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{{f5samples
{{f5samples
|id=FF:10150-102I6
|DRA_sample_Accession=CAGE@SAMD00005747
|name=medial temporal gyrus, adult, donor10252
|HumanCAGEScanFiles=NCig10023;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/medial%2520frontal%2520gyrus%252c%2520adult%252c%2520donor10252.NCig10023.10150-102I6.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/medial%2520frontal%2520gyrus%252c%2520adult%252c%2520donor10252.NCig10023.10150-102I6.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/medial%2520frontal%2520gyrus%252c%2520adult%252c%2520donor10252.NCig10023.10150-102I6.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/medial%2520frontal%2520gyrus%252c%2520adult%252c%2520donor10252.NCig10023.10150-102I6.hg19.GCTATA.pairs.bed.gz
|sample_id=10150
|accession_numbers=CAGE;DRX008683;DRR009555;DRZ000980;DRZ002365;DRZ012330;DRZ013715
|rna_tube_id=102I6
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000955,UBERON:0000200,UBERON:0001870,UBERON:0000956,UBERON:0002702,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950
|rna_box=102
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
|rna_position=I6
|sample_cell_lot=NA
|sample_cell_catalog=NA
|sample_company=
|rna_lot_number=
|rna_catalog_number=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=medial frontal gyrus
|sample_donor(cell lot)=donor: 10252
|sample_sex=female
|sample_age=76
|sample_ethnicity=
|rna_rin=
|rna_od260/230=2.24
|rna_od260/280=2.04
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_cell_line=
|sample_collaboration=Peter Heutink
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=48.03825
|rna_concentration=0.64051
|sample_note=
|profile_hcage=CNhs12310,LSID913,release011,COMPLETED
|profile_cagescan=NCig10023,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000073,UBERON:0000153,UBERON:0000200,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0000956,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001869,UBERON:0001871,UBERON:0001890,UBERON:0001893,UBERON:0001950,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0002616,UBERON:0002619,UBERON:0002771,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000002,FF:0000001
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.43!269.29!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.25!176.27!OLIG1;;chr9:77112244..77112262,+!p1@RORB!2.17!162.75!RORB;;chr22:38380543..38380569,-!p1@SOX10!2.15!138.96!SOX10;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.08!118.81!PEG3;;chr3:181429704..181429722,+!p1@SOX2!1.96!90.26!SOX2;;chr17:53342311..53342400,+!p1@HLF!1.94!98.78!HLF;;chr4:81118647..81118666,+!p1@PRDM8!1.90!101.78!PRDM8;;chr10:64134120..64134183,+!p1@ZNF365!1.86!85.88!ZNF365;;chr11:61520075..61520136,+!p1@C11orf9!1.82!133.58!C11orf9;;chr17:37764128..37764258,-!p1@NEUROD2!1.82!64.97!NEUROD2;;chr9:114287433..114287513,+!p1@ZNF483!1.79!150.98!ZNF483;;chr14:29235961..29236008,+!p1@FOXG1!1.79!60.34!FOXG1;;chr2:162272785..162272836,+!p1@TBR1!1.74!53.96!TBR1;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.73!53.21!SMARCE1;;chr15:80733570..80733659,+!p2@ARNT2!1.73!52.83!ARNT2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.73!52.71!POU3F3;;chr8:53322304..53322340,-!p1@ST18!1.72!51.08!ST18;;chr12:26277817..26277863,-!p2@BHLHE41!1.68!63.22!BHLHE41;;chr21:34398234..34398250,+!p1@OLIG2!1.68!46.70!OLIG2;;chr11:113930425..113930471,+!p1@ZBTB16!1.65!62.09!ZBTB16;;chr2:2334997..2335053,-!p1@MYT1L!1.65!43.57!MYT1L;;chr12:106976678..106976708,+!p2@RFX4!1.65!43.32!RFX4;;chr2:145277882..145277967,-!p3@ZEB2!1.63!71.23!ZEB2;;chr5:88178983..88179012,-!p1@MEF2C!1.60!285.44!MEF2C;;chr19:46801639..46801699,+!p1@HIF3A!1.60!38.93!HIF3A;;chr2:166326200..166326216,+!p1@CSRNP3!1.59!55.33!CSRNP3;;chr2:95963052..95963106,+!p1@KCNIP3!1.59!38.06!KCNIP3;;chr22:41763452..41763466,+!p2@TEF!1.59!37.81!TEF;;chrX:25034067..25034088,-!p1@ARX!1.59!37.81!ARX;;chr8:40755333..40755352,-!p1@ZMAT4!1.58!37.43!ZMAT4;;chr21:34442540..34442560,+!p2@OLIG1!1.57!36.43!OLIG1;;chr19:13135582..13135600,+!p3@NFIX!1.56!35.05!NFIX;;chr15:80735246..80735321,+!p3@ARNT2!1.56!34.93!ARNT2;;chr18:53070846..53070902,-!p6@TCF4!1.54!33.80!TCF4;;chr10:134599649..134599653,-!p1@NKX6-2!1.54!33.68!NKX6-2;;chr12:54779511..54779577,-!p5@ZNF385A!1.51!31.30!ZNF385A;;chr16:1031762..1031781,+!p1@SOX8!1.49!29.92!SOX8;;chr11:31832862..31832884,-!p2@PAX6!1.49!29.67!PAX6;;chr19:13135386..13135435,+!p4@NFIX!1.48!28.92!NFIX;;chr10:119302232..119302265,+!p1@EMX2!1.47!28.67!EMX2;;chr2:60781201..60781258,-!p3@BCL11A!1.45!27.42!BCL11A;;chr4:57547454..57547469,-!p1@HOPX!1.44!26.67!HOPX;;chr15:80696703..80696754,+!p1@ARNT2!1.43!34.43!ARNT2;;chr14:29236269..29236285,+!p3@FOXG1!1.42!25.54!FOXG1;;chr9:126774018..126774055,+!p1@LHX2!1.42!25.04!LHX2;;chr12:26277956..26277980,-!p1@BHLHE41!1.41!87.01!BHLHE41;;chr15:31658288..31658338,+!p4@KLF13!1.41!24.54!KLF13;;chr10:48355030..48355090,+!p1@ZNF488!1.40!31.17!ZNF488;;chr5:92920256..92920282,+!p7@NR2F1!1.40!29.42!NR2F1;;chr3:181429741..181429767,+!p2@SOX2!1.40!24.16!SOX2;;chr17:7492684..7492778,-!p2@SOX15!1.39!49.20!SOX15;;chr8:53322347..53322378,-!p2@ST18!1.39!23.41!ST18;;chr12:106976774..106976788,+!p1@RFX4!1.36!22.16!RFX4;;chr14:29234581..29234601,+!p2@FOXG1!1.36!21.91!FOXG1;;chr11:8102846..8102892,+!p1@TUB!1.35!29.80!TUB;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.34!21.03!ZBED1;;chr8:145560111..145560165,-!p2@SCRT1!1.33!20.41!SCRT1;;chr3:126076242..126076257,-!p1@KLF15!1.32!24.41!KLF15;;chr6:143266185..143266238,-!p2@HIVEP2!1.30!25.91!HIVEP2;;chr14:33403881..33403924,+!p1@NPAS3!1.30!19.15!NPAS3;;chr7:31380292..31380351,-!p1@NEUROD6!1.29!18.53!NEUROD6;;chr11:125034640..125034655,+!p1@PKNOX2!1.29!18.28!PKNOX2;;chr17:70117153..70117174,+!p1@SOX9!1.28!182.40!SOX9;;chr1:61548069..61548102,+!p3@NFIA!1.27!42.19!NFIA;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.27!17.65!POU3F3;;chr6:126112039..126112062,+!p8@NCOA7!1.26!20.66!NCOA7;;chr8:145560371..145560449,-!p1@SCRT1!1.26!17.15!SCRT1;;chr9:77112225..77112238,+!p2@RORB!1.26!17.03!RORB;;chr1:214161272..214161322,+!p1@PROX1!1.25!23.66!PROX1;;chr11:47400078..47400106,-!p1@SPI1!1.25!16.65!SPI1;;chr6:15401104..15401166,+!p5@JARID2!1.24!16.27!JARID2;;chr5:88179017..88179046,-!p2@MEF2C!1.23!62.97!MEF2C;;chr3:24536253..24536328,-!p1@THRB!1.22!29.17!THRB;;chr6:19837592..19837621,+!p1@ID4!1.21!91.39!ID4;;chr14:58798013..58798071,+!p2@ARID4A!1.21!15.40!ARID4A;;chr19:46800289..46800327,+!p2@HIF3A!1.21!15.15!HIF3A;;chr19:7580549..7580596,+!p3@ZNF358!1.21!15.15!ZNF358;;chr2:200323414..200323455,-!p1@SATB2!1.20!31.30!SATB2;;chr3:141105705..141105770,+!p4@ZBTB38!1.20!18.15!ZBTB38;;chr2:162272889..162272915,+!p2@TBR1!1.20!14.77!TBR1;;chr11:113930401..113930422,+!p3@ZBTB16!1.20!14.77!ZBTB16;;chr16:85932760..85932775,+!p1@IRF8!1.19!14.40!IRF8;;chr19:57352109..57352153,-!p2@ZIM2!1.19!14.40!ZIM2;;chrX:85969626..85969664,+!p1@DACH2!1.18!14.27!DACH2;;chr14:33403648..33403710,+!p3@NPAS3!1.18!14.15!NPAS3;;chr2:60780607..60780624,-!p2@BCL11A!1.17!41.69!BCL11A;;chr12:54785074..54785122,-!p2@ZNF385A!1.16!20.91!ZNF385A;;chr19:38085768..38085821,+!p1@ZNF540!1.16!20.28!ZNF540;;chr1:244219775..244219893,+!p2@ZNF238!1.16!18.40!ZNF238;;chr2:162272716..162272753,+!p3@TBR1!1.16!13.52!TBR1;;chr6:28321971..28321995,-!p1@ZNF323!1.16!13.40!ZNF323;;chr17:38219209..38219230,+!p1@THRA!1.14!165.63!THRA;;chr9:3525867..3525902,-!p3@RFX3!1.14!44.32!RFX3;;chr11:113930291..113930339,+!p2@ZBTB16!1.14!21.16!ZBTB16;;chr12:103351444..103351461,+!p1@ASCL1!1.14!12.89!ASCL1;;chr7:63505799..63505904,+!p1@ZNF727!1.14!12.89!ZNF727;;chr19:38720294..38720348,-!p1@DPF1!1.13!15.65!DPF1;;chr4:57522166..57522260,-!p2@HOPX!1.13!14.27!HOPX;;chr16:67198633..67198671,+!p1@HSF4!1.13!12.52!HSF4;;chr15:31631789..31631811,+!p13@KLF13!1.13!12.39!KLF13;;chr1:151032