FFCP PHASE1:Mm9::chr7:19867928..19867958,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20167|HGNC=|MCL_coexpression_id=22|UniProt=O70622|association_with_transcript=-52bp_to_ENSMUST00000032559_5end|description=CAGE_peak_3_at_Rtn2_5end|id=chr7:19867928..19867958,+|ontology_enrichment_celltype=CL:0000117!1.78e-18!23;CL:0000337!1.78e-18!23;CL:0000540!3.38e-17!33;CL:0000047!3.38e-17!33;CL:0000031!3.38e-17!33;CL:0000404!3.38e-17!33;CL:0000221!1.46e-13!44;CL:0000133!1.46e-13!44;CL:0002319!2.16e-13!43;CL:0000393!1.51e-12!39;CL:0000211!1.51e-12!39;CL:0000055!1.11e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.17e-28,23;CL:0000337,6.17e-28,23;CL:0000540,1.08e-21,33;CL:0000047,1.08e-21,33;CL:0000031,1.08e-21,33;CL:0000404,1.08e-21,33;CL:0000393,4.87e-17,39;CL:0000211,4.87e-17,39;CL:0002319,1.11e-14,43;CL:0000221,3.68e-14,44;CL:0000133,3.68e-14,44;CL:0002609,3.74e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.04e-33!75;UBERON:0001016!1.04e-33!75;UBERON:0001017!1.97e-33!73;UBERON:0005743!1.97e-33!73;UBERON:0002346!5.23e-33!71;UBERON:0003075!5.23e-33!71;UBERON:0007284!5.23e-33!71;UBERON:0004121!1.45e-32!102;UBERON:0000924!1.45e-32!102;UBERON:0006601!1.45e-32!102;UBERON:0001049!3.36e-30!52;UBERON:0005068!3.36e-30!52;UBERON:0006241!3.36e-30!52;UBERON:0007135!3.36e-30!52;UBERON:0000033!2.58e-29!63;UBERON:0000955!7.02e-28!50;UBERON:0006238!7.02e-28!50;UBERON:0002616!4.29e-27!49;UBERON:0003056!1.38e-26!49;UBERON:0003080!8.40e-24!40;UBERON:0002780!2.80e-23!39;UBERON:0001890!2.80e-23!39;UBERON:0006240!2.80e-23!39;UBERON:0002020!5.22e-23!34;UBERON:0002791!4.49e-19!29;UBERON:0003528!4.49e-19!29;UBERON:0001893!4.49e-19!29;UBERON:0007811!2.67e-16!86;UBERON:0000153!3.68e-14!94;UBERON:0000956!2.08e-13!21;UBERON:0001869!2.08e-13!21;UBERON:0000203!2.08e-13!21;UBERON:0002619!3.36e-10!17;UBERON:0002021!1.20e-08!10;UBERON:0000411!1.20e-08!10;UBERON:0001950!1.20e-08!10;UBERON:0002420!6.93e-07!8;UBERON:0007245!6.93e-07!8;UBERON:0010009!6.93e-07!8;UBERON:0010011!6.93e-07!8;UBERON:0000454!6.93e-07!8;UBERON:0003076!7.76e-07!12;UBERON:0003057!7.76e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.02e-39,54;UBERON:0002346,1.58e-39,64;UBERON:0003075,1.58e-39,64;UBERON:0007284,1.58e-39,64;UBERON:0001017,2.73e-39,73;UBERON:0001049,4.60e-38,52;UBERON:0005068,4.60e-38,52;UBERON:0006241,4.60e-38,52;UBERON:0007135,4.60e-38,52;UBERON:0001016,8.22e-38,75;UBERON:0002020,6.46e-36,34;UBERON:0004121,1.99e-34,95;UBERON:0000924,1.99e-34,95;UBERON:0006601,1.99e-34,95;UBERON:0003056,4.99e-33,49;UBERON:0010371,9.26e-33,73;UBERON:0000955,5.40e-32,47;UBERON:0006238,5.40e-32,47;UBERON:0003080,6.46e-31,40;UBERON:0002616,7.59e-31,46;UBERON:0002780,4.17e-30,39;UBERON:0001890,4.17e-30,39;UBERON:0006240,4.17e-30,39;UBERON:0003528,9.77e-30,29;UBERON:0002791,9.77e-30,29;UBERON:0001893,9.77e-30,29;UBERON:0010314,7.20e-23,92;UBERON:0000956,7.54e-21,21;UBERON:0001869,7.54e-21,21;UBERON:0000203,7.54e-21,21;UBERON:0002619,8.38e-16,17;UBERON:0002021,1.33e-12,10;UBERON:0000411,1.33e-12,10;UBERON:0001950,1.33e-12,10;UBERON:0000025,3.25e-10,114;UBERON:0002420,7.25e-10,8;UBERON:0007245,7.25e-10,8;UBERON:0010009,7.25e-10,8;UBERON:0010011,7.25e-10,8;UBERON:0000454,7.25