FFCP PHASE1:Mm9::chr4:120689585..120689613,-: Difference between revisions
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{{FFCP|EntrezGene=69780|HGNC=|MCL_coexpression_id=491|UniProt=Q7TN29,B1AVZ1|association_with_transcript=238bp_to_ENSMUST00000043200,NM_133716,uc008unw.2_5end|description=CAGE_peak_4_at_Smap2_5end|id=chr4:120689585..120689613,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,4.97e-09,23;CL:0000337,4.97e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.76e-16!52;UBERON:0005068!1.76e-16!52;UBERON:0006241!1.76e-16!52;UBERON:0007135!1.76e-16!52;UBERON:0000955!6.35e-16!50;UBERON:0006238!6.35e-16!50;UBERON:0002616!2.01e-15!49;UBERON:0001017!2.76e-15!73;UBERON:0005743!2.76e-15!73;UBERON:0000073!2.07e-14!75;UBERON:0001016!2.07e-14!75;UBERON:0002020!2.38e-13!34;UBERON:0000033!8.21e-13!63;UBERON:0003080!1.49e-11!40;UBERON:0002791!4.61e-11!29;UBERON:0003528!4.61e-11!29;UBERON:0001893!4.61e-11!29;UBERON:0002780!5.92e-11!39;UBERON:0001890!5.92e-11!39;UBERON:0006240!5.92e-11!39;UBERON:0002346!1.63e-10!71;UBERON:0003075!1.63e-10!71;UBERON:0007284!1.63e-10!71;UBERON:0003056!1.68e-09!49;UBERON:0007811!8.60e-09!86;UBERON:0004121!9.11e-09!102;UBERON:0000924!9.11e-09!102;UBERON:0006601!9.11e-09!102;UBERON:0002619!1.82e-07!17;UBERON:0000956!6.55e-07!21;UBERON:0001869!6.55e-07!21;UBERON:0000203!6.55e-07!21;UBERON:0000153!9.20e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.36e-26,54;UBERON:0001049,2.40e-23,52;UBERON:0005068,2.40e-23,52;UBERON:0006241,2.40e-23,52;UBERON:0007135,2.40e-23,52;UBERON:0001017,1.91e-21,73;UBERON:0001016,1.51e-20,75;UBERON:0000955,1.17e-18,47;UBERON:0006238,1.17e-18,47;UBERON:0002346,4.74e-18,64;UBERON:0003075,4.74e-18,64;UBERON:0007284,4.74e-18,64;UBERON:0002020,5.67e-18,34;UBERON:0002616,9.05e-18,46;UBERON:0010371,1.60e-14,73;UBERON:0004121,1.62e-14,95;UBERON:0000924,1.62e-14,95;UBERON:0006601,1.62e-14,95;UBERON:0003528,1.19e-13,29;UBERON:0002791,1.19e-13,29;UBERON:0001893,1.19e-13,29;UBERON:0003080,1.99e-13,40;UBERON:0002780,2.10e-12,39;UBERON:0001890,2.10e-12,39;UBERON:0006240,2.10e-12,39;UBERON:0003076,9.86e-12,12;UBERON:0003057,9.86e-12,12;UBERON:0003056,1.41e-10,49;UBERON:0002021,3.69e-10,10;UBERON:0000411,3.69e-10,10;UBERON:0001950,3.69e-10,10;UBERON:0010314,1.89e-09,92;UBERON:0002420,8.30e-09,8;UBERON:0007245,8.30e-09,8;UBERON:0010009,8.30e-09,8;UBERON:0010011,8.30e-09,8;UBERON:0000454,8.30e-09,8;UBERON:0000025,3.32e-08,114;UBERON:0002619,6.68e-08,17;UBERON:0002950,2.72e-07,4;UBERON:0001891,2.72e-07,4;UBERON:0009616,2.72e-07,4;UBERON:0010286,2.72e-07,4;UBERON:0002240,2.73e-07,6;UBERON:0005174,2.73e-07,6;UBERON:0001137,2.73e-07,6;UBERON:0000956,3.38e-07,21;UBERON:0001869,3.38e-07,21;UBERON:0000203,3.38e-07,21;UBERON:0004111,5.27e-07,122|phase1_expression=0.320297694209588,1.04692622291808,0.909998478779072,0.60492842261366,0,0.503637815735669,0.700837921786577,1.03298658753261,0,0.468129052643987,0,0.558405112967355,0.171200729931206,0.174840804837995,0.666219523631325,0.607425802169478,1.39912375625629,0.946386496074713,1.50825876966313,0.84877930359606,1.53077922271926,0,0,0.799962113967033,0.91763712426868,0.57423196411502,2.15380998079537,0.646413698057667,0.190023419456374,0.252030129759931,0.443461021310609,1.27006134691926,2.46025915033828,0,0,0,0,0.418531