FF:10031-101E4: Difference between revisions

Latest revision as of 12:15, 3 June 2020

Name:	temporal lobe, adult, pool1
Species:	Human (Homo sapiens)
Library ID:	CNhs10637
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	temporal lobe
dev stage	32-61 years old adult
sex	mixed
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	Clontech
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	7090051
catalog number	Cat:636564
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004819

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10637		CAGE		DRX008736		DRR009608

Accession ID Hg19

Library id		BAM		CTSS
CNhs10637		DRZ001033		DRZ002418

Accession ID Hg38

Library id		BAM		CTSS
CNhs10637		DRZ012383		DRZ013768

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.347
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.184
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.431
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0.0554
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.128
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.529
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.161
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.169
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.149
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0.0806
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0.104
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0286
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0431
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.323
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.0554
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.00866
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.149
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0264
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.809
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.0286
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.0746
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.483
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0554
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0.0286
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.586
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.225
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0286
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0921
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.453
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0179
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0.373
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.169
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.0106
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.501
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.255
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.483
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0554
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0.169
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.169
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.0286
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.745
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.104
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0.169
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0.397
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0463
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.104
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.0286
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10637

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00871
MA0003.1	MA0003.1	0.471
MA0004.1	MA0004.1	0.523
MA0006.1	MA0006.1	0.44
MA0007.1	MA0007.1	0.228
MA0009.1	MA0009.1	0.176
MA0014.1	MA0014.1	0.577
MA0017.1	MA0017.1	0.00699
MA0018.2	MA0018.2	0.0405
MA0019.1	MA0019.1	0.571
MA0024.1	MA0024.1	0.805
MA0025.1	MA0025.1	0.18
MA0027.1	MA0027.1	0.549
MA0028.1	MA0028.1	0.0464
MA0029.1	MA0029.1	0.207
MA0030.1	MA0030.1	0.168
MA0031.1	MA0031.1	0.912
MA0035.2	MA0035.2	0.207
MA0038.1	MA0038.1	0.0518
MA0039.2	MA0039.2	0.265
MA0040.1	MA0040.1	0.383
MA0041.1	MA0041.1	0.143
MA0042.1	MA0042.1	0.63
MA0043.1	MA0043.1	0.357
MA0046.1	MA0046.1	0.394
MA0047.2	MA0047.2	0.095
MA0048.1	MA0048.1	0.0836
MA0050.1	MA0050.1	0.00251
MA0051.1	MA0051.1	0.0784
MA0052.1	MA0052.1	0.0449
MA0055.1	MA0055.1	0.0022
MA0057.1	MA0057.1	0.918
MA0058.1	MA0058.1	0.475
MA0059.1	MA0059.1	0.0869
MA0060.1	MA0060.1	0.178
MA0061.1	MA0061.1	0.00787
MA0062.2	MA0062.2	0.00877
MA0065.2	MA0065.2	0.00141
MA0066.1	MA0066.1	0.0389
MA0067.1	MA0067.1	0.763
MA0068.1	MA0068.1	0.139
MA0069.1	MA0069.1	0.46
MA0070.1	MA0070.1	0.0305
MA0071.1	MA0071.1	0.0644
MA0072.1	MA0072.1	0.603
MA0073.1	MA0073.1	0.569
MA0074.1	MA0074.1	0.241
MA0076.1	MA0076.1	0.124
MA0077.1	MA0077.1	0.175
MA0078.1	MA0078.1	0.932
MA0079.2	MA0079.2	0.274
MA0080.2	MA0080.2	5.27052e-8
MA0081.1	MA0081.1	0.0462
MA0083.1	MA0083.1	0.244
MA0084.1	MA0084.1	0.83
MA0087.1	MA0087.1	0.401
MA0088.1	MA0088.1	0.124
MA0090.1	MA0090.1	0.296
MA0091.1	MA0091.1	0.683
MA0092.1	MA0092.1	0.461
MA0093.1	MA0093.1	0.54
MA0099.2	MA0099.2	1.96909e-9
MA0100.1	MA0100.1	0.442
MA0101.1	MA0101.1	0.00302
MA0102.2	MA0102.2	0.148
MA0103.1	MA0103.1	0.344
MA0104.2	MA0104.2	0.402
MA0105.1	MA0105.1	2.08375e-4
MA0106.1	MA0106.1	0.0249
MA0107.1	MA0107.1	0.00745
MA0108.2	MA0108.2	0.0868
MA0111.1	MA0111.1	0.36
MA0112.2	MA0112.2	0.00115
MA0113.1	MA0113.1	0.248
MA0114.1	MA0114.1	0.00537
MA0115.1	MA0115.1	0.544
MA0116.1	MA0116.1	0.00288
MA0117.1	MA0117.1	0.885
MA0119.1	MA0119.1	0.0289
MA0122.1	MA0122.1	0.815
MA0124.1	MA0124.1	0.718
MA0125.1	MA0125.1	0.208
MA0131.1	MA0131.1	0.757
MA0135.1	MA0135.1	0.00408
MA0136.1	MA0136.1	1.10241e-9
MA0137.2	MA0137.2	0.193
MA0138.2	MA0138.2	0.108
MA0139.1	MA0139.1	0.424
MA0140.1	MA0140.1	0.0119
MA0141.1	MA0141.1	0.0303
MA0142.1	MA0142.1	0.97
MA0143.1	MA0143.1	0.869
MA0144.1	MA0144.1	0.196
MA0145.1	MA0145.1	0.266
MA0146.1	MA0146.1	0.0169
MA0147.1	MA0147.1	0.288
MA0148.1	MA0148.1	0.0851
MA0149.1	MA0149.1	0.0141
MA0150.1	MA0150.1	0.00136
MA0152.1	MA0152.1	0.642
MA0153.1	MA0153.1	0.545
MA0154.1	MA0154.1	0.0513
MA0155.1	MA0155.1	0.917
MA0156.1	MA0156.1	6.9137e-6
MA0157.1	MA0157.1	0.615
MA0159.1	MA0159.1	0.00858
MA0160.1	MA0160.1	0.0587
MA0162.1	MA0162.1	0.127
MA0163.1	MA0163.1	6.53645e-7
MA0164.1	MA0164.1	0.819
MA0258.1	MA0258.1	0.0154
MA0259.1	MA0259.1	0.689

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10637

Novel motif	Logo	P-value
1	1	0.027
10	10	0.017
100	100	0.273
101	101	0.978
102	102	0.663
103	103	0.173
104	104	0.194
105	105	0.489
106	106	0.0913
107	107	0.148
108	108	0.95
109	109	0.0108