860..151032918,+!p1@MLLT11!1.12!143.47!MLLT11;;chr3:141105235..141105307,+!p7@ZBTB38!1.12!12.14!ZBTB38;;chr9:3525910..3525955,-!p4@RFX3!1.11!35.43!RFX3;;chr20:42544782..42544828,+!p4@TOX2!1.11!12.02!TOX2;;chr12:24102576..24102623,-!p2@SOX5!1.11!11.77!SOX5;;chr2:180726291..180726311,-!p1@ZNF385B!1.11!11.77!ZNF385B;;chr11:125034605..125034636,+!p2@PKNOX2!1.10!11.64!PKNOX2;;chr2:2328299..2328363,-!p3@MYT1L!1.10!11.52!MYT1L;;chr7:73038839..73038862,-!p1@MLXIPL!1.10!11.52!MLXIPL;;chr16:79634624..79634642,-!p1@MAF!1.09!44.57!MAF;;chrX:118739835..118739862,-!p1@NKRF!1.09!12.39!NKRF;;chr21:39870339..39870443,-!p1@ERG!1.09!11.39!ERG;;chr3:187463179..187463201,-!p2@BCL6!1.08!45.44!BCL6;;chr14:33408072..33408114,+!p2@NPAS3!1.08!13.02!NPAS3;;chr3:24536332..24536358,-!p2@THRB!1.08!11.14!THRB;;chr9:126773880..126773895,+!p2@LHX2!1.08!11.02!LHX2;;chr2:166428839..166428859,+!p2@CSRNP3!1.08!10.89!CSRNP3;;chr8:30890810..30890880,-!p1@PURG!1.08!10.89!PURG;;chr17:38256822..38256851,-!p1@NR1D1!1.07!85.76!NR1D1;;chr18:52989031..52989079,-!p2@TCF4!1.07!25.29!TCF4;;chr3:18466660..18466676,-!p5@SATB1!1.07!12.52!SATB1;;chr5:71803177..71803255,-!p1@ZNF366!1.07!10.77!ZNF366;;chr1:40105299..40105326,-!p1@HEYL!1.07!10.64!HEYL;;chr15:61521417..61521460,-!p2@RORA!1.06!23.91!RORA;;chr7:64023410..64023428,-!p2@ZNF680!1.06!16.78!ZNF680;;chr16:51185318..51185348,-!p2@SALL1!1.06!10.52!SALL1;;chr9:126774058..126774081,+!p3@LHX2!1.06!10.39!LHX2;;chr4:57547751..57547764,-!p6@HOPX!1.05!10.27!HOPX;;chr3:114819124..114819200,-!p3@ZBTB20!1.04!23.54!ZBTB20;;chr5:178368186..178368238,+!p1@ZNF454!1.04!18.15!ZNF454;;chr12:24715376..24715432,-!p1@SOX5!1.04!12.77!SOX5;;chr5:88179518..88179569,-!p5@MEF2C!1.03!13.02!MEF2C;;chr16:67197654..67197716,+!p3@HSF4!1.03!9.76!HSF4;;chr2:95963120..95963136,+!p2@KCNIP3!1.03!9.76!KCNIP3;;chr2:2335109..2335134,-!p2@MYT1L!1.03!9.64!MYT1L;;chr3:114343039..114343085,-!p8@ZBTB20!1.03!9.64!ZBTB20;;chr8:93074803..93074845,-!p1@RUNX1T1!1.03!9.64!RUNX1T1;;chr1:8585945..8586056,-!p3@RERE!1.02!32.42!RERE;;chrX:118739782..118739829,-!p2@NKRF!1.02!9.51!NKRF;;chr16:67198683..67198698,+!p2@HSF4!1.02!9.51!HSF4;;chr2:2330039..2330072,-!p6@MYT1L!1.02!9.39!MYT1L;;chr11:31832807..31832823,-!p4@PAX6!1.02!9.39!PAX6;;chr3:18466787..18466839,-!p1@SATB1!1.01!41.81!SATB1;;chrX:70315688..70315709,+!p1@FOXO4!1.01!21.78!FOXO4;;chr13:46549911..46549956,-!p3@ZC3H13!1.01!13.40!ZC3H13;;chr12:26277929..26277955,-!p3@BHLHE41!1.01!13.15!BHLHE41;;chr20:51588873..51588953,+!p1@TSHZ2!1.01!12.27!TSHZ2;;chr11:31832658..31832681,-!p1@PAX6!1.01!9.26!PAX6;;chr19:57183114..57183145,-!p1@ZNF835!1.00!10.14!ZNF835;;chr10:31610110..31610159,+!p2@ZEB1!1.00!9.01!ZEB1;;chr12:106976656..106976672,+!p4@RFX4!1.00!9.01!RFX4;;chr19:30863271..30863338,+!p1@ZNF536!1.00!9.01!ZNF536;;chr9:14314946..14314983,-!p8@NFIB!1.00!9.01!NFIB;;chr13:100634031..100634045,+!p1@ZIC2!1.00!8.89!ZIC2;;chr3:126076264..126076305,-!p2@KLF15!0.99!12.39!KLF15;;chr20:62680984..62680999,-!p1@SOX18!0.99!11.77!SOX18;;chr12:125003087..125003141,-!p4@NCOR2!0.99!11.27!NCOR2;;chr19:13135566..13135577,+!p9@NFIX!0.99!8.76!NFIX;;chr19:53636125..53636178,-!p1@ZNF415!0.98!25.04!ZNF415;;chr16:86544113..86544145,+!p1@FOXF1!0.98!10.64!FOXF1;;chr8:10588010..10588030,-!p1@SOX7!0.97!8.26!SOX7;;chr2:214016314..214016343,-!p2@IKZF2!0.96!14.02!IKZF2;;chr8:60031682..60031710,-!p2@TOX!0.96!13.27!TOX;;chr2:162273241..162273253,+!p4@TBR1!0.96!8.14!TBR1;;chr6:126112074..126112144,+!p1@NCOA7!0.95!108.67!NCOA7;;chr20:3388541..3388575,-!p2@C20orf194!0.95!31.92!C20orf194;;chr16:79634595..79634620,-!p2@MAF!0.95!14.77!MAF;;chr2:100721281..100721307,-!p5@AFF3!0.95!8.01!AFF3;;chr13:100623375..100623425,-!p1@ZIC5!0.95!8.01!ZIC5;;chr5:138609489..138609542,+!p8@MATR3!0.95!7.89!MATR3;;chr19:4065848..4065909,-!p4@ZBTB7A!0.94!15.52!ZBTB7A;;chr21:34442584..34442587,+!p3@OLIG1!0.94!7.76!OLIG1;;chr2:180726331..180726344,-!p5@ZNF385B!0.94!7.76!ZNF385B;;chr3:21792682..21792720,-!p1@ZNF385D!0.94!7.64!ZNF385D;;chr15:80696666..80696700,+!p4@ARNT2!0.94!7.64!ARNT2;;chr7:64023441..64023462,-!p1@ZNF680!0.93!62.72!ZNF680;;chr10:38265517..38265591,-!p1@ZNF25!0.93!30.30!ZNF25;;chr2:113057415..113057477,+!p3@ZC3H6!0.93!10.02!ZC3H6;;chr10:119302268..119302282,+!p4@EMX2!0.93!7.51!EMX2;;chr1:167298300..167298319,+!p2@POU2F1!0.93!7.51!POU2F1;;chr14:73360799..73360817,-!p1@DPF3!0.92!26.29!DPF3;;chr16:67197776..67197831,+!p4@HSF4!0.92!7.39!HSF4;;chr18:53070913..53070933,-!p16@TCF4!0.92!7.39!TCF4;;chr13:4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|ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
|fonse_cell_line=
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|fonse_cell_line_closure=
Line 66: Line 42:
|fonse_treatment=
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|fonse_treatment_closure=
|fonse_treatment_closure=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/medial%2520frontal%2520gyrus%252c%2520adult%252c%2520donor10252.CNhs12310.10150-102I6.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/medial%2520frontal%2520gyrus%252c%2520adult%252c%2520donor10252.CNhs12310.10150-102I6.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/medial%2520frontal%2520gyrus%252c%2520adult%252c%2520donor10252.CNhs12310.10150-102I6.hg38.nobarcode.bam
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|id=FF:10150-102I6
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|is_obsolete=
|library_id=CNhs12310
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|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10150
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10150
|name=medial frontal gyrus, adult, donor10252
|namespace=FANTOM5
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|rna_box=102
|rna_catalog_number=
|rna_concentration=0.64051
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.24
|rna_od260/280=2.04
|rna_position=I6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=102I6
|rna_weight_ug=48.03825
|sample_age=76
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_lot=NA
|sample_cell_type=CELL MIXTURE - tissue sample
|sample_collaboration=Peter Heutink
|sample_company=
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=donor: 10252
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.22418070788832e-278!GO:0005737;cytoplasm;4.7111986590206e-145!GO:0043226;organelle;2.93102954822007e-99!GO:0043229;intracellular organelle;9.29740576087634e-99!GO:0043227;membrane-bound organelle;2.7635749130529e-92!GO:0043231;intracellular membrane-bound organelle;4.38367595084236e-92!GO:0044444;cytoplasmic part;3.55834348853244e-87!GO:0005515;protein binding;7.60782152736101e-74!GO:0044422;organelle part;1.16913298177948e-60!GO:0044446;intracellular organelle part;1.12809336509733e-59!GO:0032991;macromolecular complex;1.1636316180145e-58!GO:0016043;cellular component organization and biogenesis;1.67070213472442e-47!GO:0033036;macromolecule localization;6.03414968524532e-37!GO:0003723;RNA binding;7.01339939252821e-37!GO:0030529;ribonucleoprotein complex;1.65030865123457e-36!GO:0015031;protein transport;1.28813191094135e-35!GO:0005739;mitochondrion;8.32261683358202e-35!GO:0043234;protein complex;1.56574295112669e-33!GO:0008104;protein localization;1.90856000540374e-33!GO:0045184;establishment of protein localization;2.43418701601792e-32!GO:0044428;nuclear part;1.38414164675389e-31!GO:0043233;organelle lumen;4.80274109738255e-31!GO:0031974;membrane-enclosed lumen;4.80274109738255e-31!GO:0031090;organelle membrane;6.37728998855041e-31!GO:0046907;intracellular transport;2.56398565765428e-29!GO:0051649;establishment of cellular localization;7.75631420486674e-28!GO:0051641;cellular localization;1.72280741090065e-27!GO:0005634;nucleus;1.82740094544308e-27!GO:0016192;vesicle-mediated transport;8.2624854521591e-27!GO:0016071;mRNA metabolic