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FFCP PHASE1:Mm9::chr10:84218895..84218909,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71137
|EntrezGene=71137
|HGNC=
|HGNC=
|MCL_coexpression_id=2593
|TSSclassifier=NA
|UniProt=Q7TNK1
|UniProt=Q7TNK1
|association_with_transcript=88bp_to_ENSMUST00000060397_5end
|association_with_transcript=88bp_to_ENSMUST00000060397_5end
|cluster_id=chr10:84218895..84218909,+
|description=CAGE_peak_1_at_Rfx4_5end
|description=CAGE_peak_1_at_Rfx4_5end
|id=chr10:84218895..84218909,+
|id=chr10:84218895..84218909,+
|ontology_enrichment_celltype=CL:0000117!1.14e-18!23;CL:0000337!1.14e-18!23;CL:0002319!5.93e-16!43;CL:0000221!2.62e-15!44;CL:0000133!2.62e-15!44;CL:0000055!5.05e-12!50;CL:0000540!2.70e-10!33;CL:0000047!2.70e-10!33;CL:0000031!2.70e-10!33;CL:0000404!2.70e-10!33;CL:0002453!3.04e-08!8;CL:0000393!1.75e-07!39;CL:0000211!1.75e-07!39;CL:0000333!4.07e-07!10;CL:0000095!4.07e-07!10;CL:0000243!4.07e-07!10;CL:0000123!4.07e-07!10;CL:0000125!4.07e-07!10;CL:0000030!4.07e-07!10;CL:0000339!4.07e-07!10
|ontology_enrichment_celltype_v019_2=CL:0000117,1.63e-21,23;CL:0000337,1.63e-21,23;CL:0002319,4.78e-19,43;CL:0000221,2.22e-18,44;CL:0000133,2.22e-18,44;CL:0000540,9.78e-13,33;CL:0000047,9.78e-13,33;CL:0000031,9.78e-13,33;CL:0000404,9.78e-13,33;CL:0002453,5.59e-10,8;CL:0000393,1.04e-09,39;CL:0000211,1.04e-09,39;CL:0002321,5.02e-08,70;CL:0000128,1.17e-07,6;CL:0000126,1.17e-07,6;CL:0000127,1.17e-07,6;CL:0000333,1.50e-07,10;CL:0000095,1.50e-07,10;CL:0000243,1.50e-07,10;CL:0000123,1.50e-07,10;CL:0000125,1.50e-07,10;CL:0000030,1.50e-07,10;CL:0000339,1.50e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.13e-40!73;UBERON:0005743!1.13e-40!73;UBERON:0000073!4.69e-40!75;UBERON:0001016!4.69e-40!75;UBERON:0001049!1.75e-39!52;UBERON:0005068!1.75e-39!52;UBERON:0006241!1.75e-39!52;UBERON:0007135!1.75e-39!52;UBERON:0000955!2.55e-36!50;UBERON:0006238!2.55e-36!50;UBERON:0002616!2.09e-35!49;UBERON:0000033!1.08e-30!63;UBERON:0002346!6.94e-29!71;UBERON:0003075!6.94e-29!71;UBERON:0007284!6.94e-29!71;UBERON:0004121!1.14e-27!102;UBERON:0000924!1.14e-27!102;UBERON:0006601!1.14e-27!102;UBERON:0003080!1.77e-27!40;UBERON:0002780!1.47e-26!39;UBERON:0001890!1.47e-26!39;UBERON:0006240!1.47e-26!39;UBERON:0003056!1.75e-25!49;UBERON:0002020!2.20e-25!34;UBERON:0002791!2.68e-20!29;UBERON:0003528!2.68e-20!29;UBERON:0001893!2.68e-20!29;UBERON:0007811!8.09e-18!86;UBERON:0000153!1.13e-16!94;UBERON:0000956!2.75e-14!21;UBERON:0001869!2.75e-14!21;UBERON:0000203!2.75e-14!21;UBERON:0002619!2.74e-12!17;UBERON:0003076!5.06e-12!12;UBERON:0003057!5.06e-12!12;UBERON:0000025!7.16e-08!114;UBERON:0002021!1.66e-07!10;UBERON:0000411!1.66e-07!10;UBERON:0001950!1.66e-07!10;UBERON:0002240!2.30e-07!6;UBERON:0005174!2.30e-07!6;UBERON:0001137!2.30e-07!6;UBERON:0002420!3.33e-07!8;UBERON:0007245!3.33e-07!8;UBERON:0010009!3.33e-07!8;UBERON:0010011!3.33e-07!8;UBERON:0000454!3.33e-07!8;UBERON:0001894!4.33e-07!10;UBERON:0006222!4.33e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.17e-49,73;UBERON:0000073,5.82e-48,54;UBERON:0001016,8.10e-48,75;UBERON:0001049,4.63e-46,52;UBERON:0005068,4.63e-46,52;UBERON:0006241,4.63e-46,52;UBERON:0007135,4.63e-46,52;UBERON:0000955,6.33e-39,47;UBERON:0006238,6.33e-39,47;UBERON:0002616,8.30e-38,46;UBERON:0002346,2.45e-34,64;UBERON:0003075,2.45e-34,64;UBERON:0007284,2.45e-34,64;UBERON:0004121,1.04e-33,95;UBERON:0000924,1.04e-33,95;UBERON:0006601,1.04e-33,95;UBERON:0003080,3.64e-31,40;UBERON:0002780,5.01e-30,39;UBERON:0001890,5.01e-30,39;UBERON:0006240,5.01e-30,39;UBERON:0002020,5.31e-30,34;UBERON:0010371,4.16e-28,73;UBERON:0003528,1.17e-23,29;UBERON:0002791,1.17e-23,29;UBERON:0001893,1.17e-23,29;UBERON:0003056,3.62e-23,49;UBERON:0010314,4.79e-19,92;UBERON:0000956,3.77e-16,21;UBERON:0001869,3.77e-16,21;UBERON:0000203,3.77e-16,21;UBERON:0002619,4.53e-15,17;UBERON:0003076,9.83e-15,12;UBERON:0003057,9.83e-15,12;UBERON:0000025,1.79e-12,114;UBERON:0004111,1.03e-10,122;UBERON:0002021,4.73e-09,10;UBERON:0000411,4.73e-09,10;UBERON:0001950,4.73e-09,10;UBERON:0002240,7.10e-09,6;UBERON:0005174,7.10e-09,6;UBERON:0001137,7.10e-09,6;UBERON:0002420,1.13e-08,8;UBERON:0007245,1.13e-08,8;UBERON:0010009,1.13e-08,8;UBERON:0010011,1.13e-08,8;UBERON:0000454,1.13e-08,8;UBERON:0001948,1.26e-07,5;UBERON:0002315,1.26e-07,5;UBERON:0001954,1.84e-07,7;UBERON:0003022,1.84e-07,7;UBERON:0002421,1.84e-07,7;UBERON:0000349,1.84e-07,7;UBERON:0002600,1.84e-07,7;UBERON:0004733,2.05e-07,6;UBERON:0004732,2.05e-07,6;UBERON:0002028,2.05e-07,6;UBERON:0007277,2.05e-07,6;UBERON:0011216,2.52e-07,194;UBERON:0001894,3.51e-07,10;UBERON:0006222,3.51e-07,10