11	11	0.0159
110	110	0.0373
111	111	0.0517
112	112	0.405
113	113	0.76
114	114	0.0725
115	115	0.964
116	116	0.236
117	117	0.00724
118	118	0.0939
119	119	0.0985
12	12	0.835
120	120	0.133
121	121	0.751
122	122	0.443
123	123	0.344
124	124	0.0803
125	125	0.134
126	126	0.0326
127	127	0.567
128	128	0.211
129	129	0.574
13	13	9.20416e-4
130	130	0.545
131	131	0.091
132	132	0.604
133	133	0.00349
134	134	0.256
135	135	0.197
136	136	0.00936
137	137	0.674
138	138	0.867
139	139	0.0861
14	14	0.967
140	140	0.117
141	141	0.221
142	142	0.963
143	143	0.0121
144	144	0.862
145	145	0.105
146	146	0.657
147	147	0.861
148	148	0.15
149	149	0.451
15	15	0.06
150	150	0.165
151	151	0.701
152	152	0.179
153	153	0.528
154	154	0.651
155	155	0.343
156	156	0.403
157	157	0.376
158	158	0.711
159	159	0.164
16	16	0.0756
160	160	0.243
161	161	0.188
162	162	0.902
163	163	0.802
164	164	0.0125
165	165	0.0252
166	166	0.776
167	167	0.167
168	168	0.716
169	169	0.00775
17	17	0.217
18	18	0.239
19	19	0.245
2	2	0.9
20	20	0.0733
21	21	0.113
22	22	0.329
23	23	0.456
24	24	0.148
25	25	0.424
26	26	1.01354e-4
27	27	0.921
28	28	0.551
29	29	0.00632
3	3	0.0157
30	30	0.438
31	31	0.946
32	32	0.0463
33	33	0.0663
34	34	0.984
35	35	0.467
36	36	0.101
37	37	0.0356
38	38	0.323
39	39	0.294
4	4	0.95
40	40	0.0749
41	41	0.45
42	42	0.119
43	43	0.106
44	44	0.115
45	45	0.922
46	46	0.056
47	47	0.0552
48	48	0.053
49	49	0.123
5	5	0.376
50	50	0.375
51	51	0.561
52	52	0.735
53	53	0.934
54	54	0.511
55	55	0.278
56	56	0.512
57	57	0.238
58	58	0.25
59	59	0.229
6	6	0.524
60	60	0.0898
61	61	0.0656
62	62	0.141
63	63	0.178
64	64	0.228
65	65	0.363
66	66	0.268
67	67	0.3
68	68	0.245
69	69	0.569
7	7	0.0463
70	70	0.0252
71	71	0.00758
72	72	0.492
73	73	0.0508
74	74	0.43
75	75	0.0217
76	76	0.266
77	77	0.318
78	78	0.00179
79	79	0.321
8	8	0.0669
80	80	0.98
81	81	0.531
82	82	0.481
83	83	0.222
84	84	0.694
85	85	0.324
86	86	0.19
87	87	0.0177
88	88	0.851
89	89	0.681
9	9	0.641
90	90	0.018
91	91	0.331
92	92	0.407
93	93	0.827
94	94	0.0596
95	95	0.0301
96	96	0.955
97	97	0.799
98	98	0.18
99	99	0.949

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10637

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0010031 human temporal lobe - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001871 (temporal lobe)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010031 (human temporal lobe - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|id=FF:10031-101E4
+|DRA_sample_Accession=CAGE@SAMD00004819
-|name=temporal lobe, adult, pool1
+|accession_numbers=CAGE;DRX008736;DRR009608;DRZ001033;DRZ002418;DRZ012383;DRZ013768
-|sample_id=10031
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001871,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950
-|rna_tube_id=101E4
-|rna_box=101
-|rna_position=E4
-|sample_cell_lot=NA
-|sample_cell_catalog=NA
-|sample_company=Clontech
-|rna_lot_number=7090051
-|rna_catalog_number=Cat:636564
-|sample_species=Human (Homo sapiens)
-|sample_strain=
-|sample_dev_stage=32-61 years old adult
-|sample_tissue=temporal lobe
-|sample_donor(cell lot)=8 pool
-|sample_sex=mixed
-|sample_age=
-|sample_ethnicity=C
-|rna_rin=
-|rna_od260/230=
-|rna_od260/280=
-|sample_cell_type=CELL MIXTURE - tissue sample
-|sample_cell_line=
-|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
-|sample_experimental_condition=
-|sample_disease=normal
-|rna_sample_type=total RNA
-|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
-|rna_weight_ug=50
-|rna_concentration=1
-|sample_note=
-|profile_hcage=CNhs10637,LSID657,release008,COMPLETED
-|profile_cagescan=,,,
-|profile_srnaseq=,,,
-|profile_rnaseq=,,,
 |ancestors_in_cell_lineage_facet=
-|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0000956,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001869,UBERON:0001871,UBERON:0001890,UBERON:0001893,UBERON:0001950,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0002616,UBERON:0002619,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
 |ancestors_in_disease_facet=
-|sample_description=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010031
+|comment=
+|created_by=
+|creation_date=
+|data_phase=2
+|datafreeze_phase=2
+|def=
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 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 66: / Line 41: @@
 |fonse_treatment=
 |fonse_treatment_closure=
-|top_motifs=
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+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/temporal%2520lobe%252c%2520adult%252c%2520pool1.CNhs10637.10031-101E4.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/temporal%2520lobe%252c%2520adult%252c%2520pool1.CNhs10637.10031-101E4.hg19.nobarcode.rdna.fa.gz
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+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10031
+|name=temporal lobe, adult, pool1
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+|rna_box=101
+|rna_catalog_number=Cat:636564
+|rna_concentration=1
+|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0
+|rna_lot_number=7090051
+|rna_od260/230=
+|rna_od260/280=
+|rna_position=E4
+|rna_rin=
+|rna_sample_type=total RNA
+|rna_tube_id=1.01E+06
+|rna_weight_ug=50
+|sample_age=
+|sample_category=tissues
+|sample_cell_catalog=NA
+|sample_cell_line=
+|sample_cell_lot=NA
+|sample_cell_type=CELL MIXTURE - tissue sample
+|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
+|sample_company=Clontech
+|sample_description=
+|sample_dev_stage=32-61 years old adult
+|sample_disease=normal
+|sample_donor(cell lot)=8 pool
+|sample_ethnicity=C
+|sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.85531308809069e-311!GO:0005737;cytoplasm;4.41193243068622e-159!GO:0044444;cytoplasmic part;2.05402909485358e-107!GO:0043226;organelle;2.2513198965705e-81!GO:0043229;intracellular organelle;6.08189866734704e-81!GO:0043227;membrane-bound organelle;1.20276713073507e-77!GO:0043231;intracellular membrane-bound organelle;1.59625812510164e-77!GO:0005515;protein binding;6.74073930333027e-63!GO:0044422;organelle part;1.49910490492771e-61!GO:0044446;intracellular organelle part;1.574081663059e-60!GO:0032991;macromolecular complex;3.31438325368084e-54!GO:0005739;mitochondrion;8.05658872876435e-44!GO:0016043;cellular component organization and biogenesis;4.26543165330301e-43!GO:0031090;organelle membrane;5.45858703199479e-43!GO:0015031;protein transport;3.67908152865733e-36!GO:0033036;macromolecule localization;6.64439941228374e-36!GO:0030529;ribonucleoprotein complex;1.9879903180174e-35!GO:0044429;mitochondrial part;2.78610263587556e-33!GO:0008104;protein localization;3.23742616943419e-33!GO:0045184;establishment of protein