Personal tools

FFCP PHASE1:Mm9::chr15:18748419..18748446,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320873
|EntrezGene=320873
|HGNC=
|HGNC=
|MCL_coexpression_id=1303
|TSSclassifier=NA
|UniProt=P70408
|UniProt=P70408
|association_with_transcript=-255bp_to_ENSMUST00000166873,uc007vii.1,uc007vij.1,uc007vik.1_5end
|association_with_transcript=-255bp_to_ENSMUST00000166873,uc007vii.1,uc007vij.1,uc007vik.1_5end
|cluster_id=chr15:18748419..18748446,+
|description=CAGE_peak_3_at_Cdh10_5end
|description=CAGE_peak_3_at_Cdh10_5end
|id=chr15:18748419..18748446,+
|id=chr15:18748419..18748446,+
|ontology_enrichment_celltype=CL:0000540!4.81e-18!33;CL:0000047!4.81e-18!33;CL:0000031!4.81e-18!33;CL:0000404!4.81e-18!33;CL:0000393!4.29e-15!39;CL:0000211!4.29e-15!39;CL:0000221!4.07e-13!44;CL:0000133!4.07e-13!44;CL:0002319!8.67e-13!43;CL:0000117!9.31e-12!23;CL:0000337!9.31e-12!23;CL:0000055!1.64e-10!50;CL:0000107!3.71e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,4.59e-25,33;CL:0000047,4.59e-25,33;CL:0000031,4.59e-25,33;CL:0000404,4.59e-25,33;CL:0000393,1.46e-19,39;CL:0000211,1.46e-19,39;CL:0000221,2.08e-18,44;CL:0000133,2.08e-18,44;CL:0002319,6.78e-18,43;CL:0000117,2.53e-15,23;CL:0000337,2.53e-15,23;CL:0000107,2.11e-10,9;CL:0002321,1.08e-09,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.13e-32!75;UBERON:0001016!1.13e-32!75;UBERON:0004121!1.62e-32!102;UBERON:0000924!1.62e-32!102;UBERON:0006601!1.62e-32!102;UBERON:0001017!3.81e-32!73;UBERON:0005743!3.81e-32!73;UBERON:0002346!8.71e-28!71;UBERON:0003075!8.71e-28!71;UBERON:0007284!8.71e-28!71;UBERON:0000033!5.09e-25!63;UBERON:0001049!2.08e-23!52;UBERON:0005068!2.08e-23!52;UBERON:0006241!2.08e-23!52;UBERON:0007135!2.08e-23!52;UBERON:0000955!1.50e-22!50;UBERON:0006238!1.50e-22!50;UBERON:0002616!9.05e-22!49;UBERON:0003056!1.75e-21!49;UBERON:0003080!2.66e-19!40;UBERON:0002780!1.15e-18!39;UBERON:0001890!1.15e-18!39;UBERON:0006240!1.15e-18!39;UBERON:0002020!4.92e-17!34;UBERON:0002791!3.62e-14!29;UBERON:0003528!3.62e-14!29;UBERON:0001893!3.62e-14!29;UBERON:0000153!1.40e-12!94;UBERON:0007811!5.50e-12!86;UBERON:0000956!1.95e-10!21;UBERON:0001869!1.95e-10!21;UBERON:0000203!1.95e-10!21;UBERON:0002619!4.73e-09!17;UBERON:0002021!8.75e-09!10;UBERON:0000411!8.75e-09!10;UBERON:0001950!8.75e-09!10;UBERON:0000010!2.59e-07!11;UBERON:0002410!3.71e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.17e-48,73;UBERON:0001016,8.74e-48,75;UBERON:0004121,3.60e-40,95;UBERON:0000924,3.60e-40,95;UBERON:0006601,3.60e-40,95;UBERON:0000073,7.47e-36,54;UBERON:0002346,3.52e-35,64;UBERON:0003075,3.52e-35,64;UBERON:0007284,3.52e-35,64;UBERON:0001049,1.42e-33,52;UBERON:0005068,1.42e-33,52;UBERON:0006241,1.42e-33,52;UBERON:0007135,1.42e-33,52;UBERON:0010371,2.76e-31,73;UBERON:0000955,7.04e-29,47;UBERON:0006238,7.04e-29,47;UBERON:0002616,1.06e-27,46;UBERON:0003080,4.88e-26,40;UBERON:0002780,4.63e-25,39;UBERON:0001890,4.63e-25,39;UBERON:0006240,4.63e-25,39;UBERON:0003056,1.91e-24,49;UBERON:0002020,1.48e-23,34;UBERON:0010314,2.38e-22,92;UBERON:0003528,4.22e-19,29;UBERON:0002791,4.22e-19,29;UBERON:0001893,4.22e-19,29;UBERON:0000956,2.75e-13,21;UBERON:0001869,2.75e-13,21;UBERON:0000203,2.75e-13,21;UBERON:0002021,5.78e-13,10;UBERON:0000411,5.78e-13,10;UBERON:0001950,5.78e-13,10;UBERON:0002619,3.52e-12,17;UBERON:0002410,2.11e-10,9;UBERON:0011216,5.36e-10,194;UBERON:0000010,1.83e-09,11;UBERON:0003076,8.55e-08,12;UBERON:0003057,8.55e-08,12;UBERON:0000025,1.19e-07,114;UBERON:0004111,2.52e-07,122;UBERON:0002420,4.79e-07,8;UBERON:0007245,4.79e-07,8;UBERON:0010009,4.79e-07,8;UBERON:0010011,4.79e-07,8;UBERON:0000454,4.79e-07,8;UBERON:0001894,7.93e-07,10;UBERON:0006222,7.93e-07,10;UBERON:0002240,9.10e-07,6;UBERON:0005174,9.10e-07,6;UBERON:0001137,9.10e-07,6
