FFCP PHASE1:Mm9::chr2:53937818..53937829,-: Difference between revisions
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{{FFCP|EntrezGene=67874|HGNC=|UniProt=Q9JJ72|association_with_transcript=133bp_to_ENSMUST00000100089,NM_023396,uc008jrp.1_5end|description=CAGE_peak_3_at_Rprm_5end|id=chr2:53937818..53937829,-|ontology_enrichment_celltype=CL:0000117!4.95e-12!23;CL:0000337!4.95e-12!23;CL:0000540!1.13e-07!33;CL:0000047!1.13e-07!33;CL:0000031!1.13e-07!33;CL:0000404!1.13e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.72e-17,23;CL:0000337,6.72e-17,23;CL:0000540,1.94e-12,33;CL:0000047,1.94e-12,33;CL:0000031,1.94e-12,33;CL:0000404,1.94e-12,33;CL:0000393,6.57e-10,39;CL:0000211,6.57e-10,39;CL:0000221,1.03e-09,44;CL:0000133,1.03e-09,44;CL:0002319,1.26e-08,43;CL:0002613,2.11e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003080!3.07e-18!40;UBERON:0002780!5.48e-18!39;UBERON:0001890!5.48e-18!39;UBERON:0006240!5.48e-18!39;UBERON:0001049!8.05e-18!52;UBERON:0005068!8.05e-18!52;UBERON:0006241!8.05e-18!52;UBERON:0007135!8.05e-18!52;UBERON:0002020!1.34e-16!34;UBERON:0003056!1.62e-16!49;UBERON:0000955!2.82e-15!50;UBERON:0006238!2.82e-15!50;UBERON:0002616!5.52e-15!49;UBERON:0000033!9.79e-15!63;UBERON:0000073!4.23e-14!75;UBERON:0001016!4.23e-14!75;UBERON:0001017!5.70e-14!73;UBERON:0005743!5.70e-14!73;UBERON:0002791!1.42e-13!29;UBERON:0003528!1.42e-13!29;UBERON:0001893!1.42e-13!29;UBERON:0002346!1.77e-12!71;UBERON:0003075!1.77e-12!71;UBERON:0007284!1.77e-12!71;UBERON:0000153!8.27e-10!94;UBERON:0000956!1.08e-09!21;UBERON:0001869!1.08e-09!21;UBERON:0000203!1.08e-09!21;UBERON:0007811!3.75e-09!86;UBERON:0002048!4.68e-09!14;UBERON:0000117!4.68e-09!14;UBERON:0000171!4.68e-09!14;UBERON:0000170!4.68e-09!14;UBERON:0005597!4.68e-09!14;UBERON:0000118!4.68e-09!14;UBERON:0000025!9.79e-09!114;UBERON:0004121!1.02e-08!102;UBERON:0000924!1.02e-08!102;UBERON:0006601!1.02e-08!102;UBERON:0004111!2.88e-08!122;UBERON:0002619!5.15e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.07e-17,34;UBERON:0002780,3.72e-16,39;UBERON:0001890,3.72e-16,39;UBERON:0006240,3.72e-16,39;UBERON:0003080,1.27e-15,40;UBERON:0001049,3.81e-15,52;UBERON:0005068,3.81e-15,52;UBERON:0006241,3.81e-15,52;UBERON:0007135,3.81e-15,52;UBERON:0000073,2.30e-14,54;UBERON:0003528,2.47e-14,29;UBERON:0002791,2.47e-14,29;UBERON:0001893,2.47e-14,29;UBERON:0001017,1.09e-13,73;UBERON:0001016,3.82e-13,75;UBERON:0002616,6.53e-13,46;UBERON:0004111,1.27e-12,122;UBERON:0000955,1.58e-12,47;UBERON:0006238,1.58e-12,47;UBERON:0003056,8.25e-12,49;UBERON:0000025,9.28e-12,114;UBERON:0010371,1.55e-11,73;UBERON:0002346,3.30e-11,64;UBERON:0003075,3.30e-11,64;UBERON:0007284,3.30e-11,64;UBERON:0002048,3.48e-10,14;UBERON:0000117,3.48e-10,14;UBERON:0000171,3.48e-10,14;UBERON:0000170,3.48e-10,14;UBERON:0005597,3.48e-10,14;UBERON:0000118,3.48e-10,14;UBERON:0004121,5.11e-10,95;UBERON:0000924,5.11e-10,95;UBERON:0006601,5.11e-10,95;UBERON:0000956,6.58e-09,21;UBERON:0001869,6.58e-09,21;UBERON:0000203,6.58e-09,21;UBERON:0005153,4.54e-08,17;UBERON:0005178,4.54e-08,17;UBERON:0005181,4.54e-08,17;UBERON:0002224,4.54e-08,17;UBERON:0000915,4.54e-08,17;UBERON:0008947,4.54e-08,17;UBERON:0003258,4.54e-08,17;UBERON:0010314,6.98e-08,92;UBERON:0002420,5.07e-07,8;UBERON:0007245,5.07e-07,8;UBERON:0010009,5.07e-07,8;UBERON:0010011,5.07e-07,8;UBERON:0000454,5.07e-07,8|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,1.26766280701236,0.338844532069132,0,0,0,0,0,0,2.17748185847803,2.8351247049655,3.57552434297349,0.856952953211411,0.441737081903227,1.22490799214954,0.862609239164127,0.919218786610021,0,0.127687338085188,0.153606533256243,3.56092976871523,4.84884511092771,3.12548022334056,0,12.9435400307286,5.65353516774197,1.76777151284201,1.99320353118744,2.79599168737951,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,4.92951969218382,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,1.04294592115366,0,0.20778804455956,0.162241263067758,0.509196819251581,0.124406970610093,2.77995034277042,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