FFCP PHASE1:Mm9::chrX:161765308..161765353,-: Difference between revisions
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{{FFCP|EntrezGene=237213|HGNC=|MCL_coexpression_id=87|UniProt=Q7TNC8|association_with_transcript=0bp_to_ENSMUST00000058787_5end|description=CAGE_peak_1_at_Glra2_5end|id=chrX:161765308..161765353,-|ontology_enrichment_celltype=CL:0000117!3.40e-19!23;CL:0000337!3.40e-19!23;CL:0000540!5.21e-15!33;CL:0000047!5.21e-15!33;CL:0000031!5.21e-15!33;CL:0000404!5.21e-15!33;CL:0000393!4.44e-11!39;CL:0000211!4.44e-11!39;CL:0000221!6.99e-10!44;CL:0000133!6.99e-10!44;CL:0002319!1.01e-09!43;CL:0000055!4.90e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.63e-22,23;CL:0000337,1.63e-22,23;CL:0000540,4.12e-13,33;CL:0000047,4.12e-13,33;CL:0000031,4.12e-13,33;CL:0000404,4.12e-13,33;CL:0000393,6.93e-10,39;CL:0000211,6.93e-10,39;CL:0002319,2.82e-08,43;CL:0000221,6.34e-08,44;CL:0000133,6.34e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.11e-27!52;UBERON:0005068!2.11e-27!52;UBERON:0006241!2.11e-27!52;UBERON:0007135!2.11e-27!52;UBERON:0001017!2.25e-27!73;UBERON:0005743!2.25e-27!73;UBERON:0002346!2.91e-27!71;UBERON:0003075!2.91e-27!71;UBERON:0007284!2.91e-27!71;UBERON:0000033!4.47e-27!63;UBERON:0000073!7.14e-27!75;UBERON:0001016!7.14e-27!75;UBERON:0003056!1.17e-25!49;UBERON:0000955!8.57e-25!50;UBERON:0006238!8.57e-25!50;UBERON:0002616!2.32e-24!49;UBERON:0004121!6.20e-24!102;UBERON:0000924!6.20e-24!102;UBERON:0006601!6.20e-24!102;UBERON:0002020!1.40e-22!34;UBERON:0003080!2.43e-21!40;UBERON:0002780!1.94e-20!39;UBERON:0001890!1.94e-20!39;UBERON:0006240!1.94e-20!39;UBERON:0002791!1.15e-17!29;UBERON:0003528!1.15e-17!29;UBERON:0001893!1.15e-17!29;UBERON:0007811!1.53e-14!86;UBERON:0000153!7.45e-13!94;UBERON:0000956!1.99e-11!21;UBERON:0001869!1.99e-11!21;UBERON:0000203!1.99e-11!21;UBERON:0002619!3.23e-09!17;UBERON:0002021!1.00e-07!10;UBERON:0000411!1.00e-07!10;UBERON:0001950!1.00e-07!10;UBERON:0002420!1.17e-07!8;UBERON:0007245!1.17e-07!8;UBERON:0010009!1.17e-07!8;UBERON:0010011!1.17e-07!8;UBERON:0000454!1.17e-07!8;UBERON:0002240!8.00e-07!6;UBERON:0005174!8.00e-07!6;UBERON:0001137!8.00e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.91e-33,54;UBERON:0002346,2.20e-31,64;UBERON:0003075,2.20e-31,64;UBERON:0007284,2.20e-31,64;UBERON:0001049,1.10e-30,52;UBERON:0005068,1.10e-30,52;UBERON:0006241,1.10e-30,52;UBERON:0007135,1.10e-30,52;UBERON:0001017,7.92e-27,73;UBERON:0002020,8.01e-27,34;UBERON:0003056,4.23e-26,49;UBERON:0001016,1.22e-25,75;UBERON:0010371,2.38e-25,73;UBERON:0000955,1.15e-24,47;UBERON:0006238,1.15e-24,47;UBERON:0002616,3.65e-24,46;UBERON:0004121,1.40e-23,95;UBERON:0000924,1.40e-23,95;UBERON:0006601,1.40e-23,95;UBERON:0003080,2.91e-23,40;UBERON:0002780,3.26e-22,39;UBERON:0001890,3.26e-22,39;UBERON:0006240,3.26e-22,39;UBERON:0003528,5.84e-21,29;UBERON:0002791,5.84e-21,29;UBERON:0001893,5.84e-21,29;UBERON:0010314,1.26e-16,92;UBERON:0000956,1.59e-13,21;UBERON:0001869,1.59e-13,21;UBERON:0000203,1.59e-13,21;UBERON:0002619,6.80e-11,17;UBERON:0002021,6.90e-09,10;UBERON:0000411,6.90e-09,10;UBERON:0001950,6.90e-09,10;UBERON:0002420,8.30e-09,8;UBERON:0007245,8.30e-09,8;UBERON:0010009,8.30e-09,8;UBERON:0010011,8.30e-09,8;UBERON:0000454,8.30e-09,8;UBERON:0002240,8.11e-08,6;UBERON:0005174,8.11e-08,6;UBERON:0001137,8.11e-08,6;UBERON:0003076,9.33e-08,12;UBERON:0003057,9.33e-08,12;UBERON:0001948,3.06e-07,5;UBERON:0002315,3.06e-07,5;UBERON:0000369,7.36e-07,5;UBERON:0002435,7.36e-07,5;UBERON:0000204,7.36e-07,5;UBERON:0010082,7.36e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7343547298567,22.7466121086974,12.0427966666174,0,0,0,0,0,0,0,9.33206510776299,7.42532660824299,7.99234853135252,22.5664277679005,32.2468069789356,17.8836566853833,9.87208351487835,18.3843757322004,18.7196997698961,12.3856717942632,15.0534402591119,20.44237459818,28.5441448039518,30.7338888628488,6.70039197603314,13.5063026407603,11.0014738399303,60.1042314366282,77.5925660355111,44.7358669980721,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,3.77004072264219,0,0,0,0,21.7196427136993,16.0125210986519,29.2774640422974,12.1677024134594,10.7400492078739,23.6878370797899,18.4955039897244,0,0,0,2.52530227063769,0.260240885925407,0.459804208866946,1.62055916824814,3.16480117455002,7.48401490664606,17.039124797885,14.7111707558774,10.6068382002996,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09840850835969,24.6971069710283,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.36239542906,12.0728037189969,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,5.78378369559253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5109901438447,0.18006109403131,0.258717367565509,0,3.54680467284547,1.42695054081656,1.48094118541909,1.2178597964584,0,0,0,0,0,0,0,0,0,8.90041449650446,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.87345025498471,0.539457385539283,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,22.5559365888517,17.1868654031819,18.3882905107746,10.2762377965596,8.3093328712867,7.42524750254986,7.65546045481175,15.8599843144472,5.1776031175182,0.518936737920883,5.1873233542134,5.29274177837816,7.53630822911712,8.38452650511929,5.1476182366004,11.1123363900808,10.3017528619447,6.73930340142812,9.8551912587881,7.09742039692671,11.6948331659367,8.70866019469906,10.2440243847791,9.36198143976496,7.62069906052918,8.11190281613988,6.94473193669338,9.06588981767275,12.0703114510206,11.3146853287187,8.69631450180754,8.58370283810355,10.174249164263,9.97559432402504,7.78454392603424,8.78054269789308,6.83981249738391,11.1359373353607,6.73370725989286,7.23673610557462,7.58484514291839,5.32000356120596,7.90177890048427,5.01557188550968,11.2414760072076,7.01794825336225,5.58664740525576,5.35607329792761,0.220591419119515,0.231867835620421|short_description=p1@Glra2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=237213 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TNC8 | |||
|association_with_transcript=0bp_to_ENSMUST00000058787_5end | |||
|cluster_id=chrX:161765308..161765353,- | |||
|description=CAGE_peak_1_at_Glra2_5end | |||
|id=chrX:161765308..161765353,- | |||