630736908,1.5626706890476,0.523523743973798,1.76469446409304,0,0.485510353031154,0,0.405507724878058,0.917733760808408,1.56478268869608,0,0.659058548203415,0.777719596297134,0.419959264876088,1.43752564364972,1.51004345451963,0,0,0.514518872071894,0.573066879877513,0.515672092277442,0.809265843438391,0,0,1.35537812827653,0,0.899899717281399,0.988866362566974,1.4209602298922,0.898800331555214,2.30530983192933,0.207379224616955,0.405017814995072,0.210324961351382,1.99955689082663,1.54607978666129,0.489963196859816,0.383381884072945,1.83843757322004,4.40463523997555,6.00130489000382,7.0659005297872,0.659431438650969,1.82975287204819,2.08365348222704,8.93385596804419,11.2552522006336,8.09830713217094,1.17851434189467,1.99320353118744,1.3047961207771,0.075726193333184,0.0755715601067855,0,0,4.0798280022465,0,1.29955283489534,0.448026887097336,1.40444420131752,1.02258193546835,0.779358013808606,0,0.422530259330042,1.28326477414318,5.09610479413291,0,0,0,0,1.02765491747154,1.03575153458869,0,0.867426633830679,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.647067399789637,0.662524555381181,0,0,3.22058876712702,2.51336048176146,0.255457055208591,0.479260498023681,0.599902730993408,0.381210681219194,5.09288173976397,5.94750783664214,1.7591609295801,3.47648640384553,4.09144731728529,2.90903262383384,5.19172041816825,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.90422890701429,0.476255494059295,0.12811372028485,0.562210347358373,1.03481348295606,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0.702213187313235,0.772043721344145,0.284163499395593,0,0,0,0,0.787056926989615,0.154267112887378,0.465067889500816,0,0.350296027101508,0,0.492502392237286,0.4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69780 | |||
|HGNC= | |||
|MCL_coexpression_id=491 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TN29,B1AVZ1 | |||
|association_with_transcript=238bp_to_ENSMUST00000043200,NM_133716,uc008unw.2_5end | |||
|cluster_id=chr4:120689585..120689613,- | |||
|description=CAGE_peak_4_at_Smap2_5end | |||
|id=chr4:120689585..120689613,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.97e-09,23;CL:0000337,4.97e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.76e-16!52;UBERON:0005068!1.76e-16!52;UBERON:0006241!1.76e-16!52;UBERON:0007135!1.76e-16!52;UBERON:0000955!6.35e-16!50;UBERON:0006238!6.35e-16!50;UBERON:0002616!2.01e-15!49;UBERON:0001017!2.76e-15!73;UBERON:0005743!2.76e-15!73;UBERON:0000073!2.07e-14!75;UBERON:0001016!2.07e-14!75;UBERON:0002020!2.38e-13!34;UBERON:0000033!8.21e-13!63;UBERON:0003080!1.49e-11!40;UBERON:0002791!4.61e-11!29;UBERON:0003528!4.61e-11!29;UBERON:0001893!4.61e-11!29;UBERON:0002780!5.92e-11!39;UBERON:0001890!5.92e-11!39;UBERON:0006240!5.92e-11!39;UBERON:0002346!1.63e-10!71;UBERON:0003075!1.63e-10!71;UBERON:0007284!1.63e-10!71;UBERON:0003056!1.68e-09!49;UBERON:0007811!8.60e-09!86;UBERON:0004121!9.11e-09!102;UBERON:0000924!9.11e-09!102;UBERON:0006601!9.11e-09!102;UBERON:0002619!1.82e-07!17;UBERON:0000956!6.55e-07!21;UBERON:0001869!6.55e-07!21;UBERON:0000203!6.55e-07!21;UBERON:0000153!9.20e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.36e-26,54;UBERON:0001049,2.40e-23,52;UBERON:0005068,2.40e-23,52;UBERON:0006241,2.40e-23,52;UBERON:0007135,2.40e-23,52;UBERON:0001017,1.91e-21,73