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FFCP PHASE1:Mm9::chr7:64846563..64846573,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14402
|EntrezGene=14402
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P63080
|UniProt=P63080
|association_with_transcript=20bp_to_NM_008071,uc009hee.1_5end
|association_with_transcript=20bp_to_NM_008071,uc009hee.1_5end
|cluster_id=chr7:64846563..64846573,+
|description=CAGE_peak_3_at_Gabrb3_5end
|description=CAGE_peak_3_at_Gabrb3_5end
|id=chr7:64846563..64846573,+
|id=chr7:64846563..64846573,+
|ontology_enrichment_celltype=CL:0000540!3.71e-17!33;CL:0000047!3.71e-17!33;CL:0000031!3.71e-17!33;CL:0000404!3.71e-17!33;CL:0000117!8.84e-15!23;CL:0000337!8.84e-15!23;CL:0000221!1.20e-13!44;CL:0000133!1.20e-13!44;CL:0002319!2.39e-13!43;CL:0000393!1.71e-12!39;CL:0000211!1.71e-12!39;CL:0000055!1.26e-09!50
|ontology_enrichment_celltype=CL:0000540!3.71e-17!33;CL:0000047!3.71e-17!33;CL:0000031!3.71e-17!33;CL:0000404!3.71e-17!33;CL:0000117!8.84e-15!23;CL:0000337!8.84e-15!23;CL:0000221!1.20e-13!44;CL:0000133!1.20e-13!44;CL:0002319!2.39e-13!43;CL:0000393!1.71e-12!39;CL:0000211!1.71e-12!39;CL:0000055!1.26e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000117,3.93e-16,23;CL:0000337,3.93e-16,23;CL:0000540,4.67e-13,33;CL:0000047,4.67e-13,33;CL:0000031,4.67e-13,33;CL:0000404,4.67e-13,33;CL:0000393,2.24e-10,39;CL:0000211,2.24e-10,39;CL:0002319,5.14e-09,43;CL:0000221,1.02e-08,44;CL:0000133,1.02e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.63e-34!73;UBERON:0005743!1.63e-34!73;UBERON:0000073!4.85e-34!75;UBERON:0001016!4.85e-34!75;UBERON:0001049!7.62e-29!52;UBERON:0005068!7.62e-29!52;UBERON:0006241!7.62e-29!52;UBERON:0007135!7.62e-29!52;UBERON:0002346!7.83e-29!71;UBERON:0003075!7.83e-29!71;UBERON:0007284!7.83e-29!71;UBERON:0004121!1.46e-28!102;UBERON:0000924!1.46e-28!102;UBERON:0006601!1.46e-28!102;UBERON:0000955!4.02e-27!50;UBERON:0006238!4.02e-27!50;UBERON:0000033!2.89e-26!63;UBERON:0002616!3.68e-26!49;UBERON:0002020!1.35e-22!34;UBERON:0003056!3.53e-22!49;UBERON:0003080!4.12e-22!40;UBERON:0002780!2.52e-21!39;UBERON:0001890!2.52e-21!39;UBERON:0006240!2.52e-21!39;UBERON:0002791!7.56e-19!29;UBERON:0003528!7.56e-19!29;UBERON:0001893!7.56e-19!29;UBERON:0007811!8.44e-14!86;UBERON:0000956!1.64e-13!21;UBERON:0001869!1.64e-13!21;UBERON:0000203!1.64e-13!21;UBERON:0000153!2.32e-11!94;UBERON:0002619!2.96e-11!17;UBERON:0002021!2.26e-09!10;UBERON:0000411!2.26e-09!10;UBERON:0001950!2.26e-09!10;UBERON:0003076!3.67e-07!12;UBERON:0003057!3.67e-07!12
|ontology_enrichment_uberon=UBERON:0001017!1.63e-34!73;UBERON:0005743!1.63e-34!73;UBERON:0000073!4.85e-34!75;UBERON:0001016!4.85e-34!75;UBERON:0001049!7.62e-29!52;UBERON:0005068!7.62e-29!52;UBERON:0006241!7.62e-29!52;UBERON:0007135!7.62e-29!52;UBERON:0002346!7.83e-29!71;UBERON:0003075!7.83e-29!71;UBERON:0007284!7.83e-29!71;UBERON:0004121!1.46e-28!102;UBERON:0000924!1.46e-28!102;UBERON:0006601!1.46e-28!102;UBERON:0000955!4.02e-27!50;UBERON:0006238!4.02e-27!50;UBERON:0000033!2.89e-26!63;UBERON:0002616!3.68e-26!49;UBERON:0002020!1.35e-22!34;UBERON:0003056!3.53e-22!49;UBERON:0003080!4.12e-22!40;UBERON:0002780!2.52e-21!39;UBERON:0001890!2.52e-21!39;UBERON:0006240!2.52e-21!39;UBERON:0002791!7.56e-19!29;UBERON:0003528!7.56e-19!29;UBERON:0001893!7.56e-19!29;UBERON:0007811!8.44e-14!86;UBERON:0000956!1.64e-13!21;UBERON:0001869!1.64e-13!21;UBERON:0000203!1.64e-13!21;UBERON:0000153!2.32e-11!94;UBERON:0002619!2.96e-11!17;UBERON:0002021!2.26e-09!10;UBERON:0000411!2.26e-09!10;UBERON:0001950!2.26e-09!10;UBERON:0003076!3.67e-07!12;UBERON:0003057!3.67e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-43,54;UBERON:0001017,6.46e-42,73;UBERON:0001049,1.24e-40,52;UBERON:0005068,1.24e-40,52;UBERON:0006241,1.24e-40,52;UBERON:0007135,1.24e-40,52;UBERON:0001016,1.58e-40,75;UBERON:0002020,1.32e-33,34;UBERON:0000955,4.10e-33,47;UBERON:0006238