localization;2.10851270047735e-32!GO:0043234;protein complex;3.9166337170201e-31!GO:0003723;RNA binding;3.0338942169319e-30!GO:0046907;intracellular transport;6.51446724685317e-29!GO:0031975;envelope;8.96794956555149e-28!GO:0031967;organelle envelope;1.41442755525788e-27!GO:0051649;establishment of cellular localization;4.57474765042635e-27!GO:0051641;cellular localization;6.75002167796669e-27!GO:0016192;vesicle-mediated transport;8.32990103811542e-27!GO:0043233;organelle lumen;8.32990103811542e-27!GO:0031974;membrane-enclosed lumen;8.32990103811542e-27!GO:0005740;mitochondrial envelope;8.86969264731727e-24!GO:0031966;mitochondrial membrane;2.75728699030169e-23!GO:0044428;nuclear part;5.22292959240342e-23!GO:0019538;protein metabolic process;6.01223996692779e-23!GO:0005829;cytosol;7.15330847478577e-22!GO:0005840;ribosome;1.15762355501092e-21!GO:0005794;Golgi apparatus;1.22352912546857e-21!GO:0006119;oxidative phosphorylation;2.26900903383534e-21!GO:0019866;organelle inner membrane;8.32282397259566e-21!GO:0006886;intracellular protein transport;1.05381288102379e-20!GO:0031982;vesicle;2.52280411300392e-20!GO:0005743;mitochondrial inner membrane;2.68250656545048e-20!GO:0044260;cellular macromolecule metabolic process;5.79589999435125e-20!GO:0031988;membrane-bound vesicle;6.70412359751142e-20!GO:0031410;cytoplasmic vesicle;1.22956090281224e-19!GO:0016023;cytoplasmic membrane-bound vesicle;2.47280350720233e-19!GO:0044267;cellular protein metabolic process;2.9294037233553e-19!GO:0044238;primary metabolic process;8.75176685008859e-19!GO:0016071;mRNA metabolic process;1.59228243648358e-18!GO:0006396;RNA processing;5.67516816641644e-18!GO:0006996;organelle organization and biogenesis;1.19987888053315e-17!GO:0003735;structural constituent of ribosome;1.59646149551512e-17!GO:0044237;cellular metabolic process;2.44097292457682e-17!GO:0008380;RNA splicing;3.88004468844909e-17!GO:0009058;biosynthetic process;9.32080821451971e-17!GO:0012505;endomembrane system;3.73578093184491e-16!GO:0044455;mitochondrial membrane part;4.25254927764194e-16!GO:0006397;mRNA processing;1.50616497192696e-15!GO:0005746;mitochondrial respiratory chain;1.89292690668464e-15!GO:0006412;translation;2.6496798863424e-15!GO:0043170;macromolecule metabolic process;2.66927445413104e-15!GO:0065003;macromolecular complex assembly;5.85630097769055e-15!GO:0006810;transport;7.86604191283977e-15!GO:0033279;ribosomal subunit;1.28422808688879e-14!GO:0000166;nucleotide binding;1.39564467932845e-14!GO:0006512;ubiquitin cycle;2.41067853089941e-14!GO:0043412;biopolymer modification;5.02649026907812e-14!GO:0050136;NADH dehydrogenase (quinone) activity;8.98217201616847e-14!GO:0003954;NADH dehydrogenase activity;8.98217201616847e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.98217201616847e-14!GO:0031981;nuclear lumen;1.20676835705897e-13!GO:0006464;protein modification process;1.20676835705897e-13!GO:0007399;nervous system development;1.2485787414245e-13!GO:0048770;pigment granule;1.25944221723154e-13!GO:0042470;melanosome;1.25944221723154e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.45303069947515e-13!GO:0022607;cellular component assembly;2.49310040087307e-13!GO:0007264;small GTPase mediated signal transduction;3.79823212685571e-13!GO:0043687;post-translational protein modification;4.38783888991418e-13!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.34847731360724e-13!GO:0044249;cellular biosynthetic process;5.56810493248344e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;5.82768843850054e-13!GO:0016462;pyrophosphatase activity;7.02248268300877e-13!GO:0016874;ligase activity;8.54376502838775e-13!GO:0045045;secretory pathway;1.17423163458851e-12!GO:0030135;coated vesicle;1.46473751914213e-12!GO:0009059;macromolecule biosynthetic process;1.60313049947642e-12!GO:0017111;nucleoside-triphosphatase activity;4.01246856138735e-12!GO:0031980;mitochondrial lumen;4.09330192414996e-12!GO:0005759;mitochondrial matrix;4.09330192414996e-12!GO:0005681;spliceosome;5.08360104304141e-12!GO:0030964;NADH dehydrogenase complex (quinone);5.57093408291665e-12!GO:0045271;respiratory chain complex I;5.57093408291665e-12!GO:0005747;mitochondrial respiratory chain complex I;5.57093408291665e-12!GO:0051179;localization;8.20134254567876e-12!GO:0042775;organelle ATP synthesis coupled electron transport;9.66885908282844e-12!GO:0042773;ATP synthesis coupled electron transport;9.66885908282844e-12!GO:0032553;ribonucleotide binding;9.66885908282844e-12!GO:0032555;purine ribonucleotide binding;9.66885908282844e-12!GO:0051234;establishment of localization;9.72939846998664e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.5085495686818e-11!GO:0043005;neuron projection;1.53866703710461e-11!GO:0005783;endoplasmic reticulum;4.11680071840341e-11!GO:0005634;nucleus;4.89164183947571e-11!GO:0019829;cation-transporting ATPase activity;5.57249112453609e-11!GO:0017076;purine nucleotide binding;6.28875715673251e-11!GO:0044431;Golgi apparatus part;7.22645292446342e-11!GO:0048193;Golgi vesicle transport;7.33782689819867e-11!GO:0006457;protein folding;1.26192281711825e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.81404488887256e-10!GO:0005768;endosome;3.03556539687458e-10!GO:0008092;cytoskeletal protein binding;3.11024151932501e-10!GO:0005830;cytosolic ribosome (sensu Eukaryota);3.72454462088033e-10!GO:0044445;cytosolic part;4.16859467902929e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.20705493613358e-10!GO:0006793;phosphorus metabolic process;4.95485080110702e-10!GO:0006796;phosphate metabolic process;4.95485080110702e-10!GO:0030695;GTPase regulator activity;6.52491537714261e-10!GO:0022613;ribonucleoprotein complex biogenesis and assembly;9.09229472145e-10!GO:0051186;cofactor metabolic process;1.01299556714946e-09!GO:0003924;GTPase activity;1.19411740207994e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.7026802869137e-09!GO:0005083;small GTPase regulator activity;3.70922648915766e-09!GO:0030136;clathrin-coated vesicle;3.85375666818572e-09!GO:0016044;membrane organization and biogenesis;4.15400252060638e-09!GO:0015935;small ribosomal subunit;4.91872355351651e-09!GO:0051082;unfolded protein binding;6.05384520295746e-09!GO:0006605;protein targeting;6.2369091972183e-09!GO:0015986;ATP synthesis coupled proton transport;7.83706654093949e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;7.83706654093949e-09!GO:0005654;nucleoplasm;1.1820397860335e-08!GO:0008639;small protein conjugating enzyme activity;1.20586073234185e-08!GO:0008134;transcription factor binding;1.32073432408192e-08!GO:0008565;protein transporter