FFCP PHASE1:Mm9::chr6:91107077..91107093,+: Difference between revisions
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{{FFCP|EntrezGene=232232|HGNC=|MCL_coexpression_id=287|UniProt=|association_with_transcript=-64bp_to_ENSMUST00000127768_5end|description=CAGE_peak_6_at_Hdac11_5end|id=chr6:91107077..91107093,+|ontology_enrichment_celltype=CL:0000117!4.14e-14!23;CL:0000337!4.14e-14!23;CL:0000540!4.17e-14!33;CL:0000047!4.17e-14!33;CL:0000031!4.17e-14!33;CL:0000404!4.17e-14!33;CL:0000393!2.36e-10!39;CL:0000211!2.36e-10!39;CL:0002319!4.62e-09!43;CL:0000221!1.23e-08!44;CL:0000133!1.23e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,2.68e-17,23;CL:0000337,2.68e-17,23;CL:0000540,3.31e-13,33;CL:0000047,3.31e-13,33;CL:0000031,3.31e-13,33;CL:0000404,3.31e-13,33;CL:0000393,9.44e-11,39;CL:0000211,9.44e-11,39;CL:0002614,1.65e-10,3;CL:0002610,3.10e-10,3;CL:0002319,1.69e-09,43;CL:0000221,3.20e-09,44;CL:0000133,3.20e-09,44;CL:0002612,3.52e-09,3;CL:0002611,1.51e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.64e-20!73;UBERON:0005743!5.64e-20!73;UBERON:0000073!1.31e-19!75;UBERON:0001016!1.31e-19!75;UBERON:0002346!1.65e-16!71;UBERON:0003075!1.65e-16!71;UBERON:0007284!1.65e-16!71;UBERON:0001049!6.24e-16!52;UBERON:0005068!6.24e-16!52;UBERON:0006241!6.24e-16!52;UBERON:0007135!6.24e-16!52;UBERON:0004121!6.65e-16!102;UBERON:0000924!6.65e-16!102;UBERON:0006601!6.65e-16!102;UBERON:0000033!5.87e-15!63;UBERON:0000955!2.35e-14!50;UBERON:0006238!2.35e-14!50;UBERON:0002020!6.97e-14!34;UBERON:0002616!7.78e-14!49;UBERON:0003056!5.27e-13!49;UBERON:0003080!1.76e-11!40;UBERON:0002780!8.97e-11!39;UBERON:0001890!8.97e-11!39;UBERON:0006240!8.97e-11!39;UBERON:0007811!1.49e-10!86;UBERON:0000153!3.85e-10!94;UBERON:0002791!5.55e-10!29;UBERON:0003528!5.55e-10!29;UBERON:0001893!5.55e-10!29;UBERON:0002420!7.26e-08!8;UBERON:0007245!7.26e-08!8;UBERON:0010009!7.26e-08!8;UBERON:0010011!7.26e-08!8;UBERON:0000454!7.26e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.76e-30,54;UBERON:0001017,6.43e-25,73;UBERON:0002020,1.05e-24,34;UBERON:0001016,4.10e-24,75;UBERON:0001049,2.69e-23,52;UBERON:0005068,2.69e-23,52;UBERON:0006241,2.69e-23,52;UBERON:0007135,2.69e-23,52;UBERON:0002346,8.71e-22,64;UBERON:0003075,8.71e-22,64;UBERON:0007284,8.71e-22,64;UBERON:0004121,1.83e-19,95;UBERON:0000924,1.83e-19,95;UBERON:0006601,1.83e-19,95;UBERON:0010371,1.72e-18,73;UBERON:0003080,1.06e-15,40;UBERON:0001948,4.48e-15,5;UBERON:0002315,4.48e-15,5;UBERON:0002616,4.72e-15,46;UBERON:0003528,1.13e-14,29;UBERON:0002791,1.13e-14,29;UBERON:0001893,1.13e-14,29;UBERON:0000955,1.18e-14,47;UBERON:0006238,1.18e-14,47;UBERON:0002780,4.64e-14,39;UBERON:0001890,4.64e-14,39;UBERON:0006240,4.64e-14,39;UBERON:0003056,8.03e-14,49;UBERON:0010314,1.20e-13,92;UBERON:0002950,4.24e-13,4;UBERON:0001891,4.24e-13,4;UBERON:0009616,4.24e-13,4;UBERON:0010286,4.24e-13,4;UBERON:0002240,1.63e-12,6;UBERON:0005174,1.63e-12,6;UBERON:0001137,1.63e-12,6;UBERON:0002038,1.65e-10,3;UBERON:0009663,1.65e-10,3;UBERON:0009661,1.65e-10,3;UBERON:0000125,1.65e-10,3;UBERON:0002308,1.65e-10,3;UBERON:0004684,3.10e-10,3;UBERON:0002275,3.10e-10,3;UBERON:0002021,6.62e-10,10;UBERON:0000411,6.62e-10,10;UBERON:0001950,6.62e-10,10;UBERON:0002420,1.16e-09,8;UBERON:0007245,1.16e-09,8;UBERON:0010009,1.16e-09,8;UBERON:0010011,1.16e-09,8;UBERON:0000454,1.16e-09,8;UBERON:0002257,3.52e-09,3;UBERON:0003076,1.95e-08,12;UBERON:0003057,1.95e-08,12;UBERON:0000025,4.27e-08,114;UBERON:0002256,1.51e-07,2;UBERON:0000956,1.53e-07,21;UBERON:0001869,1.53e-07,21;UBERON:0000203,1.53e-07,21;UBERON:0002619,1.67e-07,17;UBERON:0004111,2.91e-07,122|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,5.14171771926846,3.