process;1.25439380835808e-26!GO:0044238;primary metabolic process;3.79024942952083e-26!GO:0043170;macromolecule metabolic process;6.52367836257703e-26!GO:0044429;mitochondrial part;8.70314258670658e-26!GO:0044237;cellular metabolic process;2.55759383071933e-24!GO:0019538;protein metabolic process;5.51623148478207e-24!GO:0031975;envelope;1.14935220492285e-23!GO:0008380;RNA splicing;1.16486020423818e-23!GO:0006396;RNA processing;1.33329642347477e-23!GO:0031967;organelle envelope;1.43588948984927e-23!GO:0005829;cytosol;1.60413064250791e-22!GO:0006397;mRNA processing;8.32957838441653e-22!GO:0006886;intracellular protein transport;4.30163781190799e-21!GO:0044260;cellular macromolecule metabolic process;1.10424223149816e-20!GO:0006996;organelle organization and biogenesis;1.68655345130462e-20!GO:0044267;cellular protein metabolic process;4.19970122690088e-20!GO:0006119;oxidative phosphorylation;1.45280630767504e-19!GO:0031981;nuclear lumen;1.59880241516128e-19!GO:0005840;ribosome;2.14931503861546e-18!GO:0005740;mitochondrial envelope;2.31316950887659e-18!GO:0000166;nucleotide binding;2.58486948647905e-18!GO:0005794;Golgi apparatus;3.56665499293059e-18!GO:0031966;mitochondrial membrane;5.11832744340597e-18!GO:0043283;biopolymer metabolic process;7.15295995600276e-18!GO:0031982;vesicle;1.2041267205025e-17!GO:0065003;macromolecular complex assembly;3.45152280093268e-17!GO:0031410;cytoplasmic vesicle;7.81958789850024e-17!GO:0019866;organelle inner membrane;2.69595807371806e-16!GO:0031988;membrane-bound vesicle;2.91891738338717e-16!GO:0005681;spliceosome;5.37700349556878e-16!GO:0005743;mitochondrial inner membrane;1.39153639622969e-15!GO:0016023;cytoplasmic membrane-bound vesicle;1.62311795535901e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.11637311821546e-15!GO:0006412;translation;2.37839912527307e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;2.44689239134237e-15!GO:0016462;pyrophosphatase activity;2.59917369336863e-15!GO:0022607;cellular component assembly;4.08573062666955e-15!GO:0006512;ubiquitin cycle;4.49775826782369e-15!GO:0044455;mitochondrial membrane part;1.5250802908405e-14!GO:0017111;nucleoside-triphosphatase activity;1.54808672937575e-14!GO:0043687;post-translational protein modification;1.55180829703908e-14!GO:0043412;biopolymer modification;2.23941885856347e-14!GO:0032553;ribonucleotide binding;3.91087724773787e-14!GO:0032555;purine ribonucleotide binding;3.91087724773787e-14!GO:0003735;structural constituent of ribosome;4.31453087937733e-14!GO:0005746;mitochondrial respiratory chain;6.83589108168727e-14!GO:0006464;protein modification process;1.25195175908582e-13!GO:0005654;nucleoplasm;2.39399224209848e-13!GO:0045045;secretory pathway;2.71089479255157e-13!GO:0050136;NADH dehydrogenase (quinone) activity;4.84731582997262e-13!GO:0003954;NADH dehydrogenase activity;4.84731582997262e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.84731582997262e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;5.46043741908824e-13!GO:0017076;purine nucleotide binding;6.17277561227594e-13!GO:0007264;small GTPase mediated signal transduction;1.71831375526554e-12!GO:0044451;nucleoplasm part;1.72665878304409e-12!GO:0016874;ligase activity;1.73303470392134e-12!GO:0030695;GTPase regulator activity;1.82331758795562e-12!GO:0010467;gene expression;2.30862962515713e-12!GO:0033279;ribosomal subunit;3.42206094230785e-12!GO:0048770;pigment granule;7.69592323401801e-12!GO:0042470;melanosome;7.69592323401801e-12!GO:0006457;protein folding;8.55693242677468e-12!GO:0006793;phosphorus metabolic process;3.06631638528296e-11!GO:0006796;phosphate metabolic process;3.06631638528296e-11!GO:0005083;small GTPase regulator activity;3.07450218667278e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.15761500043112e-11!GO:0012505;endomembrane system;3.60079035239139e-11!GO:0030964;NADH dehydrogenase complex (quinone);3.68724338546651e-11!GO:0045271;respiratory chain complex I;3.68724338546651e-11!GO:0005747;mitochondrial respiratory chain complex I;3.68724338546651e-11!GO:0043228;non-membrane-bound organelle;3.68724338546651e-11!GO:0043232;intracellular non-membrane-bound organelle;3.68724338546651e-11!GO:0048193;Golgi vesicle transport;3.93863828255066e-11!GO:0008134;transcription factor binding;5.08777676313432e-11!GO:0042775;organelle ATP synthesis coupled electron transport;6.04892228789356e-11!GO:0042773;ATP synthesis coupled electron transport;6.04892228789356e-11!GO:0009058;biosynthetic process;6.06641347982784e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.06980879495716e-10!GO:0008092;cytoskeletal protein binding;1.18530242794336e-10!GO:0022618;protein-RNA complex assembly;1.98330003774723e-10!GO:0051603;proteolysis involved in cellular protein catabolic process;2.76099470584227e-10!GO:0006511;ubiquitin-dependent protein catabolic process;3.26693057724496e-10!GO:0009059;macromolecule biosynthetic process;3.9414182821586e-10!GO:0019941;modification-dependent protein catabolic process;4.47183187148593e-10!GO:0043632;modification-dependent macromolecule catabolic process;4.47183187148593e-10!GO:0030135;coated vesicle;5.39333271408992e-10!GO:0044257;cellular protein catabolic process;6.89174855410265e-10!GO:0003924;GTPase activity;9.21758552321082e-10!GO:0031980;mitochondrial lumen;1.22673987083672e-09!GO:0005759;mitochondrial matrix;1.22673987083672e-09!GO:0006810;transport;1.36219148200009e-09!GO:0044249;cellular biosynthetic process;1.37001822510601e-09!GO:0044445;cytosolic part;1.41759769679674e-09!GO:0019829;cation-transporting ATPase activity;1.47519398632022e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.29319653974083e-09!GO:0051082;unfolded protein binding;2.29319653974083e-09!GO:0006605;protein targeting;2.90320422278187e-09!GO:0044265;cellular macromolecule catabolic process;3.23575925625285e-09!GO:0005768;endosome;3.44822053095231e-09!GO:0007010;cytoskeleton organization and biogenesis;3.63547901234289e-09!GO:0008135;translation factor activity, nucleic acid binding;3.82143218892735e-09!GO:0016604;nuclear body;5.99418482103336e-09!GO:0032940;secretion by cell;6.10365932222367e-09!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.35196149164546e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.95445529051343e-09!GO:0043285;biopolymer catabolic process;8.8584380286148e-09!GO:0016044;membrane organization and biogenesis;9.61562975004907e-09!GO:0005525;GTP binding;1.03051238062584e-08!GO:0000502;proteasome complex (sensu Eukaryota);1.11049360643643e-08!GO:0032559;adenyl ribonucleotide binding;1.24274353981e-08!GO:0007399;nervous system development;1.35665643085748e-08!GO:0043005;neuron projection;2.28257468433936e-08!GO:0016310;phosphorylation;2.29370260653677e-08!GO:0008639;small protein conjugating enzyme activity;2.38483126781511e-08!GO:0016607;nuclear speck;3.2648564298901e-08!GO:0004842;ubiquitin-protein ligase activity;3.35672096861592e-08!GO:0008565;protein transporter activity;3.57019579057599e-08!GO:0030163;protein catabolic process;4.00309551873052e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.00309551873052e-08!GO:0019787;small conjugating protein ligase activity;4.51392017068621e-08!GO:0005524;ATP binding;5.05273028002575e-08!GO:0019899;enzyme binding;6.42212105075491e-08!GO:0006461;protein complex assembly;6.6743150303295e-08!GO:0015986;ATP synthesis coupled proton transport;6.94376682099022e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.94376682099022e-08!GO:0044431;Golgi apparatus part;6.98595516438941e-08!