activity;1.81868277354056e-08!GO:0051603;proteolysis involved in cellular protein catabolic process;1.93093108945392e-08!GO:0004842;ubiquitin-protein ligase activity;2.23283957004782e-08!GO:0005525;GTP binding;2.30152365567012e-08!GO:0000502;proteasome complex (sensu Eukaryota);2.44191267722741e-08!GO:0022618;protein-RNA complex assembly;2.44349564516744e-08!GO:0019787;small conjugating protein ligase activity;2.74603072871527e-08!GO:0000139;Golgi membrane;2.77791140252651e-08!GO:0019941;modification-dependent protein catabolic process;2.97948758190608e-08!GO:0043632;modification-dependent macromolecule catabolic process;2.97948758190608e-08!GO:0006511;ubiquitin-dependent protein catabolic process;3.00857251601207e-08!GO:0044265;cellular macromolecule catabolic process;3.10835770106821e-08!GO:0032940;secretion by cell;3.43494539834022e-08!GO:0044257;cellular protein catabolic process;3.81971791121136e-08!GO:0007010;cytoskeleton organization and biogenesis;4.28549267995901e-08!GO:0043283;biopolymer metabolic process;4.71529051210655e-08!GO:0008135;translation factor activity, nucleic acid binding;5.929506031554e-08!GO:0044451;nucleoplasm part;7.33755352261964e-08!GO:0044248;cellular catabolic process;7.43968419860767e-08!GO:0046034;ATP metabolic process;1.24313828704098e-07!GO:0006732;coenzyme metabolic process;2.15690418633483e-07!GO:0016881;acid-amino acid ligase activity;2.25316462969159e-07!GO:0006461;protein complex assembly;2.31789461168782e-07!GO:0007242;intracellular signaling cascade;3.14479045953363e-07!GO:0044432;endoplasmic reticulum part;3.24330299408075e-07!GO:0030425;dendrite;3.43753294639921e-07!GO:0044440;endosomal part;3.48136685727141e-07!GO:0010008;endosome membrane;3.48136685727141e-07!GO:0009060;aerobic respiration;3.48136685727141e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.09553270022579e-07!GO:0006163;purine nucleotide metabolic process;4.20437328241032e-07!GO:0016310;phosphorylation;4.29310404204056e-07!GO:0009141;nucleoside triphosphate metabolic process;4.33044281840992e-07!GO:0043228;non-membrane-bound organelle;4.5621825565973e-07!GO:0043232;intracellular non-membrane-bound organelle;4.5621825565973e-07!GO:0006754;ATP biosynthetic process;4.77341950901311e-07!GO:0006753;nucleoside phosphate metabolic process;4.77341950901311e-07!GO:0015631;tubulin binding;5.27639628023054e-07!GO:0043285;biopolymer catabolic process;5.31044267823127e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.51466667312556e-07!GO:0009144;purine nucleoside triphosphate metabolic process;5.51466667312556e-07!GO:0019226;transmission of nerve impulse;5.57619566249741e-07!GO:0009150;purine ribonucleotide metabolic process;5.96309572312885e-07!GO:0005905;coated pit;6.39860647072325e-07!GO:0045333;cellular respiration;6.55793415674779e-07!GO:0009199;ribonucleoside triphosphate metabolic process;6.75797062064116e-07!GO:0030036;actin cytoskeleton organization and biogenesis;6.87707556506032e-07!GO:0030163;protein catabolic process;7.12181704915955e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.12181704915955e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.16680630869883e-07!GO:0032561;guanyl ribonucleotide binding;7.29973121246801e-07!GO:0019001;guanyl nucleotide binding;7.29973121246801e-07!GO:0032559;adenyl ribonucleotide binding;7.56277120921713e-07!GO:0015078;hydrogen ion transmembrane transporter activity;9.01584879228401e-07!GO:0048475;coated membrane;9.06415884495417e-07!GO:0030117;membrane coat;9.06415884495417e-07!GO:0005761;mitochondrial ribosome;9.33552742923611e-07!GO:0000313;organellar ribosome;9.33552742923611e-07!GO:0006164;purine nucleotide biosynthetic process;9.65690298182433e-07!GO:0015934;large ribosomal subunit;1.20058851477234e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.37674708377387e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.38596929095771e-06!GO:0048471;perinuclear region of cytoplasm;1.48860114029025e-06!GO:0009259;ribonucleotide metabolic process;1.57148071797887e-06!GO:0019717;synaptosome;1.72571604635319e-06!GO:0009057;macromolecule catabolic process;1.97706877142832e-06!GO:0008287;protein serine/threonine phosphatase complex;2.19234521236689e-06!GO:0009055;electron carrier activity;2.20364367158871e-06!GO:0005524;ATP binding;2.60806634553005e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.76077472858151e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.76077472858151e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.76077472858151e-06!GO:0000398;nuclear mRNA splicing, via spliceosome;3.43574222227034e-06!GO:0000375;RNA splicing, via transesterification reactions;3.43574222227034e-06!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.43574222227034e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.45880063937919e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.45880063937919e-06!GO:0008021;synaptic vesicle;3.59390775697084e-06!GO:0030029;actin filament-based process;3.62854746989371e-06!GO:0030554;adenyl nucleotide binding;3.72584698746749e-06!GO:0005789;endoplasmic reticulum membrane;4.39068096123385e-06!GO:0006446;regulation of translational initiation;4.39068096123385e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.53885916154833e-06!GO:0006913;nucleocytoplasmic transport;4.56812966241915e-06!GO:0009260;ribonucleotide biosynthetic process;5.7500330773023e-06!GO:0005770;late endosome;5.82050028869362e-06!GO:0006897;endocytosis;5.97407946838314e-06!GO:0010324;membrane invagination;5.97407946838314e-06!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.01122833433284e-06!GO:0051169;nuclear transport;6.76269562601606e-06!GO:0007265;Ras protein signal transduction;7.38214050767084e-06!GO:0022890;inorganic cation transmembrane transporter activity;9.02239678837448e-06!GO:0006099;tricarboxylic acid cycle;1.02642063666814e-05!GO:0046356;acetyl-CoA catabolic process;1.02642063666814e-05!GO:0051056;regulation of small GTPase mediated signal transduction;1.13530420720722e-05!GO:0031965;nuclear membrane;1.49631202670947e-05!GO:0005798;Golgi-associated vesicle;1.65604964383374e-05!GO:0045259;proton-transporting ATP synthase complex;1.68601636478269e-05!GO:0003743;translation initiation factor activity;1.83808273406903e-05!GO:0016604;nuclear body;1.87693339550444e-05!GO:0003779;actin binding;2.0638858513597e-05!GO:0005635;nuclear envelope;2.07819195725326e-05!GO:0005769;early endosome;2.09499091231232e-05!GO:0006413;translational initiation;2.22289838591872e-05!GO:0005773;vacuole;2.27624455749303e-05!GO:0019899;enzyme binding;2.3926986535187e-05!GO:0009109;coenzyme