|ontology_enrichment_celltype=CL:0000117!3.40e-19!23;CL:0000337!3.40e-19!23;CL:0000540!5.21e-15!33;CL:0000047!5.21e-15!33;CL:0000031!5.21e-15!33;CL:0000404!5.21e-15!33;CL:0000393!4.44e-11!39;CL:0000211!4.44e-11!39;CL:0000221!6.99e-10!44;CL:0000133!6.99e-10!44;CL:0002319!1.01e-09!43;CL:0000055!4.90e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.63e-22,23;CL:0000337,1.63e-22,23;CL:0000540,4.12e-13,33;CL:0000047,4.12e-13,33;CL:0000031,4.12e-13,33;CL:0000404,4.12e-13,33;CL:0000393,6.93e-10,39;CL:0000211,6.93e-10,39;CL:0002319,2.82e-08,43;CL:0000221,6.34e-08,44;CL:0000133,6.34e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.11e-27!52;UBERON:0005068!2.11e-27!52;UBERON:0006241!2.11e-27!52;UBERON:0007135!2.11e-27!52;UBERON:0001017!2.25e-27!73;UBERON:0005743!2.25e-27!73;UBERON:0002346!2.91e-27!71;UBERON:0003075!2.91e-27!71;UBERON:0007284!2.91e-27!71;UBERON:0000033!4.47e-27!63;UBERON:0000073!7.14e-27!75;UBERON:0001016!7.14e-27!75;UBERON:0003056!1.17e-25!49;UBERON:0000955!8.57e-25!50;UBERON:0006238!8.57e-25!50;UBERON:0002616!2.32e-24!49;UBERON:0004121!6.20e-24!102;UBERON:0000924!6.20e-24!102;UBERON:0006601!6.20e-24!102;UBERON:0002020!1.40e-22!34;UBERON:0003080!2.43e-21!40;UBERON:0002780!1.94e-20!39;UBERON:0001890!1.94e-20!39;UBERON:0006240!1.94e-20!39;UBERON:0002791!1.15e-17!29;UBERON:0003528!1.15e-17!29;UBERON:0001893!1.15e-17!29;UBERON:0007811!1.53e-14!86;UBERON:0000153!7.45e-13!94;UBERON:0000956!1.99e-11!21;UBERON:0001869!1.99e-11!21;UBERON:0000203!1.99e-11!21;UBERON:0002619!3.23e-09!17;UBERON:0002021!1.00e-07!10;UBERON:0000411!1.00e-07!10;UBERON:0001950!1.00e-07!10;UBERON:0002420!1.17e-07!8;UBERON:0007245!1.17e-07!8;UBERON:0010009!1.17e-07!8;UBERON:0010011!1.17e-07!8;UBERON:0000454!1.17e-07!8;UBERON:0002240!8.00e-07!6;UBERON:0005174!8.00e-07!6;UBERON:0001137!8.00e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.91e-33,54;UBERON:0002346,2.20e-31,64;UBERON:0003075,2.20e-31,64;UBERON:0007284,2.20e-31,64;UBERON:0001049,1.10e-30,52;UBERON:0005068,1.10e-30,52;UBERON:0006241,1.10e-30,52;UBERON:0007135,1.10e-30,52;UBERON:0001017,7.92e-27,73;UBERON:0002020,8.01e-27,34;UBERON:0003056,4.23e-26,49;UBERON:0001016,1.22e-25,75;UBERON:0010371,2.38e-25,73;UBERON:0000955,1.15e-24,47;UBERON:0006238,1.15e-24,47;UBERON:0002616,3.65e-24,46;UBERON:0004121,1.40e-23,95;UBERON:0000924,1.40e-23,95;UBERON:0006601,1.40e-23,95;UBERON:0003080,2.91e-23,40;UBERON:0002780,3.26e-22,39;UBERON:0001890,3.26e-22,39;UBERON:0006240,3.26e-22,39;UBERON:0003528,5.84e-21,29;UBERON:0002791,5.84e-21,29;UBERON:0001893,5.84e-21,29;UBERON:0010314,1.26e-16,92;UBERON:0000956,1.59e-13,21;UBERON:0001869,1.59e-13,21;UBERON:0000203,1.59e-13,21;UBERON:0002619,6.80e-11,17;UBERON:0002021,6.90e-09,10;UBERON:0000411,6.90e-09,10;UBERON:0001950,6.90e-09,10;UBERON:0002420,8.30e-09,8;UBERON:0007245,8.30e-09,8;UBERON:0010009,8.30e-09,8;UBERON:0010011,8.30e-09,8;UBERON:0000454,8.30e-09,8;UBERON:0002240,8.11e-08,6;UBERON:0005174,8.11e-08,6;UBERON:0001137,8.11e-08,6;UBERON:0003076,9.33e-08,12;UBERON:0003057,9.33e-08,12;UBERON:0001948,3.06e-07,5;UBERON:0002315,3.06e-07,5;UBERON:0000369,7