34e-09!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.38e-40,64;UBERON:0003075,4.38e-40,64;UBERON:0007284,4.38e-40,64;UBERON:0000073,1.02e-39,54;UBERON:0001049,7.50e-37,52;UBERON:0005068,7.50e-37,52;UBERON:0006241,7.50e-37,52;UBERON:0007135,7.50e-37,52;UBERON:0001017,1.38e-36,73;UBERON:0001016,3.32e-35,75;UBERON:0004121,1.74e-33,95;UBERON:0000924,1.74e-33,95;UBERON:0006601,1.74e-33,95;UBERON:0010371,2.60e-33,73;UBERON:0000955,7.08e-32,47;UBERON:0006238,7.08e-32,47;UBERON:0002020,1.13e-31,34;UBERON:0002616,1.08e-30,46;UBERON:0003056,7.67e-30,49;UBERON:0003528,4.80e-27,29;UBERON:0002791,4.80e-27,29;UBERON:0001893,4.80e-27,29;UBERON:0003080,5.82e-26,40;UBERON:0002780,8.49e-25,39;UBERON:0001890,8.49e-25,39;UBERON:0006240,8.49e-25,39;UBERON:0010314,2.11e-23,92;UBERON:0000956,2.28e-18,21;UBERON:0001869,2.28e-18,21;UBERON:0000203,2.28e-18,21;UBERON:0002619,4.33e-14,17;UBERON:0000025,2.47e-11,114;UBERON:0003076,5.43e-11,12;UBERON:0003057,5.43e-11,12;UBERON:0002021,6.43e-11,10;UBERON:0000411,6.43e-11,10;UBERON:0001950,6.43e-11,10;UBERON:0004111,8.47e-10,122;UBERON:0002420,8.99e-10,8;UBERON:0007245,8.99e-10,8;UBERON:0010009,8.99e-10,8;UBERON:0010011,8.99e-10,8;UBERON:0000454,8.99e-10,8;UBERON:0000483,5.39e-08,174;UBERON:0000119,9.51e-08,176;UBERON:0002240,6.36e-07,6;UBERON:0005174,6.36e-07,6;UBERON:0001137,6.36e-07,6
|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,9.09963204616447,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,0.7813353445238,1.0470474879476,3.52938892818609,4.09827290975067,4.85510353031154,0,0,0,0,1.74420125104357,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0,3.23706337375356,1.05798195854407,1.90149421051854,0,0.889294796111139,0,0,0,0,1.53687322128622,4.87341177849845,5.13022565660425,4.6271491497304,1.99955689082663,1.98781686856452,4.16468717330844,2.77951865952885,9.19218786610021,6.60695285996332,6.38436690425939,6.45147439676223,3.03338461779446,2.37867873366265,4.16730696445408,3.90856198601933,7.87867654044352,6.26472815884921,2.94628585473668,4.6982654663704,3.16879057903011,0.151452386666368,0.226714680320357,0,0,0,0,0.649776417447669,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,1.48439043634778,0,0.593768556259299,0.520455980298408,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.251333182659351,0,0,0,0,0.220841518460394,0,0,6.14839673724249,8.79676168616511,0,0,0,0,4.94309110035915,5.03250663100489,4.64921102817598,3.65031072403781,2.55715457330331,4.77912502486988,5.353961681236,0,0,0,4.41927897361595,0.520481771850815,0.689706313300419,1.44049703844279,0.60281927134286,3.40182495756639,4.35586648968489,6.74652416830048,8.53721123438752,0.431135985865684,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,5.67782861123144,5.86556290561921,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0.444756087689741,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0.456994050438915,0,0,0,0.350679099451593,0,0,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0.324270453550071,0.823684239564244,1.43768206527355,1.48856379067401,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0.189491411770485,0.162964976442026,0.509235257325564,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,3.05046120976805,5.39173758324135,0,0,0,0.390438744296638,1.29254038639679,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.790575555893047,4.81981974632711,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0.590603785761546,0.307435147943927,0,0,0,0.316036757935816,0,0,3.40439605753788,0.36012218806262,0.517434735131018,0.857348140126369,0.354680467284547,0.535106452806212,0.658196082408484,1.2178597964584,0,0.42366414172764,0,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,5.93360966433631,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.203319467126849,0.648032044930808,0,0.218362563746178,0,0.247960367176008,0,0,0,54.6782150523665,0,0,0,0,0.168956125490778,0,0.13020438484395,0,2.65742532908607,36.8678408010068,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0.750729901804728,0,0.857473516316263,0,1.12950368523413,2.76195141904306,5.72895513439397,4.81188910562325,4.7955776383945,1.5107877947794,4.05013500139084,4.5032120322422,3.62513927187364,5.1776031175182,0.415149390336707,1.59609949360412,0.682934423016537,0.972426868273176,1.04806581313991,0.551530525350042,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,1.52087579934144,0.565879024158229,0.280924522409647,0.512201219238954,0.516919220600519,0.952587382566147,0.927074607558844,0,0.412085900803307,0.588795680537589,1.37147700954166,0.177475806159338,0.715308569841963,0.872078499793971,0.564656282491984,0.592302255241736,0.365855945745545,0.263069711437843,0.679020569229309,0,0.237270036248348,0.788035859004508,0.409231043169689,0.77468420592983,0.578719832943424,0.999242311751784,0.701794825336225,0.429742108096597,0.382576664137687,0,0.231867835620421