catabolic process;2.41407258050841e-05!GO:0031252;leading edge;2.50094832894213e-05!GO:0016607;nuclear speck;3.00977732473866e-05!GO:0030120;vesicle coat;3.85054691550278e-05!GO:0030662;coated vesicle membrane;3.85054691550278e-05!GO:0005874;microtubule;3.85054691550278e-05!GO:0000902;cell morphogenesis;3.92638501464914e-05!GO:0032989;cellular structure morphogenesis;3.92638501464914e-05!GO:0006084;acetyl-CoA metabolic process;3.98742419727391e-05!GO:0008654;phospholipid biosynthetic process;4.61086169440001e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;4.80298702070751e-05!GO:0015399;primary active transmembrane transporter activity;4.80298702070751e-05!GO:0032446;protein modification by small protein conjugation;4.89105356456076e-05!GO:0007268;synaptic transmission;5.17293164360362e-05!GO:0015630;microtubule cytoskeleton;5.42293106289769e-05!GO:0016567;protein ubiquitination;6.09238123472338e-05!GO:0003712;transcription cofactor activity;6.36492573426279e-05!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.67418322472465e-05!GO:0051187;cofactor catabolic process;7.39297236667516e-05!GO:0042623;ATPase activity, coupled;8.20877869493333e-05!GO:0048489;synaptic vesicle transport;8.40594308633543e-05!GO:0017038;protein import;9.00054658003555e-05!GO:0007269;neurotransmitter secretion;9.03324263412295e-05!GO:0016301;kinase activity;9.34482215724913e-05!GO:0005730;nucleolus;9.44750157114732e-05!GO:0046467;membrane lipid biosynthetic process;0.000113301440722812!GO:0016311;dephosphorylation;0.000124792761823719!GO:0009056;catabolic process;0.000125212539141051!GO:0051188;cofactor biosynthetic process;0.00016764528273594!GO:0043492;ATPase activity, coupled to movement of substances;0.00016764528273594!GO:0006650;glycerophospholipid metabolic process;0.000175287804755689!GO:0016887;ATPase activity;0.000176491021432038!GO:0008047;enzyme activator activity;0.000176491021432038!GO:0030133;transport vesicle;0.000183103504582269!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000186657978051826!GO:0006752;group transfer coenzyme metabolic process;0.000186657978051826!GO:0008017;microtubule binding;0.00020159912369803!GO:0048699;generation of neurons;0.000210089065125681!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000218789756678526!GO:0005085;guanyl-nucleotide exchange factor activity;0.000231477849585433!GO:0004721;phosphoprotein phosphatase activity;0.000255043369291143!GO:0045055;regulated secretory pathway;0.000255091959758731!GO:0022008;neurogenesis;0.000269700752352141!GO:0048523;negative regulation of cellular process;0.000315052821582819!GO:0010467;gene expression;0.000322531954718891!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000326107342642162!GO:0030118;clathrin coat;0.000327396675602275!GO:0051128;regulation of cellular component organization and biogenesis;0.000333286103580136!GO:0000323;lytic vacuole;0.000335029327325225!GO:0005764;lysosome;0.000335029327325225!GO:0006643;membrane lipid metabolic process;0.000340074333377247!GO:0005793;ER-Golgi intermediate compartment;0.000366064167111841!GO:0016740;transferase activity;0.000366286062251556!GO:0005774;vacuolar membrane;0.000382429077952723!GO:0005096;GTPase activator activity;0.000407789409664985!GO:0030182;neuron differentiation;0.000415578194954834!GO:0015980;energy derivation by oxidation of organic compounds;0.000437918259374592!GO:0006888;ER to Golgi vesicle-mediated transport;0.000437918259374592!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000437918259374592!GO:0016791;phosphoric monoester hydrolase activity;0.000440591628154734!GO:0050767;regulation of neurogenesis;0.000446693675042762!GO:0006470;protein amino acid dephosphorylation;0.00048152610778568!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000487618552464542!GO:0007019;microtubule depolymerization;0.000524868892843269!GO:0005741;mitochondrial outer membrane;0.000535437931323623!GO:0001505;regulation of neurotransmitter levels;0.00053757445313062!GO:0019902;phosphatase binding;0.000578889554153763!GO:0031902;late endosome membrane;0.000655442977221925!GO:0030027;lamellipodium;0.000727799523416561!GO:0030426;growth cone;0.000775126452328676!GO:0046578;regulation of Ras protein signal transduction;0.000792139730271675!GO:0030427;site of polarized growth;0.00082403242306219!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000856903082549131!GO:0045786;negative regulation of progression through cell cycle;0.000860760898046829!GO:0000151;ubiquitin ligase complex;0.000883253817544348!GO:0019208;phosphatase regulator activity;0.000954990640488569!GO:0016568;chromatin modification;0.00100083908476153!GO:0019867;outer membrane;0.00119799068263563!GO:0030424;axon;0.00119928511767151!GO:0009108;coenzyme biosynthetic process;0.00122003287497028!GO:0031968;organelle outer membrane;0.00122713218096693!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0012504810929527!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00126842806472949!GO:0030054;cell junction;0.00128700995057836!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00129707472578836!GO:0000245;spliceosome assembly;0.0013016003095607!GO:0006613;cotranslational protein targeting to membrane;0.00132664541512355!GO:0005516;calmodulin binding;0.00134614135821098!GO:0051246;regulation of protein metabolic process;0.00135737871991312!GO:0000159;protein phosphatase type 2A complex;0.00137398275190342!GO:0044453;nuclear membrane part;0.00137635172268348!GO:0004674;protein serine/threonine kinase activity;0.00140789025562039!GO:0016197;endosome transport;0.00148276395586171!GO:0030384;phosphoinositide metabolic process;0.00150083502674364!GO:0009966;regulation of signal transduction;0.00154306375412555!GO:0005765;lysosomal membrane;0.0015712507946748!GO:0016126;sterol biosynthetic process;0.00164175652484553!GO:0048666;neuron development;0.00168791102803597!GO:0003714;transcription corepressor activity;0.0017561636615483!GO:0005643;nuclear pore;0.00176085694625473!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00176085694625473!GO:0006323;DNA packaging;0.00177944850106484!GO:0031114;regulation of microtubule depolymerization;0.00180292964465161!GO:0007026;negative regulation of microtubule depolymerization;0.00180292964465161!GO:0044437;vacuolar part;0.00190010950487766!GO:0004722;protein serine/threonine phosphatase activity;0.00191702625651143!GO:0048487;beta-tubulin binding;0.00195495342177605!GO:0007272;ensheathment of neurons;0.00205316136266144!GO:0008366;axon ensheathment;0.00205316136266144!GO:0009117;nucleotide metabolic process;0.00206024676777722!