FFCP PHASE1:Mm9::chr16:29541627..29541644,-: Difference between revisions
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{{FFCP|EntrezGene=224079|HGNC=|MCL_coexpression_id=20|UniProt=E9QPP7,Q5XF90|association_with_transcript=-58bp_to_ENSMUST00000057018,NM_001164612,NM_172613,uc007ywa.2,uc012aec.1_5end|description=CAGE_peak_3_at_Atp13a4_5end|id=chr16:29541627..29541644,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-11,23;CL:0000337,1.51e-11,23;CL:0002614,2.87e-10,3;CL:0002610,4.11e-10,3;CL:0000540,1.61e-07,33;CL:0000047,1.61e-07,33;CL:0000031,1.61e-07,33;CL:0000404,1.61e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.30e-16!63;UBERON:0004121!4.54e-16!102;UBERON:0000924!4.54e-16!102;UBERON:0006601!4.54e-16!102;UBERON:0001049!2.67e-15!52;UBERON:0005068!2.67e-15!52;UBERON:0006241!2.67e-15!52;UBERON:0007135!2.67e-15!52;UBERON:0000955!6.88e-15!50;UBERON:0006238!6.88e-15!50;UBERON:0002616!4.06e-14!49;UBERON:0002346!1.03e-12!71;UBERON:0003075!1.03e-12!71;UBERON:0007284!1.03e-12!71;UBERON:0002020!2.31e-12!34;UBERON:0001017!4.24e-12!73;UBERON:0005743!4.24e-12!73;UBERON:0000073!1.68e-11!75;UBERON:0001016!1.68e-11!75;UBERON:0003056!6.23e-10!49;UBERON:0002791!1.95e-09!29;UBERON:0003528!1.95e-09!29;UBERON:0001893!1.95e-09!29;UBERON:0007811!2.53e-09!86;UBERON:0002298!3.15e-09!6;UBERON:0003080!1.02e-08!40;UBERON:0003076!1.56e-08!12;UBERON:0003057!1.56e-08!12;UBERON:0000153!2.39e-08!94;UBERON:0002780!7.14e-08!39;UBERON:0001890!7.14e-08!39;UBERON:0006240!7.14e-08!39;UBERON:0000025!3.11e-07!114;UBERON:0002021!3.52e-07!10;UBERON:0000411!3.52e-07!10;UBERON:0001950!3.52e-07!10;UBERON:0007023!3.53e-07!51;UBERON:0004111!3.79e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.87e-26,54;UBERON:0001049,1.22e-22,52;UBERON:0005068,1.22e-22,52;UBERON:0006241,1.22e-22,52;UBERON:0007135,1.22e-22,52;UBERON:0001017,2.00e-20,73;UBERON:0003076,5.90e-20,12;UBERON:0003057,5.90e-20,12;UBERON:0001016,9.34e-20,75;UBERON:0010371,1.78e-18,73;UBERON:0004121,8.25e-18,95;UBERON:0000924,8.25e-18,95;UBERON:0006601,8.25e-18,95;UBERON:0002346,1.36e-17,64;UBERON:0003075,1.36e-17,64;UBERON:0007284,1.36e-17,64;UBERON:0002616,1.28e-14,46;UBERON:0000955,3.09e-14,47;UBERON:0006238,3.09e-14,47;UBERON:0002950,1.69e-13,4;UBERON:0001891,1.69e-13,4;UBERON:0009616,1.69e-13,4;UBERON:0010286,1.69e-13,4;UBERON:0002020,2.60e-12,34;UBERON:0002240,3.04e-12,6;UBERON:0005174,3.04e-12,6;UBERON:0001137,3.04e-12,6;UBERON:0010314,6.23e-11,92;UBERON:0002038,2.87e-10,3;UBERON:0009663,2.87e-10,3;UBERON:0009661,2.87e-10,3;UBERON:0000125,2.87e-10,3;UBERON:0002308,2.87e-10,3;UBERON:0004684,4.11e-10,3;UBERON:0002275,4.11e-10,3;UBERON:0001948,2.39e-09,5;UBERON:0002315,2.39e-09,5;UBERON:0004733,2.53e-09,6;UBERON:0004732,2.53e-09,6;UBERON:0002028,2.53e-09,6;UBERON:0007277,2.53e-09,6;UBERON:0003080,5.13e-09,40;UBERON:0000025,5.25e-09,114;UBERON:0004111,4.02e-08,122;UBERON:0001896,5.09e-08,2;UBERON:0002298,5.09e-08,2;UBERON:0005290,5.09e-08,2;UBERON:0010096,5.09e-08,2;UBERON:0007023,5.71e-08,51;UBERON:0002780,1.29e-07,39;UBERON:0001890,1.29e-07,39;UBERON:0006240,1.29e-07,39;UBERON:0001911,2.79e-07,2;UBERON:0000076,2.79e-07,2;UBERON:0005333,2.79e-07,2;UBERON:0008425,2.79e-07,2;UBERON:0005311,2.79e-07,2;UBERON:0003528,4.64e-07,29;UBERON:0002791,4.64e-07,29;UBERON:0001893,4.64e-07,29;UBERON:0003056,6.10e-07,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.76