.36e-07,5;UBERON:0002435,7.36e-07,5;UBERON:0000204,7.36e-07,5;UBERON:0010082,7.36e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7343547298567,22.7466121086974,12.0427966666174,0,0,0,0,0,0,0,9.33206510776299,7.42532660824299,7.99234853135252,22.5664277679005,32.2468069789356,17.8836566853833,9.87208351487835,18.3843757322004,18.7196997698961,12.3856717942632,15.0534402591119,20.44237459818,28.5441448039518,30.7338888628488,6.70039197603314,13.5063026407603,11.0014738399303,60.1042314366282,77.5925660355111,44.7358669980721,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,3.77004072264219,0,0,0,0,21.7196427136993,16.0125210986519,29.2774640422974,12.1677024134594,10.7400492078739,23.6878370797899,18.4955039897244,0,0,0,2.52530227063769,0.260240885925407,0.459804208866946,1.62055916824814,3.16480117455002,7.48401490664606,17.039124797885,14.7111707558774,10.6068382002996,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.09840850835969,24.6971069710283,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.36239542906,12.0728037189969,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,5.78378369559253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5109901438447,0.18006109403131,0.258717367565509,0,3.54680467284547,1.42695054081656,1.48094118541909,1.2178597964584,0,0,0,0,0,0,0,0,0,8.90041449650446,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.87345025498471,0.539457385539283,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6835479080437,22.5559365888517,17.1868654031819,18.3882905107746,10.2762377965596,8.3093328712867,7.42524750254986,7.65546045481175,15.8599843144472,5.1776031175182,0.518936737920883,5.1873233542134,5.29274177837816,7.53630822911712,8.38452650511929,5.1476182366004,11.1123363900808,10.3017528619447,6.73930340142812,9.8551912587881,7.09742039692671,11.6948331659367,8.70866019469906,10.2440243847791,9.36198143976496,7.62069906052918,8.11190281613988,6.94473193669338,9.06588981767275,12.0703114510206,11.3146853287187,8.69631450180754,8.58370283810355,10.174249164263,9.97559432402504,7.78454392603424,8.78054269789308,6.83981249738391,11.1359373353607,6.73370725989286,7.23673610557462,7.58484514291839,5.32000356120596,7.90177890048427,5.01557188550968,11.2414760072076,7.01794825336225,5.58664740525576,5.35607329792761,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Glra2 | |||
}} |
Latest revision as of 18:25, 1 October 2015
Short description: | p1@Glra2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Glra2_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 0bp_to_ENSMUST00000058787_5end |
EntrezGene: | Glra2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.63e-22 | 23 |
neuroblast (sensu Vertebrata) | 1.63e-22 | 23 |
neuron | 4.12e-13 | 33 |
neuronal stem cell | 4.12e-13 | 33 |
neuroblast | 4.12e-13 | 33 |
electrically signaling cell | 4.12e-13 | 33 |
electrically responsive cell | 6.93e-10 | 39 |
electrically active cell | 6.93e-10 | 39 |
neural cell | 2.82e-08 | 43 |
ectodermal cell | 6.34e-08 | 44 |
neurectodermal cell | 6.34e-08 | 44 |