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.28400642807048e-08!GO:0051179;localization;8.28400642807048e-08!GO:0030036;actin cytoskeleton organization and biogenesis;8.95792852364658e-08!GO:0019717;synaptosome;9.88412745080769e-08!GO:0030554;adenyl nucleotide binding;1.39823590810092e-07!GO:0007242;intracellular signaling cascade;1.57642843345983e-07!GO:0051234;establishment of localization;1.5972428659109e-07!GO:0015630;microtubule cytoskeleton;1.94838737743376e-07!GO:0048523;negative regulation of cellular process;1.95438695732719e-07!GO:0000398;nuclear mRNA splicing, via spliceosome;2.49706064164936e-07!GO:0000375;RNA splicing, via transesterification reactions;2.49706064164936e-07!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.49706064164936e-07!GO:0032561;guanyl ribonucleotide binding;2.59713801688284e-07!GO:0019001;guanyl nucleotide binding;2.59713801688284e-07!GO:0015935;small ribosomal subunit;2.71001299669115e-07!GO:0006913;nucleocytoplasmic transport;3.43031494196131e-07!GO:0009057;macromolecule catabolic process;3.8470534375956e-07!GO:0015631;tubulin binding;5.1083971972848e-07!GO:0030029;actin filament-based process;5.23713722222507e-07!GO:0051169;nuclear transport;5.54030139116871e-07!GO:0030136;clathrin-coated vesicle;6.27641113735948e-07!GO:0006446;regulation of translational initiation;6.295686044681e-07!GO:0008287;protein serine/threonine phosphatase complex;6.89345645668278e-07!GO:0044248;cellular catabolic process;7.29479267982318e-07!GO:0016881;acid-amino acid ligase activity;1.15141547479956e-06!GO:0007265;Ras protein signal transduction;1.24743016285684e-06!GO:0006413;translational initiation;1.2739521417642e-06!GO:0003743;translation initiation factor activity;1.32963985359665e-06!GO:0044440;endosomal part;1.51149611827719e-06!GO:0010008;endosome membrane;1.51149611827719e-06!GO:0046034;ATP metabolic process;1.63488931992169e-06!GO:0003712;transcription cofactor activity;2.16508245306939e-06!GO:0031252;leading edge;2.56292373197025e-06!GO:0006754;ATP biosynthetic process;2.56292373197025e-06!GO:0006753;nucleoside phosphate metabolic process;2.56292373197025e-06!GO:0048471;perinuclear region of cytoplasm;2.83562592743152e-06!GO:0031965;nuclear membrane;2.88343631646739e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.27285422631206e-06!GO:0005783;endoplasmic reticulum;3.45030318820008e-06!GO:0016887;ATPase activity;3.64185729895736e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;3.83062300364045e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;3.8804158221222e-06!GO:0051186;cofactor metabolic process;4.03920498548149e-06!GO:0016070;RNA metabolic process;4.20021104445127e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.20021104445127e-06!GO:0009144;purine nucleoside triphosphate metabolic process;4.20021104445127e-06!GO:0005635;nuclear envelope;4.22191131056505e-06!GO:0042623;ATPase activity, coupled;4.29383662168353e-06!GO:0008047;enzyme activator activity;5.00346555792711e-06!GO:0048519;negative regulation of biological process;5.13416292232925e-06!GO:0048475;coated membrane;5.19370426416842e-06!GO:0030117;membrane coat;5.19370426416842e-06!GO:0009060;aerobic respiration;5.38315095417941e-06!GO:0009199;ribonucleoside triphosphate metabolic process;5.38315095417941e-06!GO:0051056;regulation of small GTPase mediated signal transduction;6.38063135230708e-06!GO:0009141;nucleoside triphosphate metabolic process;6.40652211385071e-06!GO:0016469;proton-transporting two-sector ATPase complex;6.62669280134218e-06!GO:0000139;Golgi membrane;6.96335330556656e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.25187577895095e-06!GO:0003779;actin binding;7.69533671071255e-06!GO:0005096;GTPase activator activity;8.29802579897501e-06!GO:0045333;cellular respiration;8.59982156424886e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.3325444898671e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.3325444898671e-06!GO:0015934;large ribosomal subunit;1.0156206269364e-05!GO:0032446;protein modification by small protein conjugation;1.03305239698979e-05!GO:0005874;microtubule;1.03305239698979e-05!GO:0005730;nucleolus;1.04319483844513e-05!GO:0006897;endocytosis;1.21120428843501e-05!GO:0010324;membrane invagination;1.21120428843501e-05!GO:0009142;nucleoside triphosphate biosynthetic process;1.23448571602339e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.23448571602339e-05!GO:0009150;purine ribonucleotide metabolic process;1.24745092909461e-05!GO:0006163;purine nucleotide metabolic process;1.34788376575323e-05!GO:0016568;chromatin modification;1.37023158154218e-05!GO:0009152;purine ribonucleotide biosynthetic process;1.47479855749815e-05!GO:0015078;hydrogen ion transmembrane transporter activity;1.4873688375419e-05!GO:0006323;DNA packaging;1.50285116969514e-05!GO:0006164;purine nucleotide biosynthetic process;1.67858718856593e-05!GO:0016567;protein ubiquitination;2.00073225631756e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.13461332921626e-05!GO:0005769;early endosome;2.39233183517707e-05!GO:0009259;ribonucleotide metabolic process;2.39233183517707e-05!GO:0005770;late endosome;2.46386790805656e-05!GO:0016564;transcription repressor activity;2.84756863339296e-05!GO:0017038;protein import;3.03794731201254e-05!GO:0005761;mitochondrial ribosome;3.11976586383671e-05!GO:0000313;organellar ribosome;3.11976586383671e-05!GO:0005905;coated pit;3.34761079507279e-05!GO:0045259;proton-transporting ATP synthase complex;4.15947434475393e-05!GO:0051128;regulation of cellular component organization and biogenesis;4.71163606446799e-05!GO:0008017;microtubule binding;4.92065579819993e-05!GO:0006099;tricarboxylic acid cycle;5.14139698380534e-05!GO:0046356;acetyl-CoA catabolic process;5.14139698380534e-05!GO:0005085;guanyl-nucleotide exchange factor activity;5.20948404996025e-05!GO:0045786;negative regulation of progression through cell cycle;5.43477365971663e-05!GO:0009260;ribonucleotide biosynthetic process;6.75385312955388e-05!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);7.61996040910348e-05!GO:0000245;spliceosome assembly;8.17107887777688e-05!GO:0009055;electron carrier activity;8.31182871502071e-05!GO:0050789;regulation of biological process;8.94136002113546e-05!GO:0030425;dendrite;9.36083980362497e-05!GO:0005798;Golgi-associated vesicle;0.000101336865358937!GO:0030027;lamellipodium;0.00010681018245822!GO:0008219;cell death;0.000113933551701504!GO:0016265;death;0.000113933551701504!GO:0006259;DNA metabolic process;0.000116144268058039!GO:0000151;ubiquitin ligase complex;0.000120200772625375!GO:0009109;coenzyme catabolic process;0.000124564407416803!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);0.000139057735855902!GO:0030120;vesicle coat;0.000142470589376452!GO:0030662;coated vesicle membrane;0.000142470589376452!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000142470589376452!GO:0015399;primary active transmembrane transporter activity;0.000142470589376452!GO:0050794;regulation of cellular process;0.000158125359786167!GO:0016301;kinase activity;0.000162757104382324!GO:0043492;ATPase activity, coupled to movement of substances;0.000162757104382324!GO:0006732;coenzyme metabolic process;0.000188290867859328!GO:0051246;regulation of protein metabolic process;0.000201180193723439!GO:0000902;cell morphogenesis;0.000210470411279288!GO:0032989;cellular structure morphogenesis;0.000210470411279288!GO:0006403;RNA localization;0.000222541251227678!GO:0012501;programmed cell death;0.000238586480103271!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000245602492163811!GO:0000159;protein phosphatase type 2A complex;0.000249073260781532!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00025315704917308!GO:0006084;acetyl-CoA metabolic process;0.000255865691463412!GO:0046578;regulation of Ras protein signal transduction;0.000259742689148422!GO:0022890;inorganic cation transmembrane transporter activity;0.00026182377697627!GO:0006915;apoptosis;0.000270030519942129!GO:0050657;nucleic acid transport;0.000271974163552243!GO:0051236;establishment of RNA localization;0.000271974163552243!GO:0050658;RNA transport;0.000271974163552243!GO:0051187;cofactor catabolic process;0.000287818773075766!