694832761291,0,0,0,2.20231761998777,3.06449611404451,2.30409799884365,0.131886287730194,0.0914876436024097,0,2.23346399201105,2.8138130501584,3.66715794664344,1.76777151284201,1.13897344639282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,3.97948742945565,0,0,0,0,6.74057877321702,0.915001205637253,0.251308704225729,2.08589184230732,2.30143911597297,4.98691306942944,3.56930778749067,0,0.124406970610093,1.76905930903572,0.210441855886474,0,0,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78521907415429,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0.335012514883631,0,0,0.945810864637146,0.44292937929755,0.637819074629948,0.491589944147214,0.690739927463582,0.289298117163023,0,0,2.95058563811422,2.20749397043786,5.13761887960934,6.32943107597897,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.484393280087717,0.180938774784468,0.358117032009409,0.328281799490123,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.734015410979976,0.724752362478018,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.73260649706906,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0,0.755393897389701,0,1.35096360967266,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355905054372522,0,0,0,0.385813221962283,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0|short_description=p3@Atp13a4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=224079 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=E9QPP7,Q5XF90 | |||
|association_with_transcript=-58bp_to_ENSMUST00000057018,NM_001164612,NM_172613,uc007ywa.2,uc012aec.1_5end | |||
|cluster_id=chr16:29541627..29541644,- | |||
|description=CAGE_peak_3_at_Atp13a4_5end | |||
|id=chr16:29541627..29541644,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.51e-11,23;CL:0000337,1.51e-11,23;CL:0002614,2.87e-10,3;CL:0002610,4.11e-10,3;CL:0000540,1.61e-07,33;CL:0000047,1.61e-07,33;CL:0000031,1.61e-07,33;CL:0000404,1.61e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.30e-16!63;UBERON:0004121!4.54e-16!102;UBERON:0000924!4.54e-16!102;UBERON:0006601!4.54e-16!102;UBERON:0001049!2.67e-15!52;UBERON:0005068!2.67e-15!52;UBERON:0006241!2.67e-15!52;UBERON:0007135!2.67e-15!52;UBERON:0000955!6.88e-15!50;UBERON:0006238!6.88e-15!50;UBERON:0002616!4.06e-14!49;UBERON:0002346!1.03e-12!71;UBERON:0003075!1.03e-12!71;UBERON:0007284!1.03e-12!71;UBERON:0002020!2.31e-12!34;UBERON:0001017!4.24e-12!73;UBERON:0005743!4.24e-12!73;UBERON:0000073!1.68e-11!75;UBERON:0001016!1.68e-11!75;UBERON:0003056!6.23e-10!49;UBERON:0002791!1.95e-09!29;UBERON:0003528!1.95e-09!29;UBERON:0001893!1.95e-09!29;UBERON:0007811!2.53e-09!86;UBERON:0002298!3.15e-09!6;UBERON:0003080!1.02e-08!40;UBERON:0003076!1.56e-08!12;UBERON:0003057!1.56e-08!12;UBERON:0000153!2.39e-08!94;UBERON:0002780!7.14e-08!39;UBERON:0001890!7.14e-08!39;UBERON:0006240!7.14e-08!39;UBERON:0000025!3.11e-07!114;UBERON:0002021!3.52e-07!10;UBERON:0000411!3.52e-07!10;UBERON:0001950!3.52e-07!10;UBERON:0007023!3.53e-07!51;UBERON:0004111!3.79e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.87e-26,54;UBERON:0001049,1.22e-22,52;UBERON:0005068,1.22e-22,52;UBERON:0006241,1.22e-22,52;UBERON:0007135,1.22e-22,52;UBERON:0001017,2.00e-20,73;UBERON:0003076,5.90e-20,12;UBERON:0003057,5.90e-20,12;UBERON:0001016,9.34e-20,75;UBERON:0010371,1.78e-18,73;UBERON:0004121,8.25e-18,95;UBERON:0000924,8.25e-18,95;UBERON:0006601,8.25e-18,95;UBERON:0002346,1.36e-17,64;UBERON:0003075,1.36e-17,64;UBERON:0007284,1.36e-17,64;UBERON:0002616,1.28e-14,46;UBERON:0000955,3.09e-14,47;UBERON:0006238,3.09e-14,47;UBERON:0002950,1.69e-13,4;UBERON:0001891,1.69e-13,4;UBERON:0009616,1.69e-13,4;UBERON:0010286,1.69e-13,4;UBERON:0002020,2.60e-12,34;UBERON:0002240,3.04e-12,6;UBERON:0005174,3.04e-12,6;UBERON:0001137,3.04e-12,6;UBERON:0010314,6.23e-11,92;UBERON:0002038,2.87e-10,3;UBERON:0009663,2.87e-10,3;UBERON:0009661,2.87e-10,3;UBERON:0000125,2.87e-10,3;UBERON:0002308,2.87e-10,3;UBERON:0004684,4.11e-10,3;UBERON:0002275,4.11e-10,3;UBERON:0001948,2.39e-09,5;UBERON:0002315,2.39e-09,5;UBERON:0004733,2.53e-09,6;UBERON:0004732,2.53e-09,6;UBERON:0002028,2.53e-09,6;UBERON:0007277,2.53e-09,6;UBERON:0003080,5.13e-09,40;UBERON:0000025,5.25e-09,114;UBERON:0004111,4.02e-08,122;UBERON:0001896,5.09e-08,2;UBERON:0002298,5.09e-08,2;UBERON:0005290,5.09e-08,2;UBERON:0010096,5.09e-08,2;UBERON:0007023,5.71e-08,51;UBERON:0002780,1.29e-07,39;UBERON:0001890,1.29e-07,39;UBERON:0006240,1.29e-07,39;UBERON:0001911,2.79e-07,2;UBERON:0000076,2.79e-07,2;UBERON:0005333,2.79e-07,2;UBERON:0008425,2.79e-07,2;UBERON:0005311,2.79e-07,2;UBERON:0003528,4.64e-07,29;UBERON:0002791,4.64e-07,29;UBERON:0001893,4.64e-07,29;UBERON:0003056,6.10e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.76694832761291,0,0,0,2.20231761998777,3.06449611404451,2.30409799884365,0.131886287730194,0.0914876436024097,0,2.23346399201105,2.8138130501584,3.66715794664344,1.76777151284201,1.13897344639282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92780797011547,3.97948742945565,0,0,0,0,6.74057877321702,0.915001205637253,0.251308704225729,2.08589184230732,2.30143911597297,4.98691306942944,3.56930778749067,0,0.124406970610093,1.76905930903572,0.210441855886474,0,0,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78521907415429,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0.335012514883631,0,0,0.945810864637146,0.44292937929755,0.637819074629948,0.491589944147214,0.690739927463582,0.289298117163023,0,0,2.95058563811422,2.20749397043786,5.13761887960934,6.32943107597897,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.484393280087717,0.180938774784468,0.358117032009409,0.328281799490123,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0.621339313086926,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0.734015410979976,0.724752362478018,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0.73260649706906,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0,0.755393897389701,0,1.35096360967266,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355905054372522,0,0,0,0.385813221962283,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p3@Atp13a4 | |||
}} |
Latest revision as of 20:33, 1 October 2015
Short description: | p3@Atp13a4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Atp13a4_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -58bp_to_ENSMUST00000057018, NM_001164612, NM_172613, uc007ywa.2, uc012aec.1_5end |
EntrezGene: | Atp13a4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.51e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.51e-11 | 23 |
neuron of the substantia nigra | 2.87e-10 | 3 |
raphe nuclei neuron | 4.11e-10 | 3 |
neuron | 1.61e-07 | 33 |
neuronal stem cell | 1.61e-07 | 33 |
neuroblast | 1.61e-07 | 33 |
electrically signaling cell | 1.61e-07 | 33 |