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FFCP PHASE1:Mm9::chr10:84218800..84218829,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71137
|EntrezGene=71137
|HGNC=
|HGNC=
|MCL_coexpression_id=2593
|TSSclassifier=NA
|UniProt=Q7TNK1
|UniProt=Q7TNK1
|association_with_transcript=0bp_to_ENSMUST00000060397_5end
|association_with_transcript=0bp_to_ENSMUST00000060397_5end
|cluster_id=chr10:84218800..84218829,+
|description=CAGE_peak_2_at_Rfx4_5end
|description=CAGE_peak_2_at_Rfx4_5end
|id=chr10:84218800..84218829,+
|id=chr10:84218800..84218829,+
|ontology_enrichment_celltype=CL:0000117!6.98e-17!23;CL:0000337!6.98e-17!23;CL:0002319!5.61e-16!43;CL:0000221!2.54e-15!44;CL:0000133!2.54e-15!44;CL:0000055!5.52e-12!50;CL:0000540!1.27e-10!33;CL:0000047!1.27e-10!33;CL:0000031!1.27e-10!33;CL:0000404!1.27e-10!33;CL:0002453!7.61e-08!8;CL:0000393!1.08e-07!39;CL:0000211!1.08e-07!39
|ontology_enrichment_celltype=CL:0000117!6.98e-17!23;CL:0000337!6.98e-17!23;CL:0002319!5.61e-16!43;CL:0000221!2.54e-15!44;CL:0000133!2.54e-15!44;CL:0000055!5.52e-12!50;CL:0000540!1.27e-10!33;CL:0000047!1.27e-10!33;CL:0000031!1.27e-10!33;CL:0000404!1.27e-10!33;CL:0002453!7.61e-08!8;CL:0000393!1.08e-07!39;CL:0000211!1.08e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-21,23;CL:0000337,1.54e-21,23;CL:0002319,7.21e-18,43;CL:0000221,3.08e-17,44;CL:0000133,3.08e-17,44;CL:0000540,8.97e-13,33;CL:0000047,8.97e-13,33;CL:0000031,8.97e-13,33;CL:0000404,8.97e-13,33;CL:0000393,9.47e-10,39;CL:0000211,9.47e-10,39;CL:0002453,3.66e-08,8;CL:0002321,1.81e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.20e-42!73;UBERON:0005743!1.20e-42!73;UBERON:0000073!6.85e-42!75;UBERON:0001016!6.85e-42!75;UBERON:0001049!7.29e-40!52;UBERON:0005068!7.29e-40!52;UBERON:0006241!7.29e-40!52;UBERON:0007135!7.29e-40!52;UBERON:0000955!1.01e-38!50;UBERON:0006238!1.01e-38!50;UBERON:0002616!6.73e-38!49;UBERON:0000033!6.08e-34!63;UBERON:0002346!3.17e-30!71;UBERON:0003075!3.17e-30!71;UBERON:0007284!3.17e-30!71;UBERON:0003080!5.07e-30!40;UBERON:0004121!7.18e-30!102;UBERON:0000924!7.18e-30!102;UBERON:0006601!7.18e-30!102;UBERON:0003056!4.75e-29!49;UBERON:0002780!5.67e-29!39;UBERON:0001890!5.67e-29!39;UBERON:0006240!5.67e-29!39;UBERON:0002020!1.93e-24!34;UBERON:0002791!6.82e-21!29;UBERON:0003528!6.82e-21!29;UBERON:0001893!6.82e-21!29;UBERON:0000153!3.70e-19!94;UBERON:0007811!4.88e-19!86;UBERON:0000956!3.95e-15!21;UBERON:0001869!3.95e-15!21;UBERON:0000203!3.95e-15!21;UBERON:0002619!7.57e-13!17;UBERON:0003076!9.12e-10!12;UBERON:0003057!9.12e-10!12;UBERON:0001894!8.48e-09!10;UBERON:0006222!8.48e-09!10;UBERON:0002021!3.73e-08!10;UBERON:0000411!3.73e-08!10;UBERON:0001950!3.73e-08!10;UBERON:0000025!4.35e-08!114;UBERON:0000007!4.30e-07!8;UBERON:0003296!4.30e-07!8;UBERON:0010133!4.30e-07!8;UBERON:0002420!6.34e-07!8;UBERON:0007245!6.34e-07!8;UBERON:0010009!6.34e-07!8;UBERON:0010011!6.34e-07!8;UBERON:0000454!6.34e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.63e-53,73;UBERON:0000073,1.61e-52,54;UBERON:0001016,7.26e-51,75;UBERON:0001049,6.92e-50,52;UBERON:0005068,6.92e-50,52;UBERON:0006241,6.92e-50,52;UBERON:0007135,6.92e-50,52;UBERON:0000955,1.27e-44,47;UBERON:0006238,1.27e-44,47;UBERON:0002616,1.42e-43,46;UBERON:0002346,2.65e-40,64;UBERON:0003075,2.65e-40,64;UBERON:0007284,2.65e-40,64;UBERON:0003080,1.04e-38,40;UBERON:0004121,1.47e-38,95;UBERON:0000924,1.47e-38,95;UBERON:0006601,1.47e-38,95;UBERON:0002780,2.43e-37,39;UBERON:0001890,2.43e-37,39;UBERON:0006240,2.43e-37,39;UBERON:0010371,3.06e-33,73;UBERON:0003056,5.44e-32,49;UBERON:0002020,2.05e-31,34;UBERON:0003528,8.89e-27,29;UBERON:0002791,8.89e-27,29;UBERON:0001893,8.89e-27,29;UBERON:0010314,6.17e-23,92;UBERON:0000956,2.99e-19,21;UBERON:0001869,2.99e-19,21;UBERON:0000203,2.99e-19,21;UBERON:0002619,2.84e-16,17;UBERON:0000025,5.38e-14,114;UBERON:0004111,4.25e-12,122;UBERON:0001894,5.38e-11,10;UBERON:0006222,5.38e-11,10;UBERON:0003076,9.53e-11,12;UBERON:0003057,9.53e-11,12;UBERON:0002021,3.69e-10,10;UBERON:0000411,3.69e-10,10;UBERON:0001950,3.69e-10,10;UBERON:0000007,8.87e-09,8;UBERON:0003296,8.87e-09,8;UBERON:0010133,8.87e-09,8;UBERON:0002420,1.47e-08,8;UBERON:0007245,1.47e-08,8;UBERON:0010009,1.47e-08,8;UBERON:0010011,1.47e-08,8;UBERON:0000454,1.47e-08,8;UBERON:0011216,2.59e-08,194;UBERON:0001954,1.55e-07,7;UBERON:0003022,1.55e-07,7;UBERON:0002421,1.55e-07,7;UBERON:0000349,1.55e-07,7;UBERON:0002600,1.55e-07,7