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00206845457706299!GO:0008601;protein phosphatase type 2A regulator activity;0.00219914126508113!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00219914126508113!GO:0043209;myelin sheath;0.00219914126508113!GO:0004667;prostaglandin-D synthase activity;0.00219914126508113!GO:0050802;circadian sleep/wake cycle, sleep;0.00219914126508113!GO:0022410;circadian sleep/wake cycle process;0.00219914126508113!GO:0042749;regulation of circadian sleep/wake cycle;0.00219914126508113!GO:0012506;vesicle membrane;0.00221530359684936!GO:0048519;negative regulation of biological process;0.00253508331264801!GO:0008610;lipid biosynthetic process;0.00254025780439277!GO:0016564;transcription repressor activity;0.00255502054912493!GO:0007266;Rho protein signal transduction;0.00256254712517251!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00258408471219695!GO:0005869;dynactin complex;0.002601717095316!GO:0019888;protein phosphatase regulator activity;0.00262151810804577!GO:0046488;phosphatidylinositol metabolic process;0.00267545277737932!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00267545277737932!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00267545277737932!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00267545277737932!GO:0043623;cellular protein complex assembly;0.00277870278744429!GO:0006644;phospholipid metabolic process;0.00295609378167341!GO:0005875;microtubule associated complex;0.00297185916268841!GO:0006403;RNA localization;0.00297185916268841!GO:0000904;cellular morphogenesis during differentiation;0.00320098622392746!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00331480992146159!GO:0004812;aminoacyl-tRNA ligase activity;0.00331480992146159!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00331480992146159!GO:0050657;nucleic acid transport;0.00331480992146159!GO:0051236;establishment of RNA localization;0.00331480992146159!GO:0050658;RNA transport;0.00331480992146159!GO:0048667;neuron morphogenesis during differentiation;0.00331480992146159!GO:0048812;neurite morphogenesis;0.00331480992146159!GO:0005048;signal sequence binding;0.00338539698628954!GO:0003729;mRNA binding;0.00354038245615766!GO:0031175;neurite development;0.00354907503109276!GO:0030030;cell projection organization and biogenesis;0.00387633444509554!GO:0048858;cell projection morphogenesis;0.00387633444509554!GO:0032990;cell part morphogenesis;0.00387633444509554!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00387633444509554!GO:0055083;monovalent inorganic anion homeostasis;0.00387633444509554!GO:0055064;chloride ion homeostasis;0.00387633444509554!GO:0030644;cellular chloride ion homeostasis;0.00387633444509554!GO:0001508;regulation of action potential;0.00390201474185857!GO:0008154;actin polymerization and/or depolymerization;0.00390201474185857!GO:0044433;cytoplasmic vesicle part;0.00397536469941662!GO:0030532;small nuclear ribonucleoprotein complex;0.00401314788380266!GO:0046474;glycerophospholipid biosynthetic process;0.00403861834875121!GO:0032011;ARF protein signal transduction;0.0040639339607121!GO:0032012;regulation of ARF protein signal transduction;0.0040639339607121!GO:0006606;protein import into nucleus;0.00444009602916572!GO:0051170;nuclear import;0.00481800787692632!GO:0031072;heat shock protein binding;0.00481800787692632!GO:0065002;intracellular protein transport across a membrane;0.00481800787692632!GO:0048167;regulation of synaptic plasticity;0.00487995540641907!GO:0030660;Golgi-associated vesicle membrane;0.00487995540641907!GO:0006414;translational elongation;0.00491882518808022!GO:0019903;protein phosphatase binding;0.0050808697312481!GO:0005839;proteasome core complex (sensu Eukaryota);0.00527468672538235!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.00542148604504458!GO:0019198;transmembrane receptor protein phosphatase activity;0.00542148604504458!GO:0016050;vesicle organization and biogenesis;0.00544687500768418!GO:0003724;RNA helicase activity;0.00548922861137119!GO:0003697;single-stranded DNA binding;0.00550855813300165!GO:0005938;cell cortex;0.00568445799065062!GO:0051087;chaperone binding;0.00568445799065062!GO:0051920;peroxiredoxin activity;0.00574612452829638!GO:0043038;amino acid activation;0.00580562125028591!GO:0006418;tRNA aminoacylation for protein translation;0.00580562125028591!GO:0043039;tRNA aminoacylation;0.00580562125028591!GO:0019887;protein kinase regulator activity;0.00589862256703236!GO:0042578;phosphoric ester hydrolase activity;0.00589862256703236!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00599004978192467!GO:0051427;hormone receptor binding;0.00629043931378207!GO:0031901;early endosome membrane;0.00693303309662314!GO:0006891;intra-Golgi vesicle-mediated transport;0.00700561553268611!GO:0006695;cholesterol biosynthetic process;0.00712358821767327!GO:0030867;rough endoplasmic reticulum membrane;0.00726907316744599!GO:0051261;protein depolymerization;0.00740435840113242!GO:0004683;calmodulin-dependent protein kinase activity;0.00753218957435149!GO:0030132;clathrin coat of coated pit;0.00772342542721947!GO:0006892;post-Golgi vesicle-mediated transport;0.00776048670234609!GO:0044456;synapse part;0.00797201904814929!GO:0006665;sphingolipid metabolic process;0.00857189034519779!GO:0030658;transport vesicle membrane;0.0088426688472289!GO:0003746;translation elongation factor activity;0.00905820668256384!GO:0008026;ATP-dependent helicase activity;0.00908745171358308!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00919658390320815!GO:0008250;oligosaccharyl transferase complex;0.00942498474561326!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00953547119193947!GO:0051168;nuclear export;0.00993686617921931!GO:0050811;GABA receptor binding;0.0101265076221103!GO:0000314;organellar small ribosomal subunit;0.010208245937686!GO:0005763;mitochondrial small ribosomal subunit;0.010208245937686!GO:0050803;regulation of synapse structure and activity;0.0103148507502037!GO:0009165;nucleotide biosynthetic process;0.0103424177257135!GO:0035257;nuclear hormone receptor binding;0.0108579165862548!GO:0007017;microtubule-based process;0.0109071964523868!GO:0001578;microtubule bundle formation;0.0109799874859965!GO:0006904;vesicle docking during exocytosis;0.0110012987754611!GO:0030659;cytoplasmic vesicle membrane;0.0112202709739869!GO:0043566;structure-specific DNA binding;0.0114604659270773!