e-10,8;UBERON:0004111,9.17e-09,122;UBERON:0002240,4.02e-08,6;UBERON:0005174,4.02e-08,6;UBERON:0001137,4.02e-08,6;UBERON:0000369,1.67e-07,5;UBERON:0002435,1.67e-07,5;UBERON:0000204,1.67e-07,5;UBERON:0010082,1.67e-07,5;UBERON:0003076,1.95e-07,12;UBERON:0003057,1.95e-07,12;UBERON:0001948,3.52e-07,5;UBERON:0002315,3.52e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,12.1389876515759,9.52183762689659,9.50747105259269,0,0,0,0,0,0,0.768436610643109,8.29516898467821,7.42532660824299,8.62332341540666,4.28476476605705,4.41737081903227,6.73699395682247,6.42164655822184,8.27296907949019,1.10115880999389,1.65993539510744,2.30409799884365,11.0784481693363,11.7104183811084,8.85552729946492,2.23346399201105,1.12552522006336,2.59757021220577,4.71405736757868,4.41352210477219,7.64237727883732,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0,0,0,1.75668478206928,0.83778682725382,0,0,0,0,1.3481157546434,1.37250180845588,6.53402630986895,4.86708096538374,4.09144731728529,2.0778804455956,1.94689515681309,0,0.124406970610093,0,0,0.520481771850815,1.14951052216736,1.26043490863744,1.35634336052144,1.15662048557257,1.66547836370305,3.5606655332697,0.517406741478031,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,6.5858951922742,0,0,0.639864751605702,0,0,0.403367049246685,0,0,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.9266070798535,2.10981035865966,0,0,0.94652465824877,0,1.07711698866399,0.477937595905104,0,0,0.809621403349789,1.16902343164525,1.58115111178609,4.17717711348349,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.540183282093931,1.55230420539305,0.428674070063185,0.886701168211368,1.07021290561242,1.31639216481697,1.8267896946876,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0.436725127492355,0,0,0,0,0,0,0,0.330916980914195,0,0.258319646955462,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0.503653849092235,0.19318959403219,0,0,0,0,5.0827665835536,4.60325236507177,5.15605962095457,3.26521046453006,4.11049511862385,3.7769694869485,2.70009000092722,7.65546045481175,4.98456649882625,5.1776031175182,0.62272408550506,0.798049746802062,2.21953687480374,0.486213434136588,1.88651846365184,0.919217542250071,1.55572709461131,1.03017528619447,1.28367683836726,0.252697211763798,1.77435509923168,1.13175804831646,0.936415074698824,1.6646539625266,1.09127391015665,0,0.695305955669133,1.54327376370964,1.23625770240992,0.147198920134397,0.342869252385415,1.4198064492747,0.715308569841963,1.16277133305863,0.470546902076653,1.26921911837515,0.73171189149109,1.31534855718921,0.814824683075171,0,1.06771516311757,1.0835493061312,0.409231043169689,0.619747364743864,0.578719832943424,3.99696924700713,0.935726433781634,0.429742108096597,0,0,0.231867835620421|short_description=p3@Rtn2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20167 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=O70622 | |||
|association_with_transcript=-52bp_to_ENSMUST00000032559_5end | |||
|cluster_id=chr7:19867928..19867958,+ | |||
|description=CAGE_peak_3_at_Rtn2_5end | |||