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00029293030779603!GO:0008021;synaptic vesicle;0.000302417763969951!GO:0004674;protein serine/threonine kinase activity;0.000324580214148423!GO:0009966;regulation of signal transduction;0.00032591234325885!GO:0044453;nuclear membrane part;0.00032711599815964!GO:0003729;mRNA binding;0.000339739829522729!GO:0048489;synaptic vesicle transport;0.000347382221612336!GO:0006366;transcription from RNA polymerase II promoter;0.00035824728362664!GO:0004721;phosphoprotein phosphatase activity;0.000375911381459956!GO:0031072;heat shock protein binding;0.000376544328262957!GO:0005643;nuclear pore;0.000410463586893763!GO:0045055;regulated secretory pathway;0.000416064290471729!GO:0019208;phosphatase regulator activity;0.000427965506158171!GO:0005793;ER-Golgi intermediate compartment;0.000433752666329783!GO:0003714;transcription corepressor activity;0.000506315164541223!GO:0016311;dephosphorylation;0.000519635811409877!GO:0006606;protein import into nucleus;0.000519635811409877!GO:0043566;structure-specific DNA binding;0.000567980418308239!GO:0007266;Rho protein signal transduction;0.000603766294907365!GO:0008601;protein phosphatase type 2A regulator activity;0.000615982074928572!GO:0006888;ER to Golgi vesicle-mediated transport;0.000628275402055166!GO:0051170;nuclear import;0.000697192311820882!GO:0007269;neurotransmitter secretion;0.000698752002312986!GO:0006613;cotranslational protein targeting to membrane;0.00071181351644654!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000712192791025293!GO:0030133;transport vesicle;0.000757797009675462!GO:0003676;nucleic acid binding;0.000772321614646666!GO:0009892;negative regulation of metabolic process;0.000841648309331402!GO:0005773;vacuole;0.000841648309331402!GO:0006607;NLS-bearing substrate import into nucleus;0.000862321494241581!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000921896395454266!GO:0009056;catabolic process;0.00094450685105091!GO:0003724;RNA helicase activity;0.000964337795664186!GO:0005741;mitochondrial outer membrane;0.000976283924745898!GO:0051087;chaperone binding;0.00106405735495217!GO:0048468;cell development;0.00110551488829131!GO:0016197;endosome transport;0.00110551488829131!GO:0051276;chromosome organization and biogenesis;0.00110551488829131!GO:0044432;endoplasmic reticulum part;0.00111114971884889!GO:0005938;cell cortex;0.00118682546745379!GO:0016791;phosphoric monoester hydrolase activity;0.00122183518507223!GO:0008026;ATP-dependent helicase activity;0.00124979603574019!GO:0006470;protein amino acid dephosphorylation;0.00128364095155263!GO:0019226;transmission of nerve impulse;0.00135638908467886!GO:0030532;small nuclear ribonucleoprotein complex;0.0014706732677902!GO:0043623;cellular protein complex assembly;0.00147514690600832!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.0014924179025649!GO:0004812;aminoacyl-tRNA ligase activity;0.0014924179025649!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.0014924179025649!GO:0019904;protein domain specific binding;0.0014924179025649!GO:0030118;clathrin coat;0.00149410175568089!GO:0019888;protein phosphatase regulator activity;0.00151276879765512!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00176731006364727!GO:0019902;phosphatase binding;0.00180315859490097!GO:0051188;cofactor biosynthetic process;0.00181414665059752!GO:0051726;regulation of cell cycle;0.00187971499375666!GO:0004386;helicase activity;0.00194181214218438!GO:0007019;microtubule depolymerization;0.0019644480315839!GO:0031901;early endosome membrane;0.00197666720490706!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00199623679066877!GO:0004722;protein serine/threonine phosphatase activity;0.00199957583221137!GO:0016481;negative regulation of transcription;0.00203092748646746!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00210205392476413!GO:0007049;cell cycle;0.0021366230291626!GO:0003697;single-stranded DNA binding;0.00215953377627058!GO:0005875;microtubule associated complex;0.00225225592551015!GO:0030867;rough endoplasmic reticulum membrane;0.00229296008490037!GO:0006752;group transfer coenzyme metabolic process;0.00235573470002604!GO:0003713;transcription coactivator activity;0.00245959674561284!GO:0006892;post-Golgi vesicle-mediated transport;0.00249286870578735!GO:0005813;centrosome;0.00250586633780402!GO:0051028;mRNA transport;0.00252730846814488!GO:0022406;membrane docking;0.0025285928377106!GO:0048278;vesicle docking;0.0025285928377106!GO:0016050;vesicle organization and biogenesis;0.002557507999928!GO:0006402;mRNA catabolic process;0.00257484802797521!GO:0050767;regulation of neurogenesis;0.00267534386996278!GO:0031968;organelle outer membrane;0.00270619318901248!GO:0019867;outer membrane;0.00273421458808673!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00273421458808673!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00281377177382427!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00281377177382427!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00281377177382427!GO:0000074;regulation of progression through cell cycle;0.0028293575168723!GO:0043038;amino acid activation;0.0029158411910749!GO:0006418;tRNA aminoacylation for protein translation;0.0029158411910749!GO:0043039;tRNA aminoacylation;0.0029158411910749!GO:0006904;vesicle docking during exocytosis;0.0030686315165594!GO:0006916;anti-apoptosis;0.00326616383776392!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00336147430701184!GO:0043069;negative regulation of programmed cell death;0.00344766085808538!GO:0006650;glycerophospholipid metabolic process;0.0034508267646037!GO:0008154;actin polymerization and/or depolymerization;0.00366976408986139!GO:0005791;rough endoplasmic reticulum;0.00381536528125578!GO:0005516;calmodulin binding;0.00386540433329438!GO:0043066;negative regulation of apoptosis;0.00390313120243044!GO:0006333;chromatin assembly or disassembly;0.00394678582145323!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00394678582145323!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0039521402417073!GO:0030426;growth cone;0.00408059426515676!GO:0030427;site of polarized growth;0.00417314887605253!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00419021678935653!GO:0031324;negative regulation of cellular metabolic process;0.00419268042505922!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00427363567627527!GO:0005099;Ras GTPase activator activity;0.00433732851766434!GO:0030424;axon;0.00444684084329405!GO:0015980;energy derivation by oxidation of organic compounds;0.00469998140158414!GO:0048487;beta-tubulin binding;0.00484959871427468!GO:0008286;insulin receptor signaling pathway;0.00486522332261834!GO:0005815;microtubule organizing center;0.00486522332261834!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.00502352234082098!GO:0016740;transferase activity;0.00515005621367101!GO:0033673;negative regulation of kinase activity;0.00517002393046777!GO:0006469;negative regulation of protein kinase activity;0.00517002393046777!GO:0000323;lytic vacuole;0.00530320115533944!GO:0005764;lysosome;0.00530320115533944!GO:0008654;phospholipid biosynthetic process;0.00541626083723051!GO:0008139;nuclear localization sequence binding;0.00554227354694582!GO:0043209;myelin sheath;0.00554263205724069!GO:0005100;Rho GTPase activator activity;0.0055963144566912!GO:0031114;regulation of microtubule depolymerization;0.00579618044695002!GO:0007026;negative regulation of microtubule depolymerization;0.00579618044695002!GO:0001726;ruffle;0.00582237731672684!GO:0005048;signal sequence binding;0.00585082265662976!GO:0005789;endoplasmic reticulum membrane;0.00595960026253352!GO:0005869;dynactin complex;0.00620198522648375!GO:0044448;cell cortex part;0.00622110668147642!GO:0030054;cell junction;0.00624867295257951!GO:0009108;coenzyme biosynthetic process;0.00634883128352488!GO:0051168;nuclear export;0.00635838607142278!GO:0005839;proteasome core complex (sensu Eukaryota);0.00654381517268662!GO:0016363;nuclear matrix;0.00655519570540245!GO:0050839;cell adhesion molecule binding;0.00681036566659516!GO:0031902;late endosome membrane;0.00692215320984269!GO:0045892;negative regulation of transcription, DNA-dependent;0.00704995740968522!GO:0032011;ARF protein signal transduction;0.00707025503405594!GO:0032012;regulation of ARF protein signal transduction;0.00707025503405594!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00707025503405594!GO:0055083;monovalent inorganic anion homeostasis;0.00707025503405594!GO:0055064;chloride ion homeostasis;0.00707025503405594!GO:0030644;cellular chloride ion homeostasis;0.00707025503405594!GO:0046488;phosphatidylinositol metabolic process;0.00707073879050537!GO:0007017;microtubule-based process;0.00711539773630358!GO:0001505;regulation of neurotransmitter levels;0.00716977926022227!GO:0048167;regulation of synaptic plasticity;0.00716977926022227!GO:0006887;exocytosis;0.00742990333196061!GO:0043087;regulation of GTPase activity;0.00768661553901293!GO:0006891;intra-Golgi vesicle-mediated transport;0.00778720399297654!GO:0030258;lipid modification;0.00781722694082881!GO:0051261;protein depolymerization;0.00782576400137918!GO:0046467;membrane lipid biosynthetic process;0.00782576400137918!GO:0019887;protein kinase regulator activity;0.00789004178480954!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.0079261461940782!GO:0012506;vesicle membrane;0.00808937439381212!GO:0051427;hormone receptor binding;0.00816078390606227!GO:0050811;GABA receptor binding;0.00845321157702872!GO:0007272;ensheathment of neurons;0.00845321157702872!GO:0008366;axon ensheathment;0.00845321157702872!GO:0006612;protein targeting to membrane;0.00885140984547831!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.0094466542830651!GO:0051348;negative regulation of transferase activity;0.0094486942202402!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0098305382873423!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00999570521568513!GO:0042802;identical protein binding;0.0101314856210397!GO:0051920;peroxiredoxin activity;0.0110711573110007!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0112809328916262!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.011285059375686!GO:0019198;transmembrane receptor protein phosphatase activity;0.011285059375686!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.0114469074331103!GO:0004667;prostaglandin-D synthase activity;0.0114469074331103!GO:0050802;circadian sleep/wake cycle, sleep;0.0114469074331103!GO:0022410;circadian sleep/wake cycle process;0.0114469074331103!GO:0042749;regulation of circadian sleep/wake cycle;0.0114469074331103!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0114469074331103!GO:0008186;RNA-dependent ATPase activity;0.011951436672585!GO:0050803;regulation of synapse structure and activity;0.0119615118903367!GO:0030742;GTP-dependent protein binding;0.012223207522995!GO:0001508;regulation of action potential;0.0122561888415328!GO:0043021;ribonucleoprotein binding;0.0122561888415328!GO:0030384;phosphoinositide metabolic process;0.0129611952120824!GO:0042578;phosphoric ester hydrolase activity;0.0138466275332538!GO:0035257;nuclear hormone receptor binding;0.0138687508061291!GO:0030660;Golgi-associated vesicle membrane;0.0142973686879866!GO:0003690;double-stranded DNA binding;0.0147852692984028!GO:0008361;regulation of cell size;0.0150460118801291!GO:0051020;GTPase binding;0.015441735759096!GO:0030658;transport vesicle membrane;0.0155578363319817!GO:0048500;signal recognition particle;0.0158447519800962!GO:0004672;protein kinase activity;0.0158925449195772!GO:0065007;biological regulation;0.0158996231078912!GO:0035035;histone acetyltransferase binding;0.0164481362037681!GO:0007243;protein kinase cascade;0.0173090710609483!GO:0005774;vacuolar membrane;0.0174852086935747!GO:0048699;generation of neurons;0.0175096926349616!GO:0046930;pore complex;0.0175993519777788!GO:0006643;membrane lipid metabolic process;0.0177780933815484!GO:0015629;actin cytoskeleton;0.0177780933815484!GO:0022008;neurogenesis;0.0183048057460593!GO:0030041;actin filament polymerization;0.0183048057460593!GO:0019903;protein phosphatase binding;0.018453563034151!GO:0051252;regulation of RNA metabolic process;0.0186336870634437!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.0189705456644449!GO:0007268;synaptic transmission;0.0195047424188621!GO:0044433;cytoplasmic vesicle part;0.019535288905573!GO:0043086;negative regulation of catalytic activity;0.0197167925992213!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0201158287131029!GO:0033043;regulation of organelle organization and biogenesis;0.0201158287131029!GO:0045296;cadherin binding;0.0204641172030575!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0204898866246038!GO:0042254;ribosome biogenesis and assembly;0.0207144426638697!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0208276742293463!GO:0005092;GDP-dissociation inhibitor activity;0.0211306203395121!GO:0035023;regulation of Rho protein signal transduction;0.0211306203395121!GO:0003746;translation elongation factor activity;0.0211306203395121!GO:0065002;intracellular protein transport across a membrane;0.021208127690777!GO:0000059;protein import into nucleus, docking;0.0214306262633203!GO:0006414;translational elongation;0.0214754043244039!GO:0007050;cell cycle arrest;0.0215082025385561!GO:0065009;regulation of a molecular function;0.0216326266312246!GO:0031124;mRNA 3'-end processing;0.0217390806988565!GO:0019207;kinase regulator activity;0.0226296768889638!GO:0004298;threonine endopeptidase activity;0.0226961612486814!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0226961612486814!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0228729399762858!GO:0005868;cytoplasmic dynein complex;0.0236458215286949!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0237040772954524!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0237040772954524!GO:0006401;RNA catabolic process;0.0242106155067979!GO:0005667;transcription factor complex;0.0244993390483157!GO:0043488;regulation of mRNA stability;0.0247165910265372!GO:0043487;regulation of RNA stability;0.0247165910265372!GO:0008022;protein C-terminus binding;0.0248933890673954!GO:0051540;metal cluster binding;0.0248933890673954!GO:0051536;iron-sulfur cluster binding;0.0248933890673954!GO:0005885;Arp2/3 protein complex;0.0253763766645184!GO:0019894;kinesin binding;0.0255770800747081!GO:0042026;protein refolding;0.0256081188428611!GO:0008088;axon cargo transport;0.0256585962950127!GO:0006468;protein amino acid phosphorylation;0.0258030609365566!GO:0030132;clathrin coat of coated pit;0.0258159850491968!GO:0000209;protein polyubiquitination;0.0264787037891782!GO:0016049;cell growth;0.0270428880252815!GO:0006376;mRNA splice site selection;0.027760226718027!GO:0000389;nuclear mRNA 3'-splice site recognition;0.027760226718027!GO:0004004;ATP-dependent RNA helicase activity;0.0284402462663949!GO:0000314;organellar small ribosomal subunit;0.0287186998940784!GO:0005763;mitochondrial small ribosomal subunit;0.0287186998940784!GO:0030182;neuron differentiation;0.0288532496362602!GO:0030137;COPI-coated vesicle;0.0291211928827545!GO:0007034;vacuolar transport;0.0292929607896445!