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0114916189023006!GO:0007409;axonogenesis;0.012041909222226!GO:0005092;GDP-dissociation inhibitor activity;0.0132400043173534!GO:0043025;cell soma;0.0135482058637518!GO:0006612;protein targeting to membrane;0.0135513567240973!GO:0030742;GTP-dependent protein binding;0.0136193057767859!GO:0022406;membrane docking;0.0137758141495034!GO:0048278;vesicle docking;0.0137758141495034!GO:0019904;protein domain specific binding;0.0137771271826087!GO:0006916;anti-apoptosis;0.0138906040724125!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0143416850159279!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0143416850159279!GO:0005791;rough endoplasmic reticulum;0.0146304954737645!GO:0006818;hydrogen transport;0.0153559858867139!GO:0030041;actin filament polymerization;0.0154126898090482!GO:0048468;cell development;0.0155045934416771!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0157480315721602!GO:0042995;cell projection;0.0158520482260398!GO:0031301;integral to organelle membrane;0.0161608954748802!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.0164508097154019!GO:0005762;mitochondrial large ribosomal subunit;0.0165026822540793!GO:0000315;organellar large ribosomal subunit;0.0165026822540793!GO:0042552;myelination;0.0166517378448289!GO:0003713;transcription coactivator activity;0.0167984522133547!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0169366686931925!GO:0030125;clathrin vesicle coat;0.0171443059513054!GO:0030665;clathrin coated vesicle membrane;0.0171443059513054!GO:0042254;ribosome biogenesis and assembly;0.0178418014684914!GO:0000287;magnesium ion binding;0.0178971707133174!GO:0019207;kinase regulator activity;0.017920514785925!GO:0004298;threonine endopeptidase activity;0.0180391889196344!GO:0050839;cell adhesion molecule binding;0.0181721542059429!GO:0008139;nuclear localization sequence binding;0.0186548230558276!GO:0016079;synaptic vesicle exocytosis;0.0187282202564369!GO:0043681;protein import into mitochondrion;0.018728364689403!GO:0006607;NLS-bearing substrate import into nucleus;0.018728364689403!GO:0030137;COPI-coated vesicle;0.0187422076102519!GO:0008361;regulation of cell size;0.0187686465239217!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0188321875294079!GO:0019894;kinesin binding;0.0190490720798022!GO:0051540;metal cluster binding;0.0192194382701929!GO:0051536;iron-sulfur cluster binding;0.0192194382701929!GO:0043021;ribonucleoprotein binding;0.0201072015977101!GO:0006595;polyamine metabolic process;0.020455147119148!GO:0031109;microtubule polymerization or depolymerization;0.0207577631538601!GO:0008186;RNA-dependent ATPase activity;0.0210741200001723!GO:0005099;Ras GTPase activator activity;0.0214610969887463!GO:0015992;proton transport;0.0218753734019718!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0224085579954462!GO:0051028;mRNA transport;0.0224608035982063!GO:0046489;phosphoinositide biosynthetic process;0.0237600282953804!GO:0035035;histone acetyltransferase binding;0.0237600282953804!GO:0008088;axon cargo transport;0.0241243957394902!GO:0044262;cellular carbohydrate metabolic process;0.024497180093434!GO:0044448;cell cortex part;0.0251073851883648!GO:0015629;actin cytoskeleton;0.0255975643517601!GO:0050435;beta-amyloid metabolic process;0.0258357399671196!GO:0007611;learning and/or memory;0.025983605424355!GO:0008286;insulin receptor signaling pathway;0.0262482563558271!GO:0043087;regulation of GTPase activity;0.0265318237836729!GO:0007005;mitochondrion organization and biogenesis;0.0266306071127511!GO:0006091;generation of precursor metabolites and energy;0.0266348661771553!GO:0033116;ER-Golgi intermediate compartment membrane;0.0266615781941872!GO:0005868;cytoplasmic dynein complex;0.026892171975361!GO:0033673;negative regulation of kinase activity;0.0270293103594871!GO:0006469;negative regulation of protein kinase activity;0.0270293103594871!GO:0016049;cell growth;0.0276445542948436!GO:0006672;ceramide metabolic process;0.028467250326051!GO:0005885;Arp2/3 protein complex;0.0291325016563332!GO:0043407;negative regulation of MAP kinase activity;0.0292824717472777!GO:0030176;integral to endoplasmic reticulum membrane;0.0292824717472777!GO:0004672;protein kinase activity;0.0300251460932701!GO:0051287;NAD binding;0.0309367204548216!GO:0007033;vacuole organization and biogenesis;0.0316995380992384!GO:0006402;mRNA catabolic process;0.0325281805177802!GO:0030258;lipid modification;0.0325613607591019!GO:0004386;helicase activity;0.0325613607591019!GO:0046519;sphingoid metabolic process;0.032582715257205!GO:0004680;casein kinase activity;0.0326874818852779!GO:0042670;retinal cone cell differentiation;0.0327214068984127!GO:0051281;positive regulation of release of sequestered calcium ion into cytosol;0.0327214068984127!GO:0046549;retinal cone cell development;0.0327214068984127!GO:0004576;oligosaccharyl transferase activity;0.0327214068984127!GO:0001726;ruffle;0.0327616348015868!GO:0009892;negative regulation of metabolic process;0.0327998382877152!GO:0008526;phosphatidylinositol transporter activity;0.0335065527723961!GO:0042802;identical protein binding;0.0336107150556532!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0341933137686302!GO:0030119;AP-type membrane coat adaptor complex;0.0344836431703114!GO:0043284;biopolymer biosynthetic process;0.0344836431703114!GO:0016579;protein deubiquitination;0.0346588738137632!GO:0019911;structural constituent of myelin sheath;0.0359751872870265!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0362299239163376!GO:0015002;heme-copper terminal oxidase activity;0.0362299239163376!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0362299239163376!GO:0004129;cytochrome-c oxidase activity;0.0362299239163376!GO:0006887;exocytosis;0.0365836885961324!GO:0031371;ubiquitin conjugating enzyme complex;0.0382064342408735!GO:0008219;cell death;0.0382064342408735!GO:0016265;death;0.0382064342408735!GO:0031124;mRNA 3'-end processing;0.0382383997374789!GO:0030131;clathrin adaptor complex;0.038510321447009!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0391675256552816!GO:0000096;sulfur amino acid metabolic process;0.0392390148963152!GO:0007006;mitochondrial membrane organization and biogenesis;0.0410714325615021!GO:0035258;steroid hormone receptor binding;0.0410821487841874!GO:0001666;response to hypoxia;0.0412512329823205!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0417132021804874!GO:0006366;transcription from RNA polymerase II promoter;0.0419109793662869!GO:0030641;cellular hydrogen ion homeostasis;0.0421355641484317!GO:0051726;regulation of cell cycle;0.0421355641484317!GO:0030911;TPR domain binding;0.0422012373879917!GO:0005952;cAMP-dependent protein kinase complex;0.0424606620200925!GO:0006333;chromatin assembly or disassembly;0.0431264639563485!