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,1.61853168687678,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.384218305321555,1.65903379693564,1.21505344498522,0.630974884054146,3.14216082844184,2.65042249141936,1.83736198822431,0.670918297127655,1.83843757322004,6.60695285996332,6.89511625660014,9.06278546211836,1.58263545276233,1.64677758484337,3.12548022334056,2.79182999001381,4.50210088025344,4.88954392885792,6.48182888042069,5.97961059356232,2.23679334990361,0.605809546665472,1.13357340160178,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,1.08245520505607,1.26679932737549,1.01104889002957,0,0.517875767294343,0,1.90833859442749,0.608930956624282,0.461230994512117,0.60289056221049,0.823120949949934,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.75668478206928,1.8850203613211,0,0,0,0,5.69204429738326,4.11750542536764,1.00523481690292,6.77914848749878,6.64860189058859,6.02585329222724,8.4365456795234,0.407357455401265,0.124406970610093,0,0.420883711772948,1.82168620147785,0.689706313300419,2.16074555766419,1.65775299619287,1.02054748726992,0.896796041993948,0.655912071918102,0.517406741478031,0.431135985865684,0.378212160335639,1.58356011747554,0.876782929710299,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0.720248245844059,0,0.196764231747404,0.308534225774757,0,0,0.467061369468678,0,0.164167464079095,0,0,0,0,3.36463917702604,3.49875682089567,0,0,1.06644125267617,1.39342003116263,0.644337306610467,0.605050573870028,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.407302655690628,0.387904974335251,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.509235257325564,0,0.335012514883631,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0.275936746304732,5.9403718295483,5.86058432961016,0,0,4.10160685241134,5.0757036758563,6.67812532971677,7.64700153448166,7.35235624471901,11.3230612315533,6.47697122679831,7.89090816360542,4.34816555741176,9.63963949265421,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,1.70219802876894,1.62054984628179,1.16422815404479,1.28602221018955,2.6601035046341,2.85390108163313,2.46823530903181,0.608929898229199,0,0,0,0.16488625294148,0.484393280087717,0.120625849856312,0.119372344003136,0,0,7.78786268444141,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,1.42351197111511,0.406638934253697,0.216010681643603,0.627264888043406,0.218362563746178,0.134864346384821,0.330613822901344,0,0,0.621339313086926,0,0.448549638131936,0.330916980914195,0,0.258319646955462,0.168956125490778,0.117357238645754,0.5208175393758,0.524296722128554,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,12.9892923801925,11.9684561491866,9.16632821503035,9.6237782112465,5.48066015816514,12.8416962556249,9.45031500324528,10.3573876741571,9.9691329976525,11.39072685854,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.919217542250071,1.11123363900808,1.64828045791115,0.962757628775446,1.26348605881899,2.28131369901216,0.754505365544305,1.31098110457835,1.08842759088278,0.804096565378586,0.952587382566147,1.0429589335037,1.92909220463705,0.412085900803307,0.588795680537589,1.37147700954166,0.70990322463735,1.43061713968393,1.0174249164263,1.31753132581463,0.930760686808441,0.548783918618318,0.789209134313529,0.950628796921032,1.68342681497322,0.711810108745045,0.492522411877817,1.63692417267876,1.54936841185966,0.771626443924566,0.749431733813838,0.935726433781634,0.214871054048298,0.57386499620653,0,0.463735671240843
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,1.61853168687678,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0.384218305321555,1.65903379693564,1.21505344498522,0.630974884054146,3.14216082844184,2.65042249141936,1.83736198822431,0.670918297127655,1.83843757322004,6.60695285996332,6.89511625660014,9.06278546211836,1.58263545276233,1.64677758484337,3.12548022334056,2.79182999001381,4.50210088025344,4.88954392885792,6.48182888042069,5.97961059356232,2.23679334990361,0.605809546665472,1.13357340160178,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.26759077799012,0,0,0,1.08245520505607,1.26679932737549,1.01104889002957,0,0.517875767294343,0,1.90833859442749,0.608930956624282,0.461230994512117,0.60289056221049,0.823120949949934,0.125666591329675,0,0,0,0.161766849947409,0,0,0,1.75668478206928,1.8850203613211,0,0,0,0,5.69204429738326,4.11750542536764,1.00523481690292,6.77914848749878,6.64860189058859,6.02585329222724,8.4365456795234,0.407357455401265,0.124406970610093,0,0.420883711772948,1.82168620147785,0.689706313300419,2.16074555766419,1.65775299619287,1.02054748726992,0.896796041993948,0.655912071918102,0.517406741478031,0.431135985865684,0.378212160335639,1.58356011747554,0.876782929710299,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0,0,0.720248245844059,0,0.196764231747404,0.308534225774757,0,0,0.467061369468678,0,0.164167464079095,0,0,0,0,3.36463917702604,3.49875682089567,0,0,1.06644125267617,1.39342003116263,0.644337306610467