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0292929607896445!GO:0031371;ubiquitin conjugating enzyme complex;0.0300298711377578!GO:0030030;cell projection organization and biogenesis;0.0302564205077006!GO:0048858;cell projection morphogenesis;0.0302564205077006!GO:0032990;cell part morphogenesis;0.0302564205077006!GO:0009117;nucleotide metabolic process;0.0307424148187019!GO:0031267;small GTPase binding;0.0311930819077019!GO:0016859;cis-trans isomerase activity;0.031399967929374!GO:0051789;response to protein stimulus;0.0324590800837609!GO:0006986;response to unfolded protein;0.0324590800837609!GO:0003725;double-stranded RNA binding;0.0329460588993152!GO:0005765;lysosomal membrane;0.0334812435358655!GO:0001578;microtubule bundle formation;0.0342883992799341!GO:0017166;vinculin binding;0.0344685524718644!GO:0000062;acyl-CoA binding;0.0345738108705082!GO:0035258;steroid hormone receptor binding;0.0346212178828668!GO:0001666;response to hypoxia;0.0346212178828668!GO:0005952;cAMP-dependent protein kinase complex;0.0354853069226834!GO:0030911;TPR domain binding;0.0362260254569805!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0363643104131843!GO:0019783;small conjugating protein-specific protease activity;0.0363869847837237!GO:0000287;magnesium ion binding;0.0364598918631374!GO:0017016;Ras GTPase binding;0.0371167000305936!GO:0043681;protein import into mitochondrion;0.0376081980391939!GO:0043407;negative regulation of MAP kinase activity;0.0378293737029777!GO:0019911;structural constituent of myelin sheath;0.0378498202623246!GO:0005545;phosphatidylinositol binding;0.0384794823625581!GO:0051287;NAD binding;0.0397749400357682!GO:0016579;protein deubiquitination;0.0401137593560029!GO:0008090;retrograde axon cargo transport;0.0411738381395022!GO:0033596;TSC1-TSC2 complex;0.0411738381395022!GO:0033693;neurofilament bundle assembly;0.0411738381395022!GO:0006665;sphingolipid metabolic process;0.0424450918390257!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0425043648211596!GO:0045047;protein targeting to ER;0.0425043648211596!GO:0003711;transcription elongation regulator activity;0.0429257452699891!GO:0008180;signalosome;0.0440562326914262!GO:0004843;ubiquitin-specific protease activity;0.0441568690806696!GO:0004183;carboxypeptidase E activity;0.0442365269640891!GO:0030070;insulin processing;0.0442365269640891!GO:0030125;clathrin vesicle coat;0.0442365269640891!GO:0030665;clathrin coated vesicle membrane;0.0442365269640891!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0451175247177212!GO:0046839;phospholipid dephosphorylation;0.0451195177528189!GO:0030659;cytoplasmic vesicle membrane;0.0462625779599282!GO:0031123;RNA 3'-end processing;0.048183748010945!GO:0006818;hydrogen transport;0.048183748010945!GO:0006974;response to DNA damage stimulus;0.048183748010945!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.048183748010945!GO:0015002;heme-copper terminal oxidase activity;0.048183748010945!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.048183748010945!GO:0004129;cytochrome-c oxidase activity;0.048183748010945!GO:0042995;cell projection;0.0482360913792027!GO:0044456;synapse part;0.0482791427221148!GO:0016079;synaptic vesicle exocytosis;0.0486977903545062!GO:0044437;vacuolar part;0.0486977903545062!GO:0031628;opioid receptor binding;0.0488503164366976!GO:0031852;mu-type opioid receptor binding;0.0488503164366976!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0489446023119144!GO:0004683;calmodulin-dependent protein kinase activity;0.0495865162928693
|sample_id=10150
|sample_note=
|sample_sex=female
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=medial frontal gyrus
|top_motifs=REST:3.88884208934;MYFfamily:3.83625240843;DBP:3.82563332998;NHLH1,2:3.75731845057;AHR_ARNT_ARNT2:3.57850236437;PRRX1,2:3.57636513421;CUX2:3.4055686946;EGR1..3:3.35707214746;PRDM1:3.35324624368;ZFP161:3.26174566035;ATF2:3.23979644727;RREB1:3.17148042825;MED-1{core}:3.08816028016;MTE{core}:2.97195385992;ZBTB6:2.84820259375;GTF2I:2.84568451894;MTF1:2.8244153942;PAX6:2.7628893242;MZF1:2.73645969455;GATA4:2.71010605088;HOXA9_MEIS1:2.70028498842;OCT4_SOX2{dimer}:2.69517061143;TFAP2B:2.64495504111;SOX2:2.51562059526;NKX3-2:2.4993618606;POU6F1:2.49874942405;POU5F1:2.48780561418;ZNF384:2.40431798541;NFIX:2.39704624708;PATZ1:2.39387051197;RFX1:2.34609789484;FOXD3:2.33463258993;HIC1:2.32824347474;FOXM1:2.32702727838;RFX2..5_RFXANK_RFXAP:2.30526378127;PAX5:2.23522489148;PAX4:2.11709212086;NFIL3:2.07922250168;HBP1_HMGB_SSRP1_UBTF:2.0478292137;CDC5L:2.03528378695;KLF4:2.00547233642;GFI1B:2.00203258054;SOX5:1.98352089335;IKZF2:1.96819222893;BREu{core}:1.94929418826;SMAD1..7,9:1.91754325557;HOX{A4,D4}:1.90838043995;TGIF1:1.89663808121;LMO2:1.8847134967;FOXP1:1.87564309195;FOX{F1,F2,J1}:1.8700812237;BPTF:1.86717507935;FOXQ1:1.84892152555;MAZ:1.84076990739;SOX{8,9,10}:1.80154790629;ARID5B:1.76588562612;HMGA1,2:1.69764963816;POU3F1..4:1.61712633839;NKX6-1,2:1.57191602644;NRF1:1.51288950293;TEF:1.4945610534;TFDP1:1.38134079373;FOXP3:1.37106617696;EP300:1.36846262857;STAT1,3:1.3593829521;SOX17:1.31529382061;XBP1:1.3100706546;RBPJ:1.28302086695;LEF1_TCF7_TCF7L1,2:1.27418236415;JUN:1.19360432919;T:1.18136161315;EBF1:1.08928410994;HMX1:1.08853854535;GCM1,2:1.07116324543;ZNF143:1.06775264971;ZNF238:1.04840113339;SP1:1.04818879469;MAFB:1.01204380358;ALX1:1.00344416717;FOX{D1,D2}:0.937708629843;HAND1,2:0.91507438891;AR:0.899803431023;POU1F1:0.88233586551;GTF2A1,2:0.867022387196;ADNP_IRX_SIX_ZHX:0.86455009632;SREBF1,2:0.835003801177;TOPORS:0.823761339858;STAT2,4,6:0.810253628804;NANOG:0.760678657139;TLX1..3_NFIC{dimer}:0.743969363322;SPZ1:0.729369583481;TFAP2{A,C}:0.716266790899;MYOD1:0.688224974125;NKX2-3_NKX2-5:0.683813430522;NR3C1:0.661780129016;ONECUT1,2:0.653317536908;FOXL1:0.627352799146;TLX2:0.598824571099;ZNF423:0.585607907592;ZBTB16:0.585014748211;GZF1:0.580704756104;RORA:0.569246662465;ESRRA:0.564619319193;MYBL2:0.558718341679;GFI1:0.544205164026;FOXO1,3,4:0.408693444062;FOXN1:0.386249315478;ZEB1:0.385352251128;CRX:0.382035780141;CREB1:0.368557691122;MEF2{A,B,C,D}:0.364269978389;ZIC1..3:0.338114307831;PAX2:0.250957889984;UFEwm:0.214199890397;PBX1:0.199372326633;IRF7:0.1829519822;FOX{I1,J2}:0.180764766967;YY1:0.172557557043;ATF5_CREB3:0.169114598646;NFATC1..3:0.147108026164;IKZF1:0.0410678068385;AIRE:0.0133121947289;PAX1,9:-0.0202981185629;ATF4:-0.0436824647678;NFY{A,B,C}:-0.0570105530821;HSF1,2:-0.11244236573;XCPE1{core}:-0.133900913757;NFE2L2:-0.134213111224;PDX1:-0.141401133922;IRF1,2:-0.141426106595;NANOG{mouse}:-0.158856124601;FOXA2:-0.17677441796;DMAP1_NCOR{1,2}_SMARC:-0.222877312338;PAX3,7:-0.236291024438;LHX3,4:-0.238328752092;CDX1,2,4:-0.304459176288;NKX3-1:-0.333465094952;HOX{A6,A7,B6,B7}:-0.369721750092;VSX1,2:-0.372185532723;SPI1:-0.405870363644;TBX4,5:-0.446169302308;CEBPA,B_DDIT3:-0.497992784497;SNAI1..3:-0.616297842654;NKX2-2,8:-0.622322912916;NFE2:-0.628374047101;PITX1..3:-0.637399038889;EVI1:-0.673193690993;bHLH_family:-0.673294672857;SPIB:-0.711262537072;NR1H4:-0.744840760081;GATA6:-0.745569339854;ATF6:-0.80263351426;ETS1,2:-0.810994028345;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.861508987468;TAL1_TCF{3,4,12}:-0.90504502646;TFAP4:-0.923119137608;HNF1A:-1.0065175973;HIF1A:-1.05010689643;E2F1..5:-1.08988589327;HNF4A_NR2F1,2:-1.11140807477;FOSL2:-1.12892617377;TEAD1:-1.13769727897;BACH2:-1.13801205756;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.1430620489;POU2F1..3:-1.15030036892;TP53:-1.1618760853;FOS_FOS{B,L1}_JUN{B,D}:-1.19053327041;NFE2L1:-1.20439783416;RUNX1..3:-1.25740673425;PAX8:-1.26447115768;NFKB1_REL_RELA:-1.29260771657;TFCP2:-1.31766026149;GLI1..3:-1.33629355552;ZNF148:-1.39391034305;ELF1,2,4:-1.42688162002;ELK1,4_GABP{A,B1}:-1.45209519709;RXRA_VDR{dimer}:-1.46959396928;RXR{A,B,G}:-1.47514267549;NR5A1,2:-1.48732823162;HLF:-1.52206563485;TBP:-1.52699006517;ALX4:-1.63966290361;MYB:-1.7656252828;ESR1:-1.88030758509;PPARG:-1.89088630384;SRF:-1.96650664854;NKX2-1,4:-2.14545408856;STAT5{A,B}:-2.2276692458;HOX{A5,B5}:-2.24386858864;NR6A1:-2.34036646272;EN1,2:-2.68197641168;HES1:-2.7029623225