,4.10e-33,47;UBERON:0002616,2.73e-31,46;UBERON:0002346,2.74e-31,64;UBERON:0003075,2.74e-31,64;UBERON:0007284,2.74e-31,64;UBERON:0004121,7.45e-30,95;UBERON:0000924,7.45e-30,95;UBERON:0006601,7.45e-30,95;UBERON:0003080,1.51e-29,40;UBERON:0002780,5.49e-28,39;UBERON:0001890,5.49e-28,39;UBERON:0006240,5.49e-28,39;UBERON:0010371,2.68e-26,73;UBERON:0003528,9.18e-26,29;UBERON:0002791,9.18e-26,29;UBERON:0001893,9.18e-26,29;UBERON:0003056,9.13e-23,49;UBERON:0002021,3.62e-19,10;UBERON:0000411,3.62e-19,10;UBERON:0001950,3.62e-19,10;UBERON:0010314,5.62e-19,92;UBERON:0000956,1.76e-18,21;UBERON:0001869,1.76e-18,21;UBERON:0000203,1.76e-18,21;UBERON:0002619,7.39e-18,17;UBERON:0000025,1.45e-13,114;UBERON:0004111,4.35e-12,122;UBERON:0003076,5.89e-11,12;UBERON:0003057,5.89e-11,12;UBERON:0002240,9.01e-11,6;UBERON:0005174,9.01e-11,6;UBERON:0001137,9.01e-11,6;UBERON:0011216,2.29e-09,194;UBERON:0001948,2.82e-09,5;UBERON:0002315,2.82e-09,5;UBERON:0002420,2.44e-08,8;UBERON:0007245,2.44e-08,8;UBERON:0010009,2.44e-08,8;UBERON:0010011,2.44e-08,8;UBERON:0000454,2.44e-08,8
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,1.61853168687678,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,1.35005938331691,0.841299845405528,2.28520787523043,1.76694832761291,2.32732518508413,0.766763768145891,0.919218786610021,1.10115880999389,1.78762273319263,1.53606533256243,2.76961204233407,1.64677758484337,0.52091337055676,0.837548997004143,4.50210088025344,3.0559649555362,5.59794312399969,3.41692033917847,2.42319279572891,0,0.453429360640713,0,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0,0.60289056221049,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,3.14560342750128,6.8625090422794,6.28271760564322,6.25767552692195,6.90431734791892,2.0778804455956,4.2182728397617,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0,0.30140963567143,0.612328492361951,0.896796041993948,0.937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,10.3042074796422,5.45394445610208,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,2.81308047821288,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0,0.668396022247182,0.566153061577665,1.61924280669958,1.75353514746787,0.790575555893047,12.5315313404505,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,3.01478397191865,0,1.48094118541909,1.522324745573,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.506868376472335,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,8.471277639256,8.74617949363636,6.87474616127276,7.56154002312225,4.7955776383945,3.7769694869485,10.8003600037089,4.95353323546643,5.43770890781046,1.03552062350364,0.103787347584177,0.399024873401031,0.853668028770671,0,0.419226325255965,1.10306105070008,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.760437899670719,0.377252682772152,0.37456602987953,0.384150914429216,0.689225627467359,2.38146845641537,0.811190281613988,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.752875043322645,0.761531471025089,1.09756783723664,1.05227884575137,0.679020569229309,0.561142271657738,0.593175090620871,0.591026894253381,0.818462086339379,1.23949472948773,0.192906610981141,0.749431733813838,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,1.61853168687678,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,1.35005938331691,0.841299845405528,2.28520787523043,1.76694832761291,2.32732518508413,0.766763768145891,0.919218786610021,1.10115880999389,1.78762273319263,1.53606533256243,2.76961204233407,1.64677758484337,0.52091337055676,0.837548997004143,4.50210088025344,3.0559649555362,5.59794312399969,3.41692033917847,2.42319279572891,0,0.453429360640713,0,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0,0.60289056221049,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,1.67557365450764,0,0,0,0,3.14560342750128,6.8625090422794,6.28271760564322,6.25767552692195,6.90431734791892,2.0778804455956