,0.605050573870028,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0.569003702859245,0.342745537829186,0,0.407302655690628,0.387904974335251,0,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.509235257325564,0,0.335012514883631,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0.275936746304732,5.9403718295483,5.86058432961016,0,0,4.10160685241134,5.0757036758563,6.67812532971677,7.64700153448166,7.35235624471901,11.3230612315533,6.47697122679831,7.89090816360542,4.34816555741176,9.63963949265421,0.141940085208269,0,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,1.70219802876894,1.62054984628179,1.16422815404479,1.28602221018955,2.6601035046341,2.85390108163313,2.46823530903181,0.608929898229199,0,0,0,0.16488625294148,0.484393280087717,0.120625849856312,0.119372344003136,0,0,7.78786268444141,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,1.42351197111511,0.406638934253697,0.216010681643603,0.627264888043406,0.218362563746178,0.134864346384821,0.330613822901344,0,0,0.621339313086926,0,0.448549638131936,0.330916980914195,0,0.258319646955462,0.168956125490778,0.117357238645754,0.5208175393758,0.524296722128554,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0.36630324853453,0,0,12.9892923801925,11.9684561491866,9.16632821503035,9.6237782112465,5.48066015816514,12.8416962556249,9.45031500324528,10.3573876741571,9.9691329976525,11.39072685854,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.919217542250071,1.11123363900808,1.64828045791115,0.962757628775446,1.26348605881899,2.28131369901216,0.754505365544305,1.31098110457835,1.08842759088278,0.804096565378586,0.952587382566147,1.0429589335037,1.92909220463705,0.412085900803307,0.588795680537589,1.37147700954166,0.70990322463735,1.43061713968393,1.0174249164263,1.31753132581463,0.930760686808441,0.548783918618318,0.789209134313529,0.950628796921032,1.68342681497322,0.711810108745045,0.492522411877817,1.63692417267876,1.54936841185966,0.771626443924566,0.749431733813838,0.935726433781634,0.214871054048298,0.57386499620653,0,0.463735671240843
|short_description=p3@Cdh10
|short_description=p3@Cdh10
}}
}}

Latest revision as of 15:50, 26 September 2015

Short description:p3@Cdh10
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cdh10_5end
Coexpression cluster:MCL_coexpression_mm9:1303
Association with transcript: -255bp_to_ENSMUST00000166873, uc007vii.1, uc007vij.1, uc007vik.1_5end
EntrezGene:Cdh10
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cdh10

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B28.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D77.65
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.32
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.99
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system4.17e-4873
nervous system8.74e-4875
ectoderm-derived structure3.60e-4095
ectoderm3.60e-4095
presumptive ectoderm3.60e-4095
regional part of nervous system7.47e-3654
neurectoderm3.52e-3564
neural plate3.52e-3564
presumptive neural plate3.52e-3564
neural tube1.42e-3352
neural rod1.42e-3352
future spinal cord1.42e-3352
neural keel1.42e-3352
ecto-epithelium2.76e-3173
brain7.04e-2947
future brain7.04e-2947
regional part of brain1.06e-2746
anterior neural tube4.88e-2640
regional part of forebrain4.63e-2539
forebrain4.63e-2539
future forebrain4.63e-2539
pre-chordal neural plate1.91e-2449
gray matter1.48e-2334
structure with developmental contribution from neural crest2.38e-2292
brain grey matter4.22e-1929
regional part of telencephalon4.22e-1929
telencephalon4.22e-1929
cerebral cortex2.75e-1321
cerebral hemisphere2.75e-1321
pallium2.75e-1321
occipital lobe5.78e-1310
visual cortex5.78e-1310
neocortex5.78e-1310
regional part of cerebral cortex3.52e-1217
autonomic nervous system2.11e-109
organ system subdivision5.36e-10194
peripheral nervous system1.83e-0911
posterior neural tube8.55e-0812
chordal neural plate8.55e-0812
tube1.19e-07114
anatomical conduit2.52e-07122
basal ganglion4.79e-078
nuclear complex of neuraxis4.79e-078
aggregate regional part of brain4.79e-078
collection of basal ganglia4.79e-078
cerebral subcortex4.79e-078
diencephalon7.93e-0710
future diencephalon7.93e-0710
spinal cord9.10e-076
dorsal region element9.10e-076
dorsum9.10e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:18748419..18748446,%2B&oldid=4261495"