|id=chr7:19867928..19867958,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.78e-18!23;CL:0000337!1.78e-18!23;CL:0000540!3.38e-17!33;CL:0000047!3.38e-17!33;CL:0000031!3.38e-17!33;CL:0000404!3.38e-17!33;CL:0000221!1.46e-13!44;CL:0000133!1.46e-13!44;CL:0002319!2.16e-13!43;CL:0000393!1.51e-12!39;CL:0000211!1.51e-12!39;CL:0000055!1.11e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.17e-28,23;CL:0000337,6.17e-28,23;CL:0000540,1.08e-21,33;CL:0000047,1.08e-21,33;CL:0000031,1.08e-21,33;CL:0000404,1.08e-21,33;CL:0000393,4.87e-17,39;CL:0000211,4.87e-17,39;CL:0002319,1.11e-14,43;CL:0000221,3.68e-14,44;CL:0000133,3.68e-14,44;CL:0002609,3.74e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.04e-33!75;UBERON:0001016!1.04e-33!75;UBERON:0001017!1.97e-33!73;UBERON:0005743!1.97e-33!73;UBERON:0002346!5.23e-33!71;UBERON:0003075!5.23e-33!71;UBERON:0007284!5.23e-33!71;UBERON:0004121!1.45e-32!102;UBERON:0000924!1.45e-32!102;UBERON:0006601!1.45e-32!102;UBERON:0001049!3.36e-30!52;UBERON:0005068!3.36e-30!52;UBERON:0006241!3.36e-30!52;UBERON:0007135!3.36e-30!52;UBERON:0000033!2.58e-29!63;UBERON:0000955!7.02e-28!50;UBERON:0006238!7.02e-28!50;UBERON:0002616!4.29e-27!49;UBERON:0003056!1.38e-26!49;UBERON:0003080!8.40e-24!40;UBERON:0002780!2.80e-23!39;UBERON:0001890!2.80e-23!39;UBERON:0006240!2.80e-23!39;UBERON:0002020!5.22e-23!34;UBERON:0002791!4.49e-19!29;UBERON:0003528!4.49e-19!29;UBERON:0001893!4.49e-19!29;UBERON:0007811!2.67e-16!86;UBERON:0000153!3.68e-14!94;UBERON:0000956!2.08e-13!21;UBERON:0001869!2.08e-13!21;UBERON:0000203!2.08e-13!21;UBERON:0002619!3.36e-10!17;UBERON:0002021!1.20e-08!10;UBERON:0000411!1.20e-08!10;UBERON:0001950!1.20e-08!10;UBERON:0002420!6.93e-07!8;UBERON:0007245!6.93e-07!8;UBERON:0010009!6.93e-07!8;UBERON:0010011!6.93e-07!8;UBERON:0000454!6.93e-07!8;UBERON:0003076!7.76e-07!12;UBERON:0003057!7.76e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.02e-39,54;UBERON:0002346,1.58e-39,64;UBERON:0003075,1.58e-39,64;UBERON:0007284,1.58e-39,64;UBERON:0001017,2.73e-39,73;UBERON:0001049,4.60e-38,52;UBERON:0005068,4.60e-38,52;UBERON:0006241,4.60e-38,52;UBERON:0007135,4.60e-38,52;UBERON:0001016,8.22e-38,75;UBERON:0002020,6.46e-36,34;UBERON:0004121,1.99e-34,95;UBERON:0000924,1.99e-34,95;UBERON:0006601,1.99e-34,95;UBERON:0003056,4.99e-33,49;UBERON:0010371,9.26e-33,73;UBERON:0000955,5.40e-32,47;UBERON:0006238,5.40e-32,47;UBERON:0003080,6.46e-31,40;UBERON:0002616,7.59e-31,46;UBERON:0002780,4.17e-30,39;UBERON:0001890,4.17e-30,39;UBERON:0006240,4.17e-30,39;UBERON:0003528,9.77e-30,29;UBERON:0002791,9.77e-30,29;UBERON:0001893,9.77e-30,29;UBERON:0010314,7.20e-23,92;UBERON:0000956,7.54e-21,21;UBERON:0001869,7.54e-21,21;UBERON:0000203,7.54e-21,21;UBERON:0002619,8.38e-16,17;UBERON:0002021,1.33e-12,10;UBERON:0000411,1.33e-12,10;UBERON:0001950,1.33e-12,10;UBERON:0000025,3.25e-10,114;UBERON:0002420,7.25e-10,8;UBERON:0007245,7.25e-10,8;UBERON:0010009,7.25e-10,8;UBERON:0010011,7.25e-10,8;UBERON:0000454,7.25e-10,8;UBERON:0004111,9.17e-09,122;UBERON:0002240,4.02e-08,6;UBERON:0005174,4.02e-08,6;UBERON:0001137,4.02e-08,6;UBERON:0000369,1.67e-07,5;UBERON:0002435,1.67e-07,5;UBERON:0000204,1.67e-07,5;UBERON:0010082,1.67e-07,5;UBERON:0003076,1.95e-07,12;UBERON:0003057,1.95e-07,12;UBERON:0001948,3.52e-07,5;UBERON:0002315,3.52e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,12.1389876