FFCP PHASE1:Mm9::chr5:117864816..117864832,+: Difference between revisions
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{{FFCP|EntrezGene=333050|HGNC=|MCL_coexpression_id=39|UniProt=F8WGG9,Q3UVC0|association_with_transcript=-5bp_to_ENSMUST00000103237,ENSMUST00000111949_5end|description=CAGE_peak_3_at_Ksr2_5end|id=chr5:117864816..117864832,+|ontology_enrichment_celltype=CL:0000117!2.62e-14!23;CL:0000337!2.62e-14!23;CL:0000540!9.88e-12!33;CL:0000047!9.88e-12!33;CL:0000031!9.88e-12!33;CL:0000404!9.88e-12!33;CL:0000393!1.20e-08!39;CL:0000211!1.20e-08!39;CL:0002319!4.00e-07!43;CL:0000221!8.57e-07!44;CL:0000133!8.57e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-08,23;CL:0000337,1.87e-08,23;CL:0002610,7.98e-07,3;CL:0002614,8.37e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.47e-34!71;UBERON:0003075!6.47e-34!71;UBERON:0007284!6.47e-34!71;UBERON:0001049!1.11e-33!52;UBERON:0005068!1.11e-33!52;UBERON:0006241!1.11e-33!52;UBERON:0007135!1.11e-33!52;UBERON:0001017!3.16e-33!73;UBERON:0005743!3.16e-33!73;UBERON:0000955!1.76e-32!50;UBERON:0006238!1.76e-32!50;UBERON:0000073!9.48e-32!75;UBERON:0001016!9.48e-32!75;UBERON:0002616!1.81e-31!49;UBERON:0004121!6.65e-29!102;UBERON:0000924!6.65e-29!102;UBERON:0006601!6.65e-29!102;UBERON:0000033!2.50e-27!63;UBERON:0003080!1.12e-26!40;UBERON:0002780!1.08e-25!39;UBERON:0001890!1.08e-25!39;UBERON:0006240!1.08e-25!39;UBERON:0003056!1.54e-24!49;UBERON:0002020!9.02e-22!34;UBERON:0002791!3.87e-18!29;UBERON:0003528!3.87e-18!29;UBERON:0001893!3.87e-18!29;UBERON:0007811!3.75e-15!86;UBERON:0000153!3.51e-13!94;UBERON:0000956!4.61e-12!21;UBERON:0001869!4.61e-12!21;UBERON:0000203!4.61e-12!21;UBERON:0002021!1.18e-10!10;UBERON:0000411!1.18e-10!10;UBERON:0001950!1.18e-10!10;UBERON:0002619!1.33e-09!17;UBERON:0001894!2.12e-08!10;UBERON:0006222!2.12e-08!10;UBERON:0002420!2.05e-07!8;UBERON:0007245!2.05e-07!8;UBERON:0010009!2.05e-07!8;UBERON:0010011!2.05e-07!8;UBERON:0000454!2.05e-07!8;UBERON:0003076!2.50e-07!12;UBERON:0003057!2.50e-07!12;UBERON:0000025!2.82e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.30e-44,54;UBERON:0001049,2.67e-40,52;UBERON:0005068,2.67e-40,52;UBERON:0006241,2.67e-40,52;UBERON:0007135,2.67e-40,52;UBERON:0000955,8.38e-40,47;UBERON:0006238,8.38e-40,47;UBERON:0002616,6.98e-38,46;UBERON:0001017,1.02e-36,73;UBERON:0001016,1.59e-35,75;UBERON:0003080,4.89e-32,40;UBERON:0002346,2.56e-31,64;UBERON:0003075,2.56e-31,64;UBERON:0007284,2.56e-31,64;UBERON:0002780,3.47e-30,39;UBERON:0001890,3.47e-30,39;UBERON:0006240,3.47e-30,39;UBERON:0010371,1.62e-26,73;UBERON:0004121,2.45e-26,95;UBERON:0000924,2.45e-26,95;UBERON:0006601,2.45e-26,95;UBERON:0003056,5.69e-25,49;UBERON:0002020,7.40e-22,34;UBERON:0003528,2.50e-21,29;UBERON:0002791,2.50e-21,29;UBERON:0001893,2.50e-21,29;UBERON:0010314,6.35e-21,92;UBERON:0002021,4.67e-18,10;UBERON:0000411,4.67e-18,10;UBERON:0001950,4.67e-18,10;UBERON:0002619,1.33e-14,17;UBERON:0000025,3.13e-14,114;UBERON:0004111,7.60e-14,122;UBERON:0000956,1.01e-13,21;UBERON:0001869,1.01e-13,21;UBERON:0000203,1.01e-13,21;UBERON:0001894,1.50e-09,10;UBERON:0006222,1.50e-09,10;UBERON:0011216,1.91e-09,194;UBERON:0002420,5.58e-09,8;UBERON:0007245,5.58e-09,8;UBERON:0010009,5.58e-09,8;UBERON:0010011,5.58e-09,8;UBERON:0000454,5.58e-09,8;UBERON:0002950,8.59e-09,4;UBERON:0001891,8.59e-09,4;UBERON:0009616,8.59e-09,4;UBERON:0010286,8.59e-09,4;UBERON:0003076,2.40e-08,12;UBERON:0003057,2.40e-08,12;UBERON:0004684,7.98e-07,3;UBERON:0002275,7.98e-07,3;UBERON:0002038,8.37e-07,3;UBERON:0009663,8.37e-07,3;UBERON:0009661,8.37e-07,3;UBERON:0000125,8.37e-07,3;UBERON:0002308,8.37e-07,3;UBERON:0007023,8.97e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0.420649922702764,0.856952953211411,1.32521124570968,0.244981598429908,0.191690942036473,0,1.10115880999389,1.91531007127782,3.84016333140609,1.31886287730194,0.548