,4.2182728397617,0.101839363850316,0,0,0,0.130120442962704,0.229902104433473,0,0.30140963567143,0.612328492361951,0.896796041993948,0.937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,10.3042074796422,5.45394445610208,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0.203651327845314,0,0,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,2.81308047821288,0,0,0.94652465824877,0.390438744296638,0.215423397732799,0,0.668396022247182,0.566153061577665,1.61924280669958,1.75353514746787,0.790575555893047,12.5315313404505,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,3.01478397191865,0,1.48094118541909,1.522324745573,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.506868376472335,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,8.471277639256,8.74617949363636,6.87474616127276,7.56154002312225,4.7955776383945,3.7769694869485,10.8003600037089,4.95353323546643,5.43770890781046,1.03552062350364,0.103787347584177,0.399024873401031,0.853668028770671,0,0.419226325255965,1.10306105070008,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.760437899670719,0.377252682772152,0.37456602987953,0.384150914429216,0.689225627467359,2.38146845641537,0.811190281613988,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.752875043322645,0.761531471025089,1.09756783723664,1.05227884575137,0.679020569229309,0.561142271657738,0.593175090620871,0.591026894253381,0.818462086339379,1.23949472948773,0.192906610981141,0.749431733813838,0.233931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0
|short_description=p3@Gabrb3
|short_description=p3@Gabrb3
}}
}}

Latest revision as of 23:55, 26 September 2015

Short description:p3@Gabrb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gabrb3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 20bp_to_NM_008071, uc009hee.1_5end
EntrezGene:Gabrb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gabrb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F16.28
cortex, adult.CNhs10473.12-14D56.26
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.93e-1623
neuroblast (sensu Vertebrata)3.93e-1623
neuron4.67e-1333
neuronal stem cell4.67e-1333
neuroblast4.67e-1333
electrically signaling cell4.67e-1333
electrically responsive cell2.24e-1039
electrically active cell2.24e-1039
neural cell5.14e-0943
ectodermal cell1.02e-0844
neurectodermal cell1.02e-0844

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.58e-4354
central nervous system6.46e-4273
neural tube1.24e-4052
neural rod1.24e-4052
future spinal cord1.24e-4052
neural keel1.24e-4052
nervous system1.58e-4075
gray matter1.32e-3334
brain4.10e-3347
future brain4.10e-3347
regional part of brain2.73e-3146
neurectoderm2.74e-3164
neural plate2.74e-3164
presumptive neural plate2.74e-3164
ectoderm-derived structure7.45e-3095
ectoderm7.45e-3095
presumptive ectoderm7.45e-3095
anterior neural tube1.51e-2940
regional part of forebrain5.49e-2839
forebrain5.49e-2839
future forebrain5.49e-2839
ecto-epithelium2.68e-2673
brain grey matter9.18e-2629
regional part of telencephalon9.18e-2629
telencephalon9.18e-2629
pre-chordal neural plate9.13e-2349
occipital lobe3.62e-1910
visual cortex3.62e-1910
neocortex3.62e-1910
structure with developmental contribution from neural crest5.62e-1992
cerebral cortex1.76e-1821
cerebral hemisphere1.76e-1821
pallium1.76e-1821
regional part of cerebral cortex7.39e-1817
tube1.45e-13114
anatomical conduit4.35e-12122
posterior neural tube5.89e-1112
chordal neural plate5.89e-1112
spinal cord9.01e-116
dorsal region element9.01e-116
dorsum9.01e-116
organ system subdivision2.29e-09194
regional part of spinal cord2.82e-095
gray matter of spinal cord2.82e-095
basal ganglion2.44e-088
nuclear complex of neuraxis2.44e-088
aggregate regional part of brain2.44e-088
collection of basal ganglia2.44e-088
cerebral subcortex2.44e-088
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