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,7.84890562969608,11.8630538676615,12.0546537426056,13.2987100544094,41.6882436658418,0,0,0,0,0,0,17.3992156339254,14.2827564403449,12.6766280701236,0.677689064138264,0,0,0,0,11.085204089181,32.6585559523321,2.17748185847803,1.75507719831198,0.841299845405528,17.7103610330358,18.1112203580323,2.57230678351403,3.54628242767475,3.67687514644008,5.50579404996943,9.83192503255945,7.0659005297872,11.4741070325269,8.5083508550241,10.4182674111352,6.14202597803038,5.6276261003168,6.26472815884921,19.1508580557884,24.6303007782448,14.1663578827228,0,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.296793474485,15.0801628905688,0,0,0,0,10.6351353977424,5.03250663100489,3.76963056338593,7.64827008846016,5.37002460393694,7.2725815595846,8.59878694259116,0,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0,0.150704817835715,0,0,0.374806898238915,0.258703370739016,0,1.13463648100692,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46753866266731,7.10041825417063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54587772942622,13.5965556446956,0,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,1.8006109403131,0.905510786479282,1.50035924522115,3.19212420556092,4.10248280484762,5.92376474167636,6.39376393140658,0.469343416127421,0,0,0,0,0,0,0,0,24.4761398653873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.22227665555024,3.43737308063638,8.248952752497,3.42541259885321,3.7769694869485,3.37511250115903,1.80128481289688,8.60970577069989,4.65984280576638,18.1627858272309,7.58147259461959,5.12200817262403,1.45864030240976,1.25767897576789,2.02227859295016,1.33348036680969,0.618105171716683,0.64183841918363,1.51618327058278,0.50695859978048,0.565879024158229,1.591905626988,1.02440243847791,1.55075766180156,0.952587382566147,1.15884325944855,0.964546102318525,0.824171801606613,0.883193520806384,0,0.532427418478012,1.66905332963125,1.16277133305863,1.31753132581463,1.52306294205018,0.914639864363863,0.526139422875686,0.814824683075171,0.561142271657738,0.711810108745045,1.57607171800902,1.63692417267876,1.39443157067369,2.12197272079256,2.74791635731741,0.935726433781634,1.07435527024149,1.3390183244819,0.441182838239031,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,7.84890562969608,11.8630538676615,12.0546537426056,13.2987100544094,41.6882436658418,0,0,0,0,0,0,17.3992156339254,14.2827564403449,12.6766280701236,0.677689064138264,0,0,0,0,11.085204089181,32.6585559523321,2.17748185847803,1.75507719831198,0.841299845405528,17.7103610330358,18.1112203580323,2.57230678351403,3.54628242767475,3.67687514644008,5.50579404996943,9.83192503255945,7.0659005297872,11.4741070325269,8.5083508550241,10.4182674111352,6.14202597803038,5.6276261003168,6.26472815884921,19.1508580557884,24.6303007782448,14.1663578827228,0,0.377857800533928,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.296793474485,15.0801628905688,0,0,0,0,10.6351353977424,5.03250663100489,3.76963056338593,7.64827008846016,5.37002460393694,7.2725815595846,8.59878694259116,0,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0,0.150704817835715,0,0,0.374806898238915,0.258703370739016,0,1.13463648100692,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46753866266731,7.10041825417063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54587772942622,13.5965556446956,0,0,0,0,0,0,0,0,0,0,0,8.03303291054518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04263763452273,1.8006109403131,0.905510786479282,1.50035924522115,3.19212420556092,4.10248280484762,5.92376474167636,6.39376393140658,0.469343416127421,0,0,0,0,0,0,0,0,24.4761398653873