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,20.2763395433815,6.81027166476863,15.748821825017,14.1386285841616,20.125359011096,0,0,0,0,0,0,9.91350658212029,7.40587370980846,7.60597684207415,0.677689064138264,0.889294796111139,0,0,0,8.98800331555214,21.9004434033286,4.14758449233911,4.45519596494579,3.36519938162211,5.14171771926846,5.74258206474195,5.14461356702807,4.79227355091182,7.35375029288017,11.0115880999389,8.81042632787795,11.2132769277058,7.91317726381163,7.22752384459036,8.85552729946492,8.93385596804419,9.56696437053856,9.47349136216223,10.0173719061047,10.2507610175354,5.03278503728312,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2473278954042,5.44561437714983,0,0,0,0,14.8292733010774,6.8625090422794,4.14659361972453,9.38651329038293,7.92717917724025,14.9607392082883,9.08551073179443,0,0,0,1.05220927943237,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.0937017245597288,1.03481348295606,0.862271971731369,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5144974282064,5.86556290561921,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2018448390722,11.2523219128515,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,7.71171159412337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5536277783674,1.26042765821917,2.32845630808958,5.78709994585299,13.3005175231705,13.1992925025532,13.1639216481697,7.61162372786498,0,0,0,0,0,0,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,7.82552902062201,6.30185064783336,12.0297227640581,5.48066015816514,9.06472676867641,6.07520250208625,6.75481804836331,9.9691329976525,4.65984280576638,6.53860289780313,6.3843979744165,2.39027048055788,1.21553358534147,1.25767897576789,1.10306105070008,1.11123363900808,0.824140228955577,1.28367683836726,0.758091635291392,0.50695859978048,0.377252682772152,1.12369808963859,1.21647789569252,0.861532034334199,0.476293691283074,0.463537303779422,0.77163688185482,0.412085900803307,0.735994600671987,1.37147700954166,0.887379030796687,0.476872379894642,1.30811774969096,1.12931256498397,1.01537529470012,0.914639864363863,1.57841826862706,0.271608227691724,1.68342681497322,0.830445126869219,0.985044823755635,1.22769312950907,0.619747364743864,0.385813221962283,1.99848462350357,1.87145286756327,1.28922632428979,0.382576664137687,0.441182838239031,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,20.2763395433815,6.81027166476863,15.748821825017,14.1386285841616,20.125359011096,0,0,0,0,0,0,9.91350658212029,7.40587370980846,7.60597684207415,0.677689064138264,0.889294796111139,0,0,0,8.98800331555214,21.9004434033286,4.14758449233911,4.45519596494579,3.36519938162211,5.14171771926846,5.74258206474195,5.14461356702807,4.79227355091182,7.35375029288017,11.0115880999389,8.81042632787795,11.2132769277058,7.91317726381163,7.22752384459036,8.85552729946492,8.93385596804419,9.56696437053856,9.47349136216223,10.0173719061047,10.2507610175354,5.03278503728312,0,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2473278954042,5.44561437714983,0,0,0,0,14.8292733010774,6.8625090422794,4.14659361972453,9.38651329038293,7.92717917724025,14.9607392082883,9.08551073179443,0,0,0,1.05220927943237,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0.384341160854549,0.0937017245597288,1.03481348295606,0.862271971731369,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5144974282064,5.86556290561921,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2018448390722,11.2523219128515,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,7.71171159412337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5536277783674,1.26042765821917,2.32845630808958,5.78709994585299,13.3005175231705,13.1992925025532