FF:10173-103C2: Difference between revisions

Latest revision as of 12:25, 3 June 2020

Name:	cerebellum - adult, donor10196
Species:	Human (Homo sapiens)
Library ID:	CNhs13799
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	cerebellum
dev stage	NA
sex	female
age	60
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005550

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13799		CAGE		DRX008631		DRR009503

Accession ID Hg19

Library id		BAM		CTSS
CNhs13799		DRZ000928		DRZ002313

Accession ID Hg38

Library id		BAM		CTSS
CNhs13799		DRZ012278		DRZ013663

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.284
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.361
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0.746
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	1.007
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.387
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.437
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.22
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.263
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.671
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.746
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0.608
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.402
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0669
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.608
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.402
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.573
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.366
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	1.405
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.402
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.608
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13799

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0573
MA0003.1	MA0003.1	0.233
MA0004.1	MA0004.1	0.21
MA0006.1	MA0006.1	0.153
MA0007.1	MA0007.1	0.263
MA0009.1	MA0009.1	0.384
MA0014.1	MA0014.1	0.639
MA0017.1	MA0017.1	0.0122
MA0018.2	MA0018.2	0.0412
MA0019.1	MA0019.1	0.961
MA0024.1	MA0024.1	0.413
MA0025.1	MA0025.1	0.104
MA0027.1	MA0027.1	0.982
MA0028.1	MA0028.1	0.11
MA0029.1	MA0029.1	0.212
MA0030.1	MA0030.1	0.349
MA0031.1	MA0031.1	0.476
MA0035.2	MA0035.2	0.0735
MA0038.1	MA0038.1	0.112
MA0039.2	MA0039.2	0.15
MA0040.1	MA0040.1	0.97
MA0041.1	MA0041.1	0.167
MA0042.1	MA0042.1	0.42
MA0043.1	MA0043.1	0.623
MA0046.1	MA0046.1	0.129
MA0047.2	MA0047.2	0.111
MA0048.1	MA0048.1	0.241
MA0050.1	MA0050.1	1.22879e-4
MA0051.1	MA0051.1	0.00257
MA0052.1	MA0052.1	0.186
MA0055.1	MA0055.1	0.0396
MA0057.1	MA0057.1	0.453
MA0058.1	MA0058.1	0.227
MA0059.1	MA0059.1	0.063
MA0060.1	MA0060.1	0.0303
MA0061.1	MA0061.1	0.0121
MA0062.2	MA0062.2	0.00263
MA0065.2	MA0065.2	0.00239
MA0066.1	MA0066.1	0.129
MA0067.1	MA0067.1	0.701
MA0068.1	MA0068.1	0.636
MA0069.1	MA0069.1	0.916
MA0070.1	MA0070.1	0.411
MA0071.1	MA0071.1	0.255
MA0072.1	MA0072.1	0.427
MA0073.1	MA0073.1	0.243
MA0074.1	MA0074.1	0.287
MA0076.1	MA0076.1	0.172
MA0077.1	MA0077.1	0.662
MA0078.1	MA0078.1	0.764
MA0079.2	MA0079.2	0.693
MA0080.2	MA0080.2	1.50382e-9
MA0081.1	MA0081.1	0.0617
MA0083.1	MA0083.1	0.00119
MA0084.1	MA0084.1	0.852
MA0087.1	MA0087.1	0.85
MA0088.1	MA0088.1	0.496
MA0090.1	MA0090.1	0.0365
MA0091.1	MA0091.1	0.624
MA0092.1	MA0092.1	0.448
MA0093.1	MA0093.1	0.233
MA0099.2	MA0099.2	1.60268e-16
MA0100.1	MA0100.1	0.738
MA0101.1	MA0101.1	0.00407
MA0102.2	MA0102.2	0.0373
MA0103.1	MA0103.1	0.564
MA0104.2	MA0104.2	0.739
MA0105.1	MA0105.1	0.0116
MA0106.1	MA0106.1	0.0266
MA0107.1	MA0107.1	0.00402
MA0108.2	MA0108.2	0.108
MA0111.1	MA0111.1	0.724
MA0112.2	MA0112.2	0.0037
MA0113.1	MA0113.1	0.477
MA0114.1	MA0114.1	0.00682
MA0115.1	MA0115.1	0.689
MA0116.1	MA0116.1	0.0188
MA0117.1	MA0117.1	0.895
MA0119.1	MA0119.1	0.157
MA0122.1	MA0122.1	0.409
MA0124.1	MA0124.1	0.757
MA0125.1	MA0125.1	0.205
MA0131.1	MA0131.1	0.895
MA0135.1	MA0135.1	0.0785
MA0136.1	MA0136.1	2.85012e-13
MA0137.2	MA0137.2	0.511
MA0138.2	MA0138.2	0.108
MA0139.1	MA0139.1	0.795
MA0140.1	MA0140.1	0.0449
MA0141.1	MA0141.1	0.0214
MA0142.1	MA0142.1	0.138
MA0143.1	MA0143.1	0.129
MA0144.1	MA0144.1	0.375
MA0145.1	MA0145.1	0.141
MA0146.1	MA0146.1	0.0247
MA0147.1	MA0147.1	0.535
MA0148.1	MA0148.1	0.138
MA0149.1	MA0149.1	0.0681
MA0150.1	MA0150.1	4.57065e-4
MA0152.1	MA0152.1	0.494
MA0153.1	MA0153.1	0.364
MA0154.1	MA0154.1	0.0746
MA0155.1	MA0155.1	0.306
MA0156.1	MA0156.1	1.33623e-8
MA0157.1	MA0157.1	0.92
MA0159.1	MA0159.1	0.00534
MA0160.1	MA0160.1	0.106
MA0162.1	MA0162.1	0.101
MA0163.1	MA0163.1	2.80036e-4
MA0164.1	MA0164.1	0.809
MA0258.1	MA0258.1	0.0442
MA0259.1	MA0259.1	0.967