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.22227665555024,3.43737308063638,8.248952752497,3.42541259885321,3.7769694869485,3.37511250115903,1.80128481289688,8.60970577069989,4.65984280576638,18.1627858272309,7.58147259461959,5.12200817262403,1.45864030240976,1.25767897576789,2.02227859295016,1.33348036680969,0.618105171716683,0.64183841918363,1.51618327058278,0.50695859978048,0.565879024158229,1.591905626988,1.02440243847791,1.55075766180156,0.952587382566147,1.15884325944855,0.964546102318525,0.824171801606613,0.883193520806384,0,0.532427418478012,1.66905332963125,1.16277133305863,1.31753132581463,1.52306294205018,0.914639864363863,0.526139422875686,0.814824683075171,0.561142271657738,0.711810108745045,1.57607171800902,1.63692417267876,1.39443157067369,2.12197272079256,2.74791635731741,0.935726433781634,1.07435527024149,1.3390183244819,0.441182838239031,0.463735671240843
|short_description=p1@Rfx4
|short_description=p1@Rfx4
}}
}}

Latest revision as of 12:12, 26 September 2015

Short description:p1@Rfx4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rfx4_5end
Coexpression cluster:MCL_coexpression_mm9:2593
Association with transcript: 88bp_to_ENSMUST00000060397_5end
EntrezGene:Rfx4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rfx4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.05
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C441.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C317.40
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C811.09
Mouse Microglia, donor2.CNhs12634.11736-123E832.66
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.11
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.51
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.30
cerebellum, neonate N30.CNhs11135.1395-42I215.08
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.64
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F13.77
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F27.27
diencephalon, neonate N30.CNhs11201.1388-42B28.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G17.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.55
medulla oblongata, neonate N30.CNhs11200.1396-42A313.60
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C924.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I818.16
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.17e-4973
regional part of nervous system5.82e-4854
nervous system8.10e-4875
neural tube4.63e-4652
neural rod4.63e-4652
future spinal cord4.63e-4652
neural keel4.63e-4652
brain6.33e-3947
future brain6.33e-3947
regional part of brain8.30e-3846
neurectoderm2.45e-3464
neural plate2.45e-3464
presumptive neural plate2.45e-3464
ectoderm-derived structure1.04e-3395
ectoderm1.04e-3395
presumptive ectoderm1.04e-3395
anterior neural tube3.64e-3140
regional part of forebrain5.01e-3039
forebrain5.01e-3039
future forebrain5.01e-3039
gray matter5.31e-3034
ecto-epithelium4.16e-2873
brain grey matter1.17e-2329
regional part of telencephalon1.17e-2329
telencephalon1.17e-2329
pre-chordal neural plate3.62e-2349
structure with developmental contribution from neural crest4.79e-1992
cerebral cortex3.77e-1621
cerebral hemisphere3.77e-1621
pallium3.77e-1621
regional part of cerebral cortex4.53e-1517
posterior neural tube9.83e-1512
chordal neural plate9.83e-1512
tube1.79e-12114
anatomical conduit1.03e-10122
occipital lobe4.73e-0910
visual cortex4.73e-0910
neocortex4.73e-0910
spinal cord7.10e-096
dorsal region element7.10e-096
dorsum7.10e-096
basal ganglion1.13e-088
nuclear complex of neuraxis1.13e-088
aggregate regional part of brain1.13e-088
collection of basal ganglia1.13e-088
cerebral subcortex1.13e-088
regional part of spinal cord1.26e-075
gray matter of spinal cord1.26e-075
Ammon's horn1.84e-077
lobe parts of cerebral cortex1.84e-077
hippocampal formation1.84e-077
limbic system1.84e-077
limbic lobe1.84e-077
segmental subdivision of hindbrain2.05e-076
segmental subdivision of nervous system2.05e-076
hindbrain2.05e-076
presumptive hindbrain2.05e-076
organ system subdivision2.52e-07194
diencephalon3.51e-0710
future diencephalon3.51e-0710
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