.215567992932842,1.32374256117473,1.40760899331159,0.219195732427575,0.278047249225598,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0.330418782983798,0,1.2797295032114,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,2.84501851429623,1.02823661348756,1.1270773567308,0.203651327845314,0.387904974335251,0.701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,2.03228509183265,0.189491411770485,0.325929952884052,0.169745085775188,0.938760993154008,1.84256883185997,4.28478553594825,2.34160377429359,1.89162172927429,1.10732344824387,0.956728611944923,2.62181303545181,2.24490476425664,3.61622646453779,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,1.55230420539305,6.21577401591618,2.48276327099183,1.42695054081656,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.324016022465404,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,4.51801474093653,0.920650473014354,0,1.03111909406213,0.685082519770642,1.5107877947794,1.35004500046361,1.80128481289688,0.453142408984205,2.07104124700728,0.518936737920883,0,0.341467211508268,0.486213434136588,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,1.13175804831646,0.561849044819294,0.576226371643824,0.402048282689293,0.952587382566147,0.231768651889711,0,0.412085900803307,0.883193520806384,0.685738504770831,0,0.476872379894642,0,0.564656282491984,0.338458431566706,1.09756783723664,0.789209134313529,0,0,0.593175090620871,0.394017929502254,1.22769312950907,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,0,0,0|short_description=p3@Rprm}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67874 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9JJ72 | |||
|association_with_transcript=133bp_to_ENSMUST00000100089,NM_023396,uc008jrp.1_5end | |||
|cluster_id=chr2:53937818..53937829,- | |||
|description=CAGE_peak_3_at_Rprm_5end | |||
|id=chr2:53937818..53937829,- | |||
|ontology_enrichment_celltype=CL:0000117!4.95e-12!23;CL:0000337!4.95e-12!23;CL:0000540!1.13e-07!33;CL:0000047!1.13e-07!33;CL:0000031!1.13e-07!33;CL:0000404!1.13e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.72e-17,23;CL:0000337,6.72e-17,23;CL:0000540,1.94e-12,33;CL:0000047,1.94e-12,33;CL:0000031,1.94e-12,33;CL:0000404,1.94e-12,33;CL:0000393,6.57e-10,39;CL:0000211,6.57e-10,39;CL:0000221,1.03e-09,44;CL:0000133,1.03e-09,44;CL:0002319,1.26e-08,43;CL:0002613,2.11e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003080!3.07e-18!40;UBERON:0002780!5.48e-18!39;UBERON:0001890!5.48e-18!39;UBERON:0006240!5.48e-18!39;UBERON:0001049!8.05e-18!52;UBERON:0005068!8.05e-18!52;UBERON:0006241!8.05e-18!52;UBERON:0007135!8.05e-18!52;UBERON:0002020!1.34e-16!34;UBERON:0003056!1.62e-16!49;UBERON:0000955!2.82e-15!50;UBERON:0006238!2.82e-15!50;UBERON:0002616!5.52e-15!49;UBERON:0000033!9.79e-15!63;UBERON:0000073!4.23e-14!75;UBERON:0001016!4.23e-14!75;UBERON:0001017!5.70e-14!73;UBERON:0005743!5.70e-14!73;UBERON:0002791!1.42e-13!29;UBERON:0003528!1.42e-13!29;UBERON:0001893!1.42e-13!29;UBERON:0002346!1.77e-12!71;UBERON:0003075!1.77e-12!71;UBERON:0007284!1.77e-12!71;UBERON:0000153!8.27e-10!94;UBERON:0000956!1.08e-09!21;UBERON:0001869!1.08e-09!21;UBERON:0000203!1.08e-09!21;UBERON:0007811!3.75e-09!86;UBERON:0002048!4.68e-09!14;UBERON:0000117!4.68e-09!14;UBERON:0000171!4.68e-09!14;UBERON:0000170!4.68e-09!14;UBERON:0005597!4.68e-09!14;UBERON:0000118!4.68e-09!14;UBERON:0000025!9.79e-09!114;UBERON:0004121!1.02e-08!102;UBERON:0000924!1.02e-08!102;UBERON:0006601!1.02e-08!102;UBERON:0004111!2.88e-08!122;UBERON:0002619!5.15e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.07e-17,34;UBERON:0002780,3.72e-16,39;UBERON:0001890,3.72e-16,39;UBERON:0006240,3.72e-16,39;UBERON:0003080,1.27e-15,40;UBERON:0001049,3.81e-15,52;UBERON:0005068,3.81e-15,52;UBERON:0006241,3.81e-15,52;UBERON:0007135,3.81e-15,52;UBERON:0000073,2.30e-14,54;UBERON:0003528,2.47e-14,29;UBERON:0002791,2.47e-14,29;UBERON:0001893,2.47e-14,29;UBERON:0001017,1.09e-13,73;UBERON:0001016,3.82e-13,75;UBERON:0002616,6.53e-13,46;UBERON:0004111,1.27e-12,122;UBERON:0000955,