75476519617743,0.244981598429908,0.191690942036473,0,4.40463523997555,2.55374676170375,4.14737639791857,0.659431438650969,0.731901148819277,0.52091337055676,8.09630697104005,5.06486349028512,3.20876320331301,2.65165726926301,1.42371680799103,1.1183966749518,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,1.64769703345305,3.20250421973039,1.13088916901578,1.04294592115366,1.27857728665165,3.32460871295296,1.62241263067758,0.101839363850316,0.248813941220186,0.758168275301024,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0.187403449119458,1.03481348295606,0,0.756424320671277,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.393528463494808,0,0,0.268273401399619,0,0,0,0,0,0,0,1.89260953707715,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.228497025219458,1.1270773567308,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232232 | |||
|HGNC= | |||
|MCL_coexpression_id=287 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-64bp_to_ENSMUST00000127768_5end | |||
|cluster_id=chr6:91107077..91107093,+ | |||
|description=CAGE_peak_6_at_Hdac11_5end | |||
|id=chr6:91107077..91107093,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.14e-14!23;CL:0000337!4.14e-14!23;CL:0000540!4.17e-14!33;CL:0000047!4.17e-14!33;CL:0000031!4.17e-14!33;CL:0000404!4.17e-14!33;CL:0000393!2.36e-10!39;CL:0000211!2.36e-10!39;CL:0002319!4.62e-09!43;CL:0000221!1.23e-08!44;CL:0000133!1.23e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.68e-17,23;CL:0000337,2.68e-17,23;CL:0000540,3.31e-13,33;CL:0000047,3.31e-13,33;CL:0000031,3.31e-13,33;CL:0000404,3.31e-13,33;CL:0000393,9.44e-11,39;CL:0000211,9.44e-11,39;CL:0002614,1.65e-10,3;CL:0002610,3.10e-10,3;CL:0002319,1.69e-09,43;CL:0000221,3.20e-09,44;CL:0000133,3.20e-09,44;CL:0002612,3.52e-09,3;CL:0002611,1.51e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.64e-20!73;UBERON:0005743!5.64e-20!73;UBERON:0000073!1.31e-19!75;UBERON:0001016!1.31e-19!75;UBERON:0002346!1.65e-16!71;UBERON:0003075!1.65e-16!71;UBERON:0007284!1.65e-16!71;UBERON:0001049!6.24e-16!52;UBERON:0005068!6.24e-16!52;UBERON:0006241!6.24e-16!52;UBERON:0007135!6.24e-16!52;UBERON:0004121!6.65e-16!102;UBERON:0000924!6.65e-16!102;UBERON:0006601!6.65e-16!102;UBERON:0000033!5.87e-15!63;UBERON:0000955!2.35e-14!50;UBERON:0006238!2.35e-14!50;UBERON:0002020!6.97e-14!34;UBERON:0002616!7.78e-14!49;UBERON:0003056!5.27e-13!49;UBERON:0003080!1.76e-11!40;UBERON:0002780!8.97e-11!39;UBERON:0001890!8.97e-11!39;UBERON:0006240!8.97e-11!39;UBERON:0007811!1.49e-10!86;UBERON:0000153!3.85e-10!94;UBERON:0002791!5.55e-10!29;UBERON:0003528!5.55e-10!29;UBERON:0001893!5.55e-10!29;UBERON:0002420!7.26e-08!8;UBERON:0007245!7.26e-08!8;UBERON:0010009!7.26e-08!8;UBERON:0010011!7.26e-08!8;UBERON:0000454!7.26e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.76e-30,54;UBERON:0001017,6.43e-25,73;UBERON:0002020,1.05e-24,34;UBERON:0001016,4.10e-24,75;UBERON:0001049,2.69e-23,52;UBERON:0005068,2.69e-23,52;UBERON:0006241,2.69e-23,52;UBERON:0007135,2.69e-23,52;UBERON:0002346,8.71e-22,64;UBERON:0003075,8.71e-22,64;UBERON:0007284,8.71e-22,64;UBERON:0004121,1.83e-19,95;UBERON:0000924,1.83e-19,95;UBERON:0006601,1.83e-19,95;UBERON:0010371,1.72e-18,73;UBERON:0003080,1.06e-15,40;UBERON:0001948,4.48e-15,5;UBERON:0002315,4.48e-15,5;UBERON:0002616,4.72e-15,46;UBERON:0003528,1.13e-14,29;UBERON:0002791,1.13e-14,29;UBERON:0001893,1.13e-14,29;UBERON:0000955,1.18e-14,47;UBERON:0006238,1.18e-14,47;UBERON:0002780,4.64e-14,39;UBERON:0001890,4.64e-14,39;UBERON:0006240,4.64e-14,39;UBERON:0003056,8.03e-14,49;UBERON:0010314,1.20e-13,92;UBERON:0002950,4.24e-13,4;UBERON:0001891,4.24e-13,4;UBERON:0009616,4.24e-13,4;UBERON:0010286,4.24e-13,4;UBERON