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FFCP PHASE1:Mm9::chr1:34529626..34529637,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19253
|EntrezGene=19253
|HGNC=
|HGNC=
|MCL_coexpression_id=1877
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=45bp_to_uc007aot.1_5end
|association_with_transcript=45bp_to_uc007aot.1_5end
|cluster_id=chr1:34529626..34529637,+
|description=CAGE_peak_3_at_Ptpn18_5end
|description=CAGE_peak_3_at_Ptpn18_5end
|id=chr1:34529626..34529637,+
|id=chr1:34529626..34529637,+
|ontology_enrichment_celltype=CL:0000988!3.18e-13!32;CL:0002032!3.18e-13!32;CL:0000037!3.18e-13!32;CL:0000566!3.18e-13!32;CL:0000837!3.18e-13!32;CL:0002031!2.94e-09!25;CL:0000738!4.04e-09!17;CL:0002087!4.04e-09!17;CL:0000049!1.45e-07!19;CL:0000838!6.20e-07!12;CL:0000542!6.40e-07!13;CL:0000051!6.40e-07!13;CL:0002320!8.56e-07!46;CL:0000134!8.56e-07!46
|ontology_enrichment_celltype=CL:0000988!3.18e-13!32;CL:0002032!3.18e-13!32;CL:0000037!3.18e-13!32;CL:0000566!3.18e-13!32;CL:0000837!3.18e-13!32;CL:0002031!2.94e-09!25;CL:0000738!4.04e-09!17;CL:0002087!4.04e-09!17;CL:0000049!1.45e-07!19;CL:0000838!6.20e-07!12;CL:0000542!6.40e-07!13;CL:0000051!6.40e-07!13;CL:0002320!8.56e-07!46;CL:0000134!8.56e-07!46
|ontology_enrichment_celltype_v019_2=CL:0000988,9.92e-25,32;CL:0002032,9.92e-25,32;CL:0000037,9.92e-25,32;CL:0000837,9.92e-25,32;CL:0002320,4.22e-19,46;CL:0000134,4.22e-19,46;CL:0002031,2.36e-18,25;CL:0000049,2.73e-15,19;CL:0000219,9.62e-15,54;CL:0000738,2.61e-14,17;CL:0002087,2.61e-14,17;CL:0000763,1.12e-11,16;CL:0000838,1.83e-11,12;CL:0000542,2.51e-10,13;CL:0000051,2.51e-10,13;CL:0000084,2.59e-10,11;CL:0000827,2.59e-10,11;CL:0000557,3.48e-09,7;CL:0000034,2.03e-08,97;CL:0000839,2.54e-08,13;CL:0000791,2.65e-08,9;CL:0000789,2.65e-08,9;CL:0002420,2.65e-08,9;CL:0002419,2.65e-08,9;CL:0000790,2.65e-08,9;CL:0000553,1.14e-07,6;CL:0000556,1.14e-07,6;CL:0000624,1.23e-07,8;CL:0000723,2.62e-07,91;CL:0000048,2.62e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!3.39e-21!48;UBERON:0002390!1.59e-19!45;UBERON:0003061!1.59e-19!45;UBERON:0002405!1.01e-14!70;UBERON:0002371!4.60e-11!16;UBERON:0003081!1.09e-10!88;UBERON:0001474!1.44e-10!22;UBERON:0004765!1.44e-10!22;UBERON:0001434!1.44e-10!22;UBERON:0004177!9.09e-10!29;UBERON:0003408!1.71e-07!24;UBERON:0000926!3.78e-07!193;UBERON:0004120!3.78e-07!193;UBERON:0006603!3.78e-07!193;UBERON:0002370!4.64e-07!23;UBERON:0000974!4.64e-07!23;UBERON:0004807!4.64e-07!23;UBERON:0005058!4.64e-07!23;UBERON:0003351!4.64e-07!23;UBERON:0009113!4.64e-07!23;UBERON:0003295!4.64e-07!23;UBERON:0009722!4.64e-07!23;UBERON:0005562!4.64e-07!23;UBERON:0007690!4.64e-07!23;UBERON:0002384!8.56e-07!46
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.03e-39,48;UBERON:0002405,3.03e-39,48;UBERON:0002390,3.99e-36,45;UBERON:0003061,3.99e-36,45;UBERON:0002384,4.22e-19,46;UBERON:0002371,4.69e-19,16;UBERON:0003081,1.69e-18,87;UBERON:0004177,7.44e-18,29;UBERON:0005057,7.44e-18,29;UBERON:0001474,2.23e-17,22;UBERON:0004765,2.23e-17,22;UBERON:0001434,2.23e-17,22;UBERON:0000926,5.99e-14,120;UBERON:0004120,5.99e-14,120;UBERON:0006603,5.99e-14,120;UBERON:0002204,6.31e-14,32;UBERON:0003408,1.35e-13,24;UBERON:0000077,1.77e-13,35;UBERON:0002370,8.71e-13,23;UBERON:0000974,8.71e-13,23;UBERON:0004807,8.71e-13,23;UBERON:0005058,8.71e-13,23;UBERON:0003351,8.71e-13,23;UBERON:0009113,8.71e-13,23;UBERON:0003295,8.71e-13,23;UBERON:0009722,8.71e-13,23;UBERON:0005562,8.71e-13,23;UBERON:0007690,8.71e-13,23;UBERON:0006562,5.07e-12,24;UBERON:0001557,5.07e-12,24;UBERON:0001042,5.07e-12,24;UBERON:0008814,5.07e-12,24;UBERON:0009145,5.07e-12,24;UBERON:0000072,4.42e-10,27;UBERON:0001004,1.09e-07,42;UBERON:0007811,3.34e-07,36;UBERON:0000065,4.12e-07,41;UBERON:0001041,5.12e-07,80