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10150-102I6;search_select_hide=table117:FF:10150-102I6
}}
}}

Latest revision as of 12:22, 3 June 2020

Name:medial frontal gyrus, adult, donor10252
Species:Human (Homo sapiens)
Library ID:CNhs12310
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuemedial frontal gyrus
dev stageNA
sexfemale
age76
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyNA
collaborationPeter Heutink
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005747
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12310 CAGE DRX008683 DRR009555
Accession ID Hg19

Library idBAMCTSS
CNhs12310 DRZ000980 DRZ002365
Accession ID Hg38

Library idBAMCTSS
CNhs12310 DRZ012330 DRZ013715
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload
HumanCAGEScan Download raw sequence, BAM & CTSS

Library id3prime-FASTQ5prime-FASTQBAMCTSS
NCig10023downloaddownloaddownloaddownload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.376
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.951
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.295
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0.097
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.138
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.56
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0512
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.176
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0512
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0.138
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0.273
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0.176
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0619
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.255
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.843
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.097
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0512
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.121
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0.0512
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.0784
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.057
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.787
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.0512
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.193
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.42
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0483
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0512
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0.097
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.654
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.0502
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.603
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0512
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.0616
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.575
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0512
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0.328
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.468
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.547
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0.0512
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.762
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial1.123
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.097
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0.118
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.211
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.0387
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.7
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.603
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0.138
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.478
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.0512
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.603
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.0512
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12310

Jaspar motifP-value
MA0002.20.0243
MA0003.10.254
MA0004.10.374
MA0006.10.274
MA0007.10.284
MA0009.10.14
MA0014.10.647
MA0017.16.33837e-4
MA0018.20.459
MA0019.10.64
MA0024.10.897
MA0025.10.356
MA0027.10.544
MA0028.10.0574
MA0029.10.0207
MA0030.10.55
MA0031.10.954
MA0035.20.00457
MA0038.10.366
MA0039.20.142
MA0040.10.793
MA0041.10.513
MA0042.10.961
MA0043.10.97
MA0046.10.00197
MA0047.20.0353
MA0048.10.136
MA0050.10.0382
MA0051.10.0907
MA0052.10.925
MA0055.19.97132e-4
MA0057.10.851
MA0058.10.316
MA0059.10.0704
MA0060.10.713
MA0061.10.00716
MA0062.20.00235
MA0065.21.62703e-4
MA0066.10.00903
MA0067.10.94
MA0068.10.885
MA0069.10.526
MA0070.10.493
MA0071.10.0166
MA0072.10.265
MA0073.10.379
MA0074.10.205
MA0076.10.0949
MA0077.10.251
MA0078.10.7
MA0079.20.631
MA0080.27.23011e-8
MA0081.10.0345
MA0083.10.00751
MA0084.10.761
MA0087.10.755
MA0088.10.194
MA0090.10.369
MA0091.10.477
MA0092.10.28
MA0093.10.386
MA0099.25.10555e-19
MA0100.10.569
MA0101.10.00283
MA0102.20.221
MA0103.10.145
MA0104.20.42
MA0105.10.00158
MA0106.10.0368
MA0107.10.00452
MA0108.20.162
MA0111.10.559
MA0112.29.35553e-4
MA0113.10.407
MA0114.19.78659e-4
MA0115.10.29
MA0116.10.00882
MA0117.10.907
MA0119.10.104
MA0122.10.513
MA0124.10.703
MA0125.10.421
MA0131.10.997
MA0135.10.127
MA0136.16.64524e-12
MA0137.20.626
MA0138.20.347
MA0139.10.425
MA0140.18.54422e-4
MA0141.10.00255
MA0142.10.808
MA0143.10.83
MA0144.10.57
MA0145.10.16
MA0146.10.0122
MA0147.10.298
MA0148.10.0547
MA0149.10.0236
MA0150.13.50726e-4
MA0152.10.496
MA0153.10.0507
MA0154.10.0522
MA0155.10.517
MA0156.11.28055e-7
MA0157.10.649
MA0159.10.00478
MA0160.10.00827
MA0162.10.106
MA0163.12.05321e-5
MA0164.10.771
MA0258.10.00793
MA0259.10.818



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12310

Novel motifP-value
10.0633
100.0542
1000.293
1010.45
1020.866
1030.117
1040.144
1050.113
1060.0536
1070.106
1080.974
1090.00251
110.0142
1100.0498
1110.161
1120.413
1130.556
1140.157
1150.885
1160.163
1170.011
1180.12
1190.173
120.503
1200.221
1210.332
1220.914
1230.597
1240.114
1250.164
1260.0153
1270.554
1280.171
1290.524
139.39575e-4
1300.226
1310.0686
1320.598
1330.0499
1340.613
1350.225
1360.00179
1370.943
1380.964
1390.114
140.793
1400.41
1410.612
1420.763
1430.0489
1440.869
1450.123
1460.484
1470.769
1480.303
1490.227
150.0878
1500.165
1510.639
1520.0904
1530.835
1540.479
1550.877
1560.432
1570.452
1580.364
1590.0316
160.0461
1600.247
1610.223
1620.684
1630.707
1640.0423
1650.0399
1660.932
1670.815
1680.556
1690.00944
170.134
180.127
190.185
20.891
200.127
210.0605
220.189
230.448
240.0414
250.457
261.85883e-4
270.81
280.653
290.00722
30.0494
300.962
310.888
320.0266
330.0495
340.635
350.621
360.162
370.0367
380.349
390.25
40.692
400.0281
410.293
420.245
430.12
440.168
450.682
460.0747
470.0679
480.057
490.21
50.59
500.332
510.434
520.531
530.85
540.397
550.561
560.484
570.313
580.309
590.0844
60.946
600.0803
610.0667
620.196
630.185
640.21
650.282
660.15
670.363
680.126
690.292
70.0515
700.0537
710.011
720.414
730.0299
740.922
750.0422
760.434
770.148
780.00223
790.359
80.0604
800.527
810.705
820.625
830.0663
840.671
850.248
860.237
872.09946e-4
880.795
890.392
90.37
900.0724
910.751
920.526
930.997
940.191
950.0133
960.797
970.703
980.234
990.595



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12310


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000955 (brain)
0000200 (gyrus)
0001870 (frontal cortex)
0000956 (cerebral cortex)
0002702 (middle frontal gyrus)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000002 (in vivo cell sample)
0000001 (sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

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