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0431264639563485!GO:0051348;negative regulation of transferase activity;0.0431317974266794!GO:0048499;synaptic vesicle membrane organization and biogenesis;0.043247494577473!GO:0030285;integral to synaptic vesicle membrane;0.043247494577473!GO:0007158;neuron adhesion;0.0433411572221923!GO:0046930;pore complex;0.0437188671189625!GO:0006661;phosphatidylinositol biosynthetic process;0.0438407640055378!GO:0048500;signal recognition particle;0.0444868252288697!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0444868252288697!GO:0008022;protein C-terminus binding;0.0444868252288697!GO:0043069;negative regulation of programmed cell death;0.0457862298289903!GO:0051539;4 iron, 4 sulfur cluster binding;0.0461064761314531!GO:0004004;ATP-dependent RNA helicase activity;0.0461064761314531!GO:0050749;apolipoprotein E receptor binding;0.0473520081553482!GO:0005078;MAP-kinase scaffold activity;0.047827004094705!GO:0007034;vacuolar transport;0.0479467789876842!GO:0006364;rRNA processing;0.048046173788378!GO:0045161;neuronal ion channel clustering;0.0480639839593595!GO:0033130;acetylcholine receptor binding;0.0481931855883151!GO:0030145;manganese ion binding;0.0481931855883151!GO:0006611;protein export from nucleus;0.0482034862428297!GO:0005100;Rho GTPase activator activity;0.0485259491827687!GO:0031110;regulation of microtubule polymerization or depolymerization;0.0490187240983639!GO:0043254;regulation of protein complex assembly;0.0492066279225231!GO:0045296;cadherin binding;0.0499925938681869
+|sample_id=10031
+|sample_note=
+|sample_sex=mixed
+|sample_species=Human (Homo sapiens)
+|sample_strain=
+|sample_tissue=temporal lobe
+|top_motifs=REST:4.69722810015;NHLH1,2:4.19796241528;EGR1..3:4.19353810719;ZBTB6:3.83005278848;ZFP161:3.65594868544;PAX5:3.63576764985;AHR_ARNT_ARNT2:3.59293325646;MTF1:3.57525170165;TFAP2B:3.56176986893;MYFfamily:3.5438180431;MTE{core}:3.50619096296;MED-1{core}:3.4676861219;RREB1:3.3536656001;PRRX1,2:3.27125189243;HIC1:3.21883796626;ATF2:3.16873912055;RFX1:3.10907251847;GTF2I:3.05746326305;SMAD1..7,9:2.6983572827;MZF1:2.67416415596;PATZ1:2.62527100237;LMO2:2.61495388813;CUX2:2.49701723257;JUN:2.44489373097;EBF1:2.39079808396;BREu{core}:2.3772512301;FOXM1:2.35118252419;SOX5:2.35093308967;PRDM1:2.33263183758;MAZ:2.28982739897;ZNF423:2.28018756865;SOX{8,9,10}:2.24861298362;GCM1,2:2.21349011543;SOX2:2.1853510087;DBP:2.13749914913;NFIX:2.01700284951;GTF2A1,2:2.01148480779;TFDP1:1.97329939156;RFX2..5_RFXANK_RFXAP:1.92650573673;OCT4_SOX2{dimer}:1.92455965593;SOX17:1.90062607689;PAX6:1.88737170737;HOXA9_MEIS1:1.86505557528;ESRRA:1.82664883544;NKX2-3_NKX2-5:1.80904007168;GFI1B:1.80160706622;POU5F1:1.79730387569;MYOD1:1.79692534449;NKX3-2:1.77498170107;NANOG:1.75751832925;EP300:1.73551656122;MAFB:1.72776445628;LEF1_TCF7_TCF7L1,2:1.67340886319;TGIF1:1.66293823711;POU6F1:1.62756864409;ZNF238:1.59210716006;TFAP2{A,C}:1.50604625061;KLF4:1.48784244273;SP1:1.47711590993;NRF1:1.38980682126;XBP1:1.30517037649;RBPJ:1.27474287376;RORA:1.2623892904;ARID5B:1.23364135203;NFIL3:1.21689499993;HOX{A4,D4}:1.19957099449;HAND1,2:1.15911525065;XCPE1{core}:1.11795878033;ZEB1:1.03263709142;FOXQ1:1.02934712354;SREBF1,2:0.994830707339;FOX{F1,F2,J1}:0.954618363581;HMX1:0.924892644236;GATA4:0.895758825352;POU3F1..4:0.844612422449;MEF2{A,B,C,D}:0.836089808271;ZNF143:0.804843286833;ZIC1..3:0.779827390022;TLX1..3_NFIC{dimer}:0.659023976349;CRX:0.655760317044;bHLH_family:0.631151140564;TBX4,5:0.605600473687;HMGA1,2:0.60365293858;CDC5L:0.589059920002;CREB1:0.586897028248;YY1:0.555593396732;SPZ1:0.536762738743;T:0.526056673213;HBP1_HMGB_SSRP1_UBTF:0.519928037472;ZNF148:0.487480663152;ADNP_IRX_SIX_ZHX:0.47032848609;TLX2:0.403132198028;VSX1,2:0.391399284758;GZF1:0.383728251194;NR5A1,2:0.377993479714;AR:0.366076224816;HOX{A6,A7,B6,B7}:0.33570537915;ATF4:0.306780384193;ESR1:0.303564694493;STAT1,3:0.247897158182;PBX1:0.22072642643;ATF5_CREB3:0.220242766173;FOX{D1,D2}:0.219522193044;TFAP4:0.218817206339;GFI1:0.212541008997;PAX2:0.205659783893;IKZF1:0.0605631505007;ONECUT1,2:0.0437168912086;ZNF384:0.028573767653;NKX6-1,2:0.0204504126676;TFCP2:-0.01575267985;MYBL2:-0.0253586333693;NFY{A,B,C}:-0.0291899003158;NFE2L2:-0.037637117785;SNAI1..3:-0.0535532919323;NR3C1:-0.0985939372501;FOXP1:-0.122861468274;PAX1,9:-0.124190724679;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.138555912581;NFE2L1:-0.166369380859;LHX3,4:-0.227933263175;FOXP3:-0.230622891877;PAX3,7:-0.230943285754;FOXN1:-0.23269998027;BPTF:-0.285526008215;IKZF2:-0.337301092062;NANOG{mouse}:-0.339312171044;IRF7:-0.344432266628;FOXL1:-0.39973637236;TOPORS:-0.413031328609;NFE2:-0.432884389404;NR1H4:-0.439111263043;GLI1..3:-0.451647787537;RXR{A,B,G}:-0.456673963036;PDX1:-0.457110772992;UFEwm:-0.464217482302;FOXA2:-0.500152850731;SPI1:-0.508545605095;ALX1:-0.576476994124;CEBPA,B_DDIT3:-0.614065919369;TEF:-0.650412240045;GATA6:-0.660542309646;STAT2,4,6:-0.670659233257;ATF6:-0.687789923248;HNF1A:-0.697180273192;SPIB:-0.730350640861;TP53:-0.731957595163;HSF1,2:-0.745769763427;ETS1,2:-0.762071882589;IRF1,2:-0.777716010323;TAL1_TCF{3,4,12}:-0.800905685214;NFATC1..3:-0.826132577139;FOSL2:-0.85043051213;BACH2:-0.874149905971;HNF4A_NR2F1,2:-0.882234934234;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.918381304922;FOXD3:-0.954337401018;FOS_FOS{B,L1}_JUN{B,D}:-0.955401203761;TEAD1:-0.966540143316;TBP:-0.974400228795;FOXO1,3,4:-0.979064932598;FOX{I1,J2}:-0.981086338212;DMAP1_NCOR{1,2}_SMARC:-0.989209966636;RUNX1..3:-0.994261141799;HES1:-1.02600594063;PPARG:-1.04889832205;PAX8:-1.08881736362;PAX4:-1.09368698956;SRF:-1.10989102509;POU1F1:-1.12679203265;HLF:-1.16533189916;NFKB1_REL_RELA:-1.19633432938;HIF1A:-1.22996409789;RXRA_VDR{dimer}:-1.30536977313;POU2F1..3:-1.32576580933;E2F1..5:-1.36163202061;ELK1,4_GABP{A,B1}:-1.37083869717;ALX4:-1.46565062892;EN1,2:-1.515524428;NKX2-2,8:-1.52472140604;MYB:-1.6698809008;STAT5{A,B}:-1.68443811557;PITX1..3:-1.81264863722;ELF1,2,4:-1.93757021041;NKX3-1:-2.24800141733;EVI1:-2.42381223707;HOX{A5,B5}:-2.51068451665;NR6A1:-2.66313911109;ZBTB16:-2.74052584398;NKX2-1,4:-2.80640123207;CDX1,2,4:-3.11410327719;AIRE:-3.18306501584
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10031-101E4;search_select_hide=table117:FF:10031-101E4
 }}

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FF:10031-101E4: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 12:15, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0