|phase1_expression=0.160148847104794,0,0,0,0,0,0,7.48915275961142,1.40788722151667,1.17032263160997,1.19852577757853,1.59544317990673,4.96482116800497,5.15780374272085,1.66554880907831,3.64455481301687,2.79824751251259,20.1895785829272,17.1393042007173,18.2487550273153,0.255129870453209,5.56029326724958,4.96279599363977,2.23989391910769,2.2940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,2.09265815368454,5.4693474116666,1.57057123192139,0,0.683045484958446,1.45653105909346,0,0,0,0,0,0,0,0,0,12.080347636157,2.90144856804538,1.68046899571232,0,0,0,0,0,0,0,0,13.9484456178617,16.8107281636386,16.3410426437603,6.5912024314049,6.14749288514487,0.103689612308478,0.270011876663381,0,0,0.220868540951614,0.244981598429908,0.191690942036473,0,1.10115880999389,0,0,0,0.182975287204819,0.52091337055676,0.279182999001381,0.56276261003168,0.763991238884051,0.589257170947335,0.142371680799103,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,6.47344709117929,0.29688427812965,0.867426633830679,1.21786191324856,0.230615497256059,0.452167921657868,0.23517741427141,0.376999773989026,0,1.15679485535929,1.76922110389975,0.647067399789637,1.76673214768315,1.93950101254089,0,0.292780797011547,0.209446706813455,0.510914110417183,17.972268675888,27.5955256256968,16.3920592924253,0,0,0.125654352112864,0.347648640384553,0.511430914660661,0.20778804455956,0,0.611036183101898,1.49288364732112,1.0108910337347,0.420883711772948,0.520481771850815,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,0,0.431135985865684,0.567318240503458,0.527853372491847,1.09597866213787,0.278047249225598,0.348252166522167,0.61734640922383,0.398068533636986,24.5774615559632,14.9261786126535,8.52490498186778,0.207125772535502,0.469052119962192,0.540186184383045,0,0,0.925602677324269,0,0.536546802799238,0,0,0.656669856316381,0.648550476366846,0.438599962275997,0.658650345873152,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0.639864751605702,0.928946687441754,0.128867461322093,0.605050573870028,0.889512175379481,0,0.474529061544512,0,0,0.198956472041151,0.38992817423824,0,0.432276099749388,0.398282546508734,0,0.571242563048644,0,0.407302655690628,0.581857461502877,0.280543279561274,0.126473074248515,0.295220295959204,0.470996183524124,0.123397163921801,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,1.78238096246994,1.72617682470486,1.29708181420028,1.37280706594041,1.43768206527355,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0,1.29327233116623,0,0.814824882210129,0.848725428875941,0,0.167506257441816,0.952174563544055,0.390267295715598,0.630540576424764,0.8858587585951,0.797273843287435,0.983179888294428,1.55416483679306,1.88043776155965,3.01582567878545,3.80733978673097,0,0.827810238914197,0.642202359951168,0.117211686592203,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0,0,0.425820255624806,0.890328018336276,0.325773918707152,2.14461159864296,0,0.485561272309963,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.720244376125241,1.16422815404479,0.643011105094777,0.532020700926821,0.713475270408282,1.31639216481697,0,0,0,0.441056796109924,0.49465875882444,0.161464426695906,0.542816324353403,0.238744688006273,0.328281799490123,0.582961673259701,0.370850604021019,5.12612642393558,2.27025554759545,2.22233432843654,2.63715839806567,2.46049609897845,2.74533807847827,6.96911562974807,5.87796099759364,5.66619892598138,0,1.10717597753397,0,0.108005340821801,0.836353184057875,0.655087691238533,0.674321731924103,0.743881101528023,0.26175594198403,0.90730481304255,2.4853572523477,0,0.448549638131936,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,6.32022241256356,1.82452693761148,0.924398614483445,1.29920822977795,1.43221356533985,1.39076948346885,3.24527713703916,3.69223817936443,3.02899349844443,4.26758117267999,5.04130925684203,4.67797827550812,3.65604998233252,4.20756847853648,0.226730383615211,0,0.179427713218951,0,0.386379188064381,0.563047426353546,1.09890974560359,0.214368379079066,0,1.12950368523413,0,0,0.515559547031063,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.919217542250071,0.44449345560323,0.618105171716683,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.561849044819294,0.256100609619477,0.402048282689293,0,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.177475806159338,0,0.581385666529314,0.282328141245992,0.423073039458382,0.73171189149109,0,0.271608227691724,0.561142271657738,0.474540072496697,0.394017929502254,0.818462086339379,0.464810523557898,0.578719832943424,0.499621155875892,0.467863216890817,0,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|short_description=p3@Ptpn18