;UBERON:0001016,1.51e-20,75;UBERON:0000955,1.17e-18,47;UBERON:0006238,1.17e-18,47;UBERON:0002346,4.74e-18,64;UBERON:0003075,4.74e-18,64;UBERON:0007284,4.74e-18,64;UBERON:0002020,5.67e-18,34;UBERON:0002616,9.05e-18,46;UBERON:0010371,1.60e-14,73;UBERON:0004121,1.62e-14,95;UBERON:0000924,1.62e-14,95;UBERON:0006601,1.62e-14,95;UBERON:0003528,1.19e-13,29;UBERON:0002791,1.19e-13,29;UBERON:0001893,1.19e-13,29;UBERON:0003080,1.99e-13,40;UBERON:0002780,2.10e-12,39;UBERON:0001890,2.10e-12,39;UBERON:0006240,2.10e-12,39;UBERON:0003076,9.86e-12,12;UBERON:0003057,9.86e-12,12;UBERON:0003056,1.41e-10,49;UBERON:0002021,3.69e-10,10;UBERON:0000411,3.69e-10,10;UBERON:0001950,3.69e-10,10;UBERON:0010314,1.89e-09,92;UBERON:0002420,8.30e-09,8;UBERON:0007245,8.30e-09,8;UBERON:0010009,8.30e-09,8;UBERON:0010011,8.30e-09,8;UBERON:0000454,8.30e-09,8;UBERON:0000025,3.32e-08,114;UBERON:0002619,6.68e-08,17;UBERON:0002950,2.72e-07,4;UBERON:0001891,2.72e-07,4;UBERON:0009616,2.72e-07,4;UBERON:0010286,2.72e-07,4;UBERON:0002240,2.73e-07,6;UBERON:0005174,2.73e-07,6;UBERON:0001137,2.73e-07,6;UBERON:0000956,3.38e-07,21;UBERON:0001869,3.38e-07,21;UBERON:0000203,3.38e-07,21;UBERON:0004111,5.27e-07,122 | |||
|phase1_expression=0.320297694209588,1.04692622291808,0.909998478779072,0.60492842261366,0,0.503637815735669,0.700837921786577,1.03298658753261,0,0.468129052643987,0,0.558405112967355,0.171200729931206,0.174840804837995,0.666219523631325,0.607425802169478,1.39912375625629,0.946386496074713,1.50825876966313,0.84877930359606,1.53077922271926,0,0,0.799962113967033,0.91763712426868,0.57423196411502,2.15380998079537,0.646413698057667,0.190023419456374,0.252030129759931,0.443461021310609,1.27006134691926,2.46025915033828,0,0,0,0,0.418531630736908,1.5626706890476,0.523523743973798,1.76469446409304,0,0.485510353031154,0,0.405507724878058,0.917733760808408,1.56478268869608,0,0.659058548203415,0.777719596297134,0.419959264876088,1.43752564364972,1.51004345451963,0,0,0.514518872071894,0.573066879877513,0.515672092277442,0.809265843438391,0,0,1.35537812827653,0,0.899899717281399,0.988866362566974,1.4209602298922,0.898800331555214,2.30530983192933,0.207379224616955,0.405017814995072,0.210324961351382,1.99955689082663,1.54607978666129,0.489963196859816,0.383381884072945,1.83843757322004,4.40463523997555,6.00130489000382,7.0659005297872,0.659431438650969,1.82975287204819,2.08365348222704,8.93385596804419,11.2552522006336,8.09830713217094,1.17851434189467,1.99320353118744,1.3047961207771,0.075726193333184,0.0755715601067855,0,0,4.0798280022465,0,1.29955283489534,0.448026887097336,1.40444420131752,1.02258193546835,0.779358013808606,0,0.422530259330042,1.28326477414318,5.09610479413291,0,0,0,0,1.02765491747154,1.03575153458869,0,0.867426633830679,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.647067399789637,0.662524555381181,0,0,3.22058876712702,2.51336048176146,0.255457055208591,0.479260498023681,0.599902730993408,0.381210681219194,5.09288173976397,5.94750783664214,1.7591609295801,3.47648640384553,4.09144731728529,2.90903262383384,5.19172041816825,0.101839363850316,0.124406970610093,0.252722758433675,0,0.130120442962704,0,0.180062129805349,0.90422890701429,0.476255494059295,0.12811372028485,0.562210347358373,1.03481348295606,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