,13.1639216481697,7.61162372786498,0,0,0,0,0,0,0,0,0,9.27126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,7.82552902062201,6.30185064783336,12.0297227640581,5.48066015816514,9.06472676867641,6.07520250208625,6.75481804836331,9.9691329976525,4.65984280576638,6.53860289780313,6.3843979744165,2.39027048055788,1.21553358534147,1.25767897576789,1.10306105070008,1.11123363900808,0.824140228955577,1.28367683836726,0.758091635291392,0.50695859978048,0.377252682772152,1.12369808963859,1.21647789569252,0.861532034334199,0.476293691283074,0.463537303779422,0.77163688185482,0.412085900803307,0.735994600671987,1.37147700954166,0.887379030796687,0.476872379894642,1.30811774969096,1.12931256498397,1.01537529470012,0.914639864363863,1.57841826862706,0.271608227691724,1.68342681497322,0.830445126869219,0.985044823755635,1.22769312950907,0.619747364743864,0.385813221962283,1.99848462350357,1.87145286756327,1.28922632428979,0.382576664137687,0.441182838239031,0
|short_description=p2@Rfx4
|short_description=p2@Rfx4
}}
}}

Latest revision as of 12:12, 26 September 2015

Short description:p2@Rfx4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rfx4_5end
Coexpression cluster:MCL_coexpression_mm9:2593
Association with transcript: 0bp_to_ENSMUST00000060397_5end
EntrezGene:Rfx4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rfx4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.28
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C88.99
Mouse Microglia, donor2.CNhs12634.11736-123E821.90
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.74
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.21
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.23
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A414.83
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F14.15
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F27.93
diencephalon, adult.CNhs10482.20-12F214.96
diencephalon, neonate N30.CNhs11201.1388-42B29.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G15.87
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C212.20
medulla oblongata, neonate N30.CNhs11200.1396-42A311.25
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B913.30
pituitary gland, embryo E16.CNhs11036.449-43F613.20
pituitary gland, embryo E17.CNhs11039.1265-44F513.16
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I86.54
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system8.63e-5373
regional part of nervous system1.61e-5254
nervous system7.26e-5175
neural tube6.92e-5052
neural rod6.92e-5052
future spinal cord6.92e-5052
neural keel6.92e-5052
brain1.27e-4447
future brain1.27e-4447
regional part of brain1.42e-4346
neurectoderm2.65e-4064
neural plate2.65e-4064
presumptive neural plate2.65e-4064
anterior neural tube1.04e-3840
ectoderm-derived structure1.47e-3895
ectoderm1.47e-3895
presumptive ectoderm1.47e-3895
regional part of forebrain2.43e-3739
forebrain2.43e-3739
future forebrain2.43e-3739
ecto-epithelium3.06e-3373
pre-chordal neural plate5.44e-3249
gray matter2.05e-3134
brain grey matter8.89e-2729
regional part of telencephalon8.89e-2729
telencephalon8.89e-2729
structure with developmental contribution from neural crest6.17e-2392
cerebral cortex2.99e-1921
cerebral hemisphere2.99e-1921
pallium2.99e-1921
regional part of cerebral cortex2.84e-1617
tube5.38e-14114
anatomical conduit4.25e-12122
diencephalon5.38e-1110
future diencephalon5.38e-1110
posterior neural tube9.53e-1112
chordal neural plate9.53e-1112
occipital lobe3.69e-1010
visual cortex3.69e-1010
neocortex3.69e-1010
pituitary gland8.87e-098
gland of diencephalon8.87e-098
neuroendocrine gland8.87e-098
basal ganglion1.47e-088
nuclear complex of neuraxis1.47e-088
aggregate regional part of brain1.47e-088
collection of basal ganglia1.47e-088
cerebral subcortex1.47e-088
organ system subdivision2.59e-08194
Ammon's horn1.55e-077
lobe parts of cerebral cortex1.55e-077
hippocampal formation1.55e-077
limbic system1.55e-077
limbic lobe1.55e-077
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