925861614458,1.56274011167028,1.3959149950069,2.25105044012672,2.29197371665215,0.883885756421003,2.27794689278565,0.559198337475902,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,1.63286352971307,0.173485326766136,0.304465478312141,0,0.60289056221049,0.940709657085638,0.376999773989026,0,0,0,0,0,0,0,11.7112318804619,11.1006754611131,0,0,0,0,3.59497534571574,6.8625090422794,0.502617408451458,4.69325664519146,4.09144731728529,2.28566849015516,3.89379031362618,0,0,0,0,0,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99550902271842,1.3377599609307,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,2.81308047821288,0,0,0,0,0.646270193198397,0,0.222798674082394,0,0,0.292255857911312,0.790575555893047,3.53453448063988,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,6.80879211507576,0.18006109403131,0.517434735131018,0.428674070063185,1.77340233642274,1.24858172321449,1.31639216481697,1.8267896946876,0,0,0,0,0,0.0603129249281559,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54551675225752,0,0.183151624267265,0,0,3.3885110557024,0.920650473014354,4.01026859407578,2.749650917499,4.11049511862385,9.82012066606611,5.40018000185445,5.85417564191487,3.62513927187364,2.5888015587591,0,0,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0,0.0574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0,0.290692833264657,0.564656282491984,0.0846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0,0.474540072496697,0.0985044823755635,0,0.154936841185966,0.385813221962283,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p3@Ksr2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=333050 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|TSSclassifier=NA | |||
|UniProt=F8WGG9,Q3UVC0 | |||
|association_with_transcript=-5bp_to_ENSMUST00000103237,ENSMUST00000111949_5end | |||
|cluster_id=chr5:117864816..117864832,+ | |||
|description=CAGE_peak_3_at_Ksr2_5end | |||
|id=chr5:117864816..117864832,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.62e-14!23;CL:0000337!2.62e-14!23;CL:0000540!9.88e-12!33;CL:0000047!9.88e-12!33;CL:0000031!9.88e-12!33;CL:0000404!9.88e-12!33;CL:0000393!1.20e-08!39;CL:0000211!1.20e-08!39;CL:0002319!4.00e-07!43;CL:0000221!8.57e-07!44;CL:0000133!8.57e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.87e-08,23;CL:0000337,1.87e-08,23;CL:0002610,7.98e-07,3;CL:0002614,8.37e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.47e-34!71;UBERON:0003075!6.47e-34!71;UBERON:0007284!6.47e-34!71;UBERON:0001049!1.11e-33!52;UBERON:0005068!1.11e-33!52;UBERON:0006241!1.11e-33!52;UBERON:0007135!1.11e-33!52;UBERON:0001017!3.16e-33!73;UBERON:0005743!3.16e-33!73;UBERON:0000955!1.76e-32!50;UBERON:0006238!1.76e-32!50;UBERON:0000073!9.48e-32!75;UBERON:0001016!9.48e-32!75;UBERON:0002616!1.81e-31!49;UBERON:0004121!6.65e-29!102;UBERON:0000924!6.65e-29!102;UBERON:0006601!6.65e-29!102;UBERON:0000033!2.50e-27!63;UBERON:0003080!1.12e-26!40;UBERON:0002780!1.08e-25!39;UBERON:0001890!1.08e-25!39;UBERON:0006240!1.08e-25!39;UBERON:0003056!1.54e-24!49;UBERON:0002020!9.02e-22!34;UBERON:0002791!3.87e-18!29;UBERON:0003528!3.87e-18!29;UBERON:0001893!3.87e-18!29;UBERON:0007811!3.75e-15!86;UBERON:0000153!3.51e-13!94;UBERON:0000956!4.61e-12!21;UBERON:0001869!4.61e-12!21;UBERON:0000203!4.61e-12!21;UBERON:0002021!1.18e-10!10;UBERON:0000411!1.18e-10!10;UBERON:0001950!1.18e-10!10;UBERON:0002619!1.33e-09!17;UBERON:0001894!2.12e-08!10;UBERON:0006222!2.12e-08!10;UBERON:0002420!2.05e-07!8;UBERON:0007245!2.05e-07!8;UBERON:0010009!2.05e-07!8;UBERON:0010011!2.05e-07!8;UBERON:0000454!2.05e-07!8;UBERON:0003076!2.50e-07!12;UBERON:0003057!2.50e-07!12;UBERON:0000025!2.82e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.30e-44,54;UBERON:0001049,2.67e-40,52;UBERON:0005068,2.67e-40,52;UBERON:0006241,2.67e-40,52;UBERON:0007135,2.67e-40,52;UBERON:0000955,8.38e-40