|phase1_expression=0.80074423552397,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0.137114433605739,0,9.09963204616447,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18531630736908,0.7813353445238,1.0470474879476,3.52938892818609,4.09827290975067,4.85510353031154,0,0,0,0,1.74420125104357,0.219686182734472,0.777719596297134,0.139986421625363,0,0,0,0,0,0,0,3.23706337375356,1.05798195854407,1.90149421051854,0,0.889294796111139,0,0,0,0,1.53687322128622,4.87341177849845,5.13022565660425,4.6271491497304,1.99955689082663,1.98781686856452,4.16468717330844,2.77951865952885,9.19218786610021,6.60695285996332,6.38436690425939,6.45147439676223,3.03338461779446,2.37867873366265,4.16730696445408,3.90856198601933,7.87867654044352,6.26472815884921,2.94628585473668,4.6982654663704,3.16879057903011,0.151452386666368,0.226714680320357,0,0,0,0,0.649776417447669,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,1.48439043634778,0,0.593768556259299,0.520455980298408,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.251333182659351,0,0,0,0,0.220841518460394,0,0,6.14839673724249,8.79676168616511,0,0,0,0,4.94309110035915,5.03250663100489,4.64921102817598,3.65031072403781,2.55715457330331,4.77912502486988,5.353961681236,0,0,0,4.41927897361595,0.520481771850815,0.689706313300419,1.44049703844279,0.60281927134286,3.40182495756639,4.35586648968489,6.74652416830048,8.53721123438752,0.431135985865684,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,5.67782861123144,5.86556290561921,0,0,0.213288250535234,0.232236671860439,0.515469845288373,0.201683524623343,0.444756087689741,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0.569003702859245,0.456994050438915,0,0,0,0.350679099451593,0,0,0,0.123397163921801,0.592905254174298,0,0,0,0,0,0.25462585178142,0,0.324270453550071,0.823684239564244,1.43768206527355,1.48856379067401,0,0.252578877947112,0.179397413521912,0.482443521363367,0,0.189491411770485,0.162964976442026,0.509235257325564,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0,0,0,0,0,0,3.05046120976805,5.39173758324135,0,0,0,0.390438744296638,1.29254038639679,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.790575555893047,4.81981974632711,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0.590603785761546,0.307435147943927,0,0,0,0.316036757935816,0,0,3.40439605753788,0.36012218806262,0.517434735131018,0.857348140126369,0.354680467284547,0.535106452806212,0.658196082408484,1.2178597964584,0,0.42366414172764,0,0,0.322928853391811,0.0603129249281559,0,0.164140899745061,0,5.93360966433631,0,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0.203319467126849,0.648032044930808,0,0.218362563746178,0,0.247960367176008,0,0,0,54.6782150523665,0,0,0,0,0.168956125490778,0,0.13020438484395,0,2.65742532908607,36.8678408010068,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.167884616364078,0,0.750729901804728,0,0.857473516316263,0,1.12950368523413,2.76195141904306,5.72895513439397,4.81188910562325,4.7955776383945,1.5107877947794,4.05013500139084,4.5032120322422,3.62513927187364,5.1776031175182,0.415149390336707,1.59609949360412,0.682934423016537,0.972426868273176,1.04806581313991,0.551530525350042,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,1.52087579934144,0.565879024158229,0.280924522409647,0.512201219238954,0.516919220600519,0.952587382566147,0.927074607558844,0,0.412085900803307,0.588795680537589,1.37147700954166,0.177475806159338,0.715308569841963,0.872078499793971,0.564656282491984,0.592302255241736,0.365855945745545,0.263069711437843,0.679020569229309,0,0.237270036248348,0.788035859004508,0.409231043169689,0.77468420592983,0.578719832943424,0.999242311751784,0.701794825336225,0.429742108096597,0.382576664137687,0,0.231867835620421
|short_description=p2@Fam123a
}}
}}

Latest revision as of 05:00, 26 September 2015

Short description:p2@Fam123a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Fam123a_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000022561, ENSMUST00000089421, NM_001164705, NM_028113, uc007ufb.2, uc011zmz.1_5end
EntrezGene:Fam123a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Fam123a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.16
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I28.80
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.94
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F14.65
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C63.40
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G86.75
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G15.87
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G554.68
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E236.87
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm4.38e-4064
neural plate4.38e-4064
presumptive neural plate4.38e-4064
regional part of nervous system1.02e-3954
neural tube7.50e-3752
neural rod7.50e-3752
future spinal cord7.50e-3752
neural keel7.50e-3752
central nervous system1.38e-3673
nervous system3.32e-3575
ectoderm-derived structure1.74e-3395
ectoderm1.74e-3395
presumptive ectoderm1.74e-3395
ecto-epithelium2.60e-3373
brain7.08e-3247
future brain7.08e-3247
gray matter1.13e-3134
regional part of brain1.08e-3046
pre-chordal neural plate7.67e-3049
brain grey matter4.80e-2729
regional part of telencephalon4.80e-2729
telencephalon4.80e-2729
anterior neural tube5.82e-2640
regional part of forebrain8.49e-2539
forebrain8.49e-2539
future forebrain8.49e-2539
structure with developmental contribution from neural crest2.11e-2392
cerebral cortex2.28e-1821
cerebral hemisphere2.28e-1821
pallium2.28e-1821
regional part of cerebral cortex4.33e-1417
tube2.47e-11114
posterior neural tube5.43e-1112
chordal neural plate5.43e-1112
occipital lobe6.43e-1110
visual cortex6.43e-1110
neocortex6.43e-1110
anatomical conduit8.47e-10122
basal ganglion8.99e-108
nuclear complex of neuraxis8.99e-108
aggregate regional part of brain8.99e-108
collection of basal ganglia8.99e-108
cerebral subcortex8.99e-108
epithelium5.39e-08174
cell layer9.51e-08176
spinal cord6.36e-076
dorsal region element6.36e-076
dorsum6.36e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr14:60997079..60997129,%2B&oldid=4234587"