0.702213187313235,0.772043721344145,0.284163499395593,0,0,0,0,0.787056926989615,0.154267112887378,0.465067889500816,0,0.350296027101508,0,0.492502392237286,0.405344047729279,0.730999937126662,0,0.536825675041487,3.78521907415429,0.617427674275707,0,1.05780226665418,0,0,0.128867461322093,0,0.444756087689741,0.380451252225118,0,0.658795818896044,0.251335208800269,0.397912944082302,0.38992817423824,0,0,0,0.189667900953082,0.342745537829186,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0.592905254174298,0.667380422864376,1.17935397067922,0.449724224769707,0.202860121388503,0.72353147925725,0.763877555344259,0,0.648540907100142,1.09824565275233,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0,0,0.585400943573396,0,0.221464689648775,0.318909537314974,0,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,3.53211297973142,4.33683240391152,0.491804836130026,1.51482556322624,0.315508219416257,0,0,0.238968797952552,0,0.566153061577665,0.404810701674894,0,0.790575555893047,1.60660658210904,0,0,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0.363533729477506,0.712994756769443,0,2.10837217149998,0,0.340439605753788,0,0.129358683782755,0.643011105094777,0.354680467284547,0.713475270408282,0.493647061806363,1.2178597964584,0.938686832254841,0,0,0,0.322928853391811,0.361877549568935,0,0,0,5.56275906031529,0.512612642393558,0.206386867963223,0.370389054739423,0.565105371014073,0.683471138605126,0.686334519619568,1.69978429993855,0.559805809294632,0.967399816630967,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.247960367176008,0,0.259229946583586,0.621339313086926,0.56369293868419,0.149516546043979,0.330916980914195,0.388902376688095,0,0,0.234714477291508,0.13020438484395,0,0.724752362478018,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.537080087002444,0.198681354781265,0.360586348559907,0.443068581523732,0.201932899896295,0.304827226619999,0,0.292373642219257,0.288635524920988,0.233753804363138,0,0.665957860122194,0.269141569828427,0,0.386379188064381,0,0.183151624267265,0,0,3.3885110557024,1.38097570952153,3.43737308063638,2.749650917499,4.7955776383945,2.2661816921691,3.37511250115903,1.80128481289688,0.906284817968409,2.07104124700728,0,0,0.512200817262403,0.243106717068294,1.04806581313991,0.735374033800057,0,0,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,0.280924522409647,0.512201219238954,0.34461281373368,1.42888107384922,0.463537303779422,0.38581844092741,0,0,0.342869252385415,0.177475806159338,0.476872379894642,0.581385666529314,0.282328141245992,0.507687647350059,0.548783918618318,0,0.135804113845862,0.561142271657738,0.830445126869219,0.492522411877817,1.22769312950907,0.309873682371932,0.578719832943424,0.749431733813838,0,0.429742108096597,0.19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| |||
|short_description=p4@Smap2 | |||
}} |
Latest revision as of 07:01, 26 September 2015
Short description: | p4@Smap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Smap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:491 |
Association with transcript: | 238bp_to_ENSMUST00000043200, NM_133716, uc008unw.2_5end |
EntrezGene: | Smap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.97e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.97e-09 | 23 |