,47;UBERON:0006238,8.38e-40,47;UBERON:0002616,6.98e-38,46;UBERON:0001017,1.02e-36,73;UBERON:0001016,1.59e-35,75;UBERON:0003080,4.89e-32,40;UBERON:0002346,2.56e-31,64;UBERON:0003075,2.56e-31,64;UBERON:0007284,2.56e-31,64;UBERON:0002780,3.47e-30,39;UBERON:0001890,3.47e-30,39;UBERON:0006240,3.47e-30,39;UBERON:0010371,1.62e-26,73;UBERON:0004121,2.45e-26,95;UBERON:0000924,2.45e-26,95;UBERON:0006601,2.45e-26,95;UBERON:0003056,5.69e-25,49;UBERON:0002020,7.40e-22,34;UBERON:0003528,2.50e-21,29;UBERON:0002791,2.50e-21,29;UBERON:0001893,2.50e-21,29;UBERON:0010314,6.35e-21,92;UBERON:0002021,4.67e-18,10;UBERON:0000411,4.67e-18,10;UBERON:0001950,4.67e-18,10;UBERON:0002619,1.33e-14,17;UBERON:0000025,3.13e-14,114;UBERON:0004111,7.60e-14,122;UBERON:0000956,1.01e-13,21;UBERON:0001869,1.01e-13,21;UBERON:0000203,1.01e-13,21;UBERON:0001894,1.50e-09,10;UBERON:0006222,1.50e-09,10;UBERON:0011216,1.91e-09,194;UBERON:0002420,5.58e-09,8;UBERON:0007245,5.58e-09,8;UBERON:0010009,5.58e-09,8;UBERON:0010011,5.58e-09,8;UBERON:0000454,5.58e-09,8;UBERON:0002950,8.59e-09,4;UBERON:0001891,8.59e-09,4;UBERON:0009616,8.59e-09,4;UBERON:0010286,8.59e-09,4;UBERON:0003076,2.40e-08,12;UBERON:0003057,2.40e-08,12;UBERON:0004684,7.98e-07,3;UBERON:0002275,7.98e-07,3;UBERON:0002038,8.37e-07,3;UBERON:0009663,8.37e-07,3;UBERON:0009661,8.37e-07,3;UBERON:0000125,8.37e-07,3;UBERON:0002308,8.37e-07,3;UBERON:0007023,8.97e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.675029691658453,0.420649922702764,0.856952953211411,1.32521124570968,0.244981598429908,0.191690942036473,0,1.10115880999389,1.91531007127782,3.84016333140609,1.31886287730194,0.548925861614458,1.56274011167028,1.3959149950069,2.25105044012672,2.29197371665215,0.883885756421003,2.27794689278565,0.559198337475902,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,1.63286352971307,0.173485326766136,0.304465478312141,0,0.60289056221049,0.940709657085638,0.376999773989026,0,0,0,0,0,0,0,11.7112318804619,11.1006754611131,0,0,0,0,3.59497534571574,6.8625090422794,0.502617408451458,4.69325664519146,4.09144731728529,2.28566849015516,3.89379031362618,0,0,0,0,0,0,0,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99550902271842,1.3377599609307,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,2.81308047821288,0,0,0,0,0.646270193198397,0,0.222798674082394,0,0,0.292255857911312,0.790575555893047,3.53453448063988,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,6.80879211507576,0.18006109403131,0.517434735131018,0.428674070063185,1.77340233642274,1.24858172321449,1.31639216481697,1.8267896946876,0,0,0,0,0,0.0603129249281559,0,0,0,2.59595422814714,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54551675225752,0,0.183151624267265,0,0,3.3885110557024,0.920650473014354,4.01026859407578,2.749650917499,4.11049511862385,9.82012066606611,5.40018000185445,5.85417564191487,3.62513927187364,2.5888015587591,0,0,0.170733605754134,0.243106717068294,0,0,0.44449345560323,0,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0,0.0574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.588795680537589,0.342869252385415,0.177475806159338,0,0.290692833264657,0.564656282491984,0.0846146078916765,0.365855945745545,0.263069711437843,0.407412341537585,0,0.474540072496697,0.0985044823755635,0,0.154936841185966,0.385813221962283,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p3@Ksr2 | |||
}} |
Latest revision as of 18:17, 1 October 2015
Short description: | p3@Ksr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ksr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -5bp_to_ENSMUST00000103237, ENSMUST00000111949_5end |
EntrezGene: | Ksr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.87e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.87e-08 | 23 |
raphe nuclei neuron | 7.98e-07 | 3 |
neuron of the substantia nigra | 8.37e-07 | 3 |