:0002240,1.63e-12,6;UBERON:0005174,1.63e-12,6;UBERON:0001137,1.63e-12,6;UBERON:0002038,1.65e-10,3;UBERON:0009663,1.65e-10,3;UBERON:0009661,1.65e-10,3;UBERON:0000125,1.65e-10,3;UBERON:0002308,1.65e-10,3;UBERON:0004684,3.10e-10,3;UBERON:0002275,3.10e-10,3;UBERON:0002021,6.62e-10,10;UBERON:0000411,6.62e-10,10;UBERON:0001950,6.62e-10,10;UBERON:0002420,1.16e-09,8;UBERON:0007245,1.16e-09,8;UBERON:0010009,1.16e-09,8;UBERON:0010011,1.16e-09,8;UBERON:0000454,1.16e-09,8;UBERON:0002257,3.52e-09,3;UBERON:0003076,1.95e-08,12;UBERON:0003057,1.95e-08,12;UBERON:0000025,4.27e-08,114;UBERON:0002256,1.51e-07,2;UBERON:0000956,1.53e-07,21;UBERON:0001869,1.53e-07,21;UBERON:0000203,1.53e-07,21;UBERON:0002619,1.67e-07,17;UBERON:0004111,2.91e-07,122 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,0.103689612308478,0,0.210324961351382,5.14171771926846,3.75476519617743,0.244981598429908,0.191690942036473,0,4.40463523997555,2.55374676170375,4.14737639791857,0.659431438650969,0.731901148819277,0.52091337055676,8.09630697104005,5.06486349028512,3.20876320331301,2.65165726926301,1.42371680799103,1.1183966749518,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0.209446706813455,0,0,0,0,1.64769703345305,3.20250421973039,1.13088916901578,1.04294592115366,1.27857728665165,3.32460871295296,1.62241263067758,0.101839363850316,0.248813941220186,0.758168275301024,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0.187403449119458,1.03481348295606,0,0.756424320671277,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.393528463494808,0,0,0.268273401399619,0,0,0,0,0,0,0,1.89260953707715,0.102904612379284,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0.228497025219458,1.1270773567308,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,0.937693492737625,0,0,0.315508219416257,0.390438744296638,1.07711698866399,0,0,0,0,0.292255857911312,0.395287777946524,0.321321316421807,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0,0,0.614870295887855,0,0,1.06949213515416,0.316036757935816,0,0,0.680879211507576,0,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0,0.180938774784468,0.119372344003136,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0.405450430580328,0.102710957164827,0.25984164595559,0,0.39736270956253,0,0,0.201932899896295,0.15241361331,0,0,0,0,0,0,0,0,0,0.750729901804728,0,0,0,1.12950368523413,0,0,0.68741272937475,2.05524755931193,3.0215755895588,1.35004500046361,1.35096360967266,0,1.55328093525546,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0.188626341386076,0,0.192075457214608,0.229741875822453,0,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0.561142271657738,0,0.0985044823755635,0,0.309873682371932,0,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p6@Hdac11 | |||
}} |
Latest revision as of 22:11, 1 October 2015
Short description: | p6@Hdac11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Hdac11_5end |
Coexpression cluster: | MCL_coexpression_mm9:287 |
Association with transcript: | -64bp_to_ENSMUST00000127768_5end |
EntrezGene: | Hdac11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.68e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.68e-17 | 23 |
neuron | 3.31e-13 | 33 |
neuronal stem cell | 3.31e-13 | 33 |
neuroblast | 3.31e-13 | 33 |
electrically signaling cell | 3.31e-13 | 33 |
electrically responsive cell | 9.44e-11 | 39 |
electrically active cell | 9.44e-11 | 39 |
neuron of the substantia nigra | 1.65e-10 | 3 |
raphe nuclei neuron | 3.10e-10 | 3 |
neural cell | 1.69e-09 | 43 |
ectodermal cell | 3.20e-09 | 44 |
neurectodermal cell | 3.20e-09 | 44 |
neuron of the ventral spinal cord | 3.52e-09 | 3 |
neuron of the dorsal spinal cord | 1.51e-07 | 2 |