515759,9.52183762689659,9.50747105259269,0,0,0,0,0,0,0.768436610643109,8.29516898467821,7.42532660824299,8.62332341540666,4.28476476605705,4.41737081903227,6.73699395682247,6.42164655822184,8.27296907949019,1.10115880999389,1.65993539510744,2.30409799884365,11.0784481693363,11.7104183811084,8.85552729946492,2.23346399201105,1.12552522006336,2.59757021220577,4.71405736757868,4.41352210477219,7.64237727883732,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0,0,0,1.75668478206928,0.83778682725382,0,0,0,0,1.3481157546434,1.37250180845588,6.53402630986895,4.86708096538374,4.09144731728529,2.0778804455956,1.94689515681309,0,0.124406970610093,0,0,0.520481771850815,1.14951052216736,1.26043490863744,1.35634336052144,1.15662048557257,1.66547836370305,3.5606655332697,0.517406741478031,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,6.5858951922742,0,0,0.639864751605702,0,0,0.403367049246685,0,0,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,1.9266070798535,2.10981035865966,0,0,0.94652465824877,0,1.07711698866399,0.477937595905104,0,0,0.809621403349789,1.16902343164525,1.58115111178609,4.17717711348349,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.540183282093931,1.55230420539305,0.428674070063185,0.886701168211368,1.07021290561242,1.31639216481697,1.8267896946876,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,2.59595422814714,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0.436725127492355,0,0,0,0,0,0,0,0.330916980914195,0,0.258319646955462,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0.503653849092235,0.19318959403219,0,0,0,0,5.0827665835536,4.60325236507177,5.15605962095457,3.26521046453006,4.11049511862385,3.7769694869485,2.70009000092722,7.65546045481175,4.98456649882625,5.1776031175182,0.62272408550506,0.798049746802062,2.21953687480374,0.486213434136588,1.88651846365184,0.919217542250071,1.55572709461131,1.03017528619447,1.28367683836726,0.252697211763798,1.77435509923168,1.13175804831646,0.936415074698824,1.6646539625266,1.09127391015665,0,0.695305955669133,1.54327376370964,1.23625770240992,0.147198920134397,0.342869252385415,1.4198064492747,0.715308569841963,1.16277133305863,0.470546902076653,1.26921911837515,0.73171189149109,1.31534855718921,0.814824683075171,0,1.06771516311757,1.0835493061312,0.409231043169689,0.619747364743864,0.578719832943424,3.99696924700713,0.935726433781634,0.429742108096597,0,0,0.231867835620421 | |||
|short_description=p3@Rtn2 | |||
}} |
Latest revision as of 08:16, 26 September 2015
Short description: | p3@Rtn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rtn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -52bp_to_ENSMUST00000032559_5end |
EntrezGene: | Rtn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.17e-28 | 23 |
neuroblast (sensu Vertebrata) | 6.17e-28 | 23 |
neuron | 1.08e-21 | 33 |
neuronal stem cell | 1.08e-21 | 33 |
neuroblast | 1.08e-21 | 33 |
electrically signaling cell | 1.08e-21 | 33 |
electrically responsive cell | 4.87e-17 | 39 |
electrically active cell | 4.87e-17 | 39 |
neural cell | 1.11e-14 | 43 |
ectodermal cell | 3.68e-14 | 44 |
neurectodermal cell | 3.68e-14 | 44 |
neuron of cerebral cortex | 3.74e-09 | 6 |