1.58e-12,47;UBERON:0006238,1.58e-12,47;UBERON:0003056,8.25e-12,49;UBERON:0000025,9.28e-12,114;UBERON:0010371,1.55e-11,73;UBERON:0002346,3.30e-11,64;UBERON:0003075,3.30e-11,64;UBERON:0007284,3.30e-11,64;UBERON:0002048,3.48e-10,14;UBERON:0000117,3.48e-10,14;UBERON:0000171,3.48e-10,14;UBERON:0000170,3.48e-10,14;UBERON:0005597,3.48e-10,14;UBERON:0000118,3.48e-10,14;UBERON:0004121,5.11e-10,95;UBERON:0000924,5.11e-10,95;UBERON:0006601,5.11e-10,95;UBERON:0000956,6.58e-09,21;UBERON:0001869,6.58e-09,21;UBERON:0000203,6.58e-09,21;UBERON:0005153,4.54e-08,17;UBERON:0005178,4.54e-08,17;UBERON:0005181,4.54e-08,17;UBERON:0002224,4.54e-08,17;UBERON:0000915,4.54e-08,17;UBERON:0008947,4.54e-08,17;UBERON:0003258,4.54e-08,17;UBERON:0010314,6.98e-08,92;UBERON:0002420,5.07e-07,8;UBERON:0007245,5.07e-07,8;UBERON:0010009,5.07e-07,8;UBERON:0010011,5.07e-07,8;UBERON:0000454,5.07e-07,8 | |||
|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,1.26766280701236,0.338844532069132,0,0,0,0,0,0,2.17748185847803,2.8351247049655,3.57552434297349,0.856952953211411,0.441737081903227,1.22490799214954,0.862609239164127,0.919218786610021,0,0.127687338085188,0.153606533256243,3.56092976871523,4.84884511092771,3.12548022334056,0,12.9435400307286,5.65353516774197,1.76777151284201,1.99320353118744,2.79599168737951,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,4.92951969218382,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0.502617408451458,1.04294592115366,0,0.20778804455956,0.162241263067758,0.509196819251581,0.124406970610093,2.77995034277042,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0.215567992932842,1.32374256117473,1.40760899331159,0.219195732427575,0.278047249225598,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0.330418782983798,0,1.2797295032114,0,0,0.201683524623343,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,2.84501851429623,1.02823661348756,1.1270773567308,0.203651327845314,0.387904974335251,0.701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,2.03228509183265,0.189491411770485,0.325929952884052,0.169745085775188,0.938760993154008,1.84256883185997,4.28478553594825,2.34160377429359,1.89162172927429,1.10732344824387,0.956728611944923,2.62181303545181,2.24490476425664,3.61622646453779,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,1.55230420539305,6.21577401591618,2.48276327099183,1.42695054081656,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.324016022465404,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,4.51801474093653,0.920650473014354,0,1.03111909406213,0.685082519770642,1.5107877947794,1.35004500046361,1.80128481289688,0.453142408984205,2.07104124700728,0.518936737920883,0,0.341467211508268,0.486213434136588,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.962757628775446,0.252697211763798,0.50695859978048,1.13175804831646,0.561849044819294,0.576226371643824,0.402048282689293,0.952587382566147,0.231768651889711,0,0.412085900803307,0.883193520806384,0.685738504770831,0,0.476872379894642,0,0.564656282491984,0.338458431566706,1.09756783723664,0.789209134313529,0,0,0.593175090620871,0.394017929502254,1.22769312950907,0.154936841185966,0.192906610981141,0.999242311751784,0.233931608445408,0.429742108096597,0,0,0 | |||
|short_description=p3@Rprm | |||
}} |
Latest revision as of 18:47, 26 September 2015
Short description: | p3@Rprm |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rprm_5end |
Coexpression cluster: | NA |
Association with transcript: | 133bp_to_ENSMUST00000100089, NM_023396, uc008jrp.1_5end |
EntrezGene: | Rprm |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.72e-17 | 23 |
neuroblast (sensu Vertebrata) | 6.72e-17 | 23 |
neuron | 1.94e-12 | 33 |
neuronal stem cell | 1.94e-12 | 33 |
neuroblast | 1.94e-12 | 33 |
electrically signaling cell | 1.94e-12 | 33 |
electrically responsive cell | 6.57e-10 | 39 |
electrically active cell | 6.57e-10 | 39 |
ectodermal cell | 1.03e-09 | 44 |
neurectodermal cell | 1.03e-09 | 44 |
neural cell | 1.26e-08 | 43 |
striatum neuron | 2.11e-07 | 3 |