|short_description=p3@Ptpn18
}}
}}

Latest revision as of 02:00, 27 September 2015

Short description:p3@Ptpn18
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ptpn18_5end
Coexpression cluster:MCL_coexpression_mm9:1877
Association with transcript: 45bp_to_uc007aot.1_5end
EntrezGene:Ptpn18
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ptpn18

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.60
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.16
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A220.19
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A417.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.08
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E716.81
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D216.34
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.97
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D127.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.39
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C824.58
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.93
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.52
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G25.13
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.67
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D34.27
thymus, neonate N10.CNhs11194.748-24E45.04
thymus, neonate N20.CNhs11186.820-7A24.68
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G24.21
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic cell9.92e-2532
hematopoietic oligopotent progenitor cell9.92e-2532
hematopoietic stem cell9.92e-2532
hematopoietic multipotent progenitor cell9.92e-2532
connective tissue cell4.22e-1946
mesenchymal cell4.22e-1946
hematopoietic lineage restricted progenitor cell2.36e-1825
common myeloid progenitor2.73e-1519
motile cell9.62e-1554
leukocyte2.61e-1417
nongranular leukocyte2.61e-1417
myeloid cell1.12e-1116
lymphoid lineage restricted progenitor cell1.83e-1112
lymphocyte2.51e-1013
common lymphoid progenitor2.51e-1013
T cell2.59e-1011
pro-T cell2.59e-1011
granulocyte monocyte progenitor cell3.48e-097
stem cell2.03e-0897
myeloid lineage restricted progenitor cell2.54e-0813
mature alpha-beta T cell2.65e-089
alpha-beta T cell2.65e-089
immature T cell2.65e-089
mature T cell2.65e-089
immature alpha-beta T cell2.65e-089
megakaryocyte progenitor cell1.14e-076
megakaryocyte1.14e-076
CD4-positive, alpha-beta T cell1.23e-078
somatic stem cell2.62e-0791
multi fate stem cell2.62e-0791

Uber anatomy
Ontology termp-valuen
hemolymphoid system3.03e-3948
immune system3.03e-3948
hematopoietic system3.99e-3645
blood island3.99e-3645
connective tissue4.22e-1946
bone marrow4.69e-1916
lateral plate mesoderm1.69e-1887
hemopoietic organ7.44e-1829
immune organ7.44e-1829
bone element2.23e-1722
skeletal element2.23e-1722
skeletal system2.23e-1722
mesoderm5.99e-14120
mesoderm-derived structure5.99e-14120
presumptive mesoderm5.99e-14120
musculoskeletal system6.31e-1432
gland of gut1.35e-1324
mixed endoderm/mesoderm-derived structure1.77e-1335
thymus8.71e-1323
neck8.71e-1323
respiratory system epithelium8.71e-1323
hemolymphoid system gland8.71e-1323
pharyngeal epithelium8.71e-1323
thymic region8.71e-1323
pharyngeal gland8.71e-1323
entire pharyngeal arch endoderm8.71e-1323
thymus primordium8.71e-1323
early pharyngeal endoderm8.71e-1323
pharynx5.07e-1224
upper respiratory tract5.07e-1224
chordate pharynx5.07e-1224
pharyngeal arch system5.07e-1224
pharyngeal region of foregut5.07e-1224
segment of respiratory tract4.42e-1027
respiratory system1.09e-0742
craniocervical region3.34e-0736
respiratory tract4.12e-0741
foregut5.12e-0780
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