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13799

Novel motif	Logo	P-value
1	1	0.0791
10	10	0.073
100	100	0.404
101	101	0.677
102	102	0.551
103	103	0.0538
104	104	0.0625
105	105	0.121
106	106	0.00472
107	107	0.0227
108	108	0.978
109	109	9.90449e-4
11	11	0.0195
110	110	0.0845
111	111	0.372
112	112	0.698
113	113	0.316
114	114	0.271
115	115	0.759
116	116	0.139
117	117	0.00916
118	118	0.248
119	119	0.481
12	12	0.748
120	120	0.176
121	121	0.343
122	122	0.674
123	123	0.627
124	124	0.2
125	125	0.559
126	126	0.047
127	127	0.586
128	128	0.165
129	129	0.597
13	13	7.009e-4
130	130	0.13
131	131	0.0946
132	132	0.91
133	133	0.0238
134	134	0.516
135	135	0.415
136	136	7.97203e-4
137	137	0.348
138	138	0.83
139	139	0.266
14	14	0.615
140	140	0.676
141	141	0.837
142	142	0.394
143	143	0.0731
144	144	0.875
145	145	0.096
146	146	0.391
147	147	0.885
148	148	0.0306
149	149	0.123
15	15	0.0718
150	150	0.171
151	151	0.668
152	152	0.0135
153	153	0.99
154	154	0.706
155	155	0.426
156	156	0.927
157	157	0.343
158	158	0.0714
159	159	0.0328
16	16	0.0794
160	160	0.201
161	161	0.282
162	162	0.819
163	163	0.982
164	164	0.0218
165	165	0.0326
166	166	0.645
167	167	0.963
168	168	0.516
169	169	0.0228
17	17	0.0764
18	18	0.253
19	19	0.29
2	2	0.783
20	20	0.156
21	21	0.024
22	22	0.173
23	23	0.195
24	24	0.0418
25	25	0.54
26	26	4.09607e-5
27	27	0.841
28	28	0.869
29	29	0.0296
3	3	0.0502
30	30	0.964
31	31	0.962
32	32	0.0251
33	33	0.0594
34	34	0.598
35	35	0.88
36	36	0.325
37	37	0.0242
38	38	0.368
39	39	0.118
4	4	0.933
40	40	0.0598
41	41	0.452
42	42	0.359
43	43	0.128
44	44	0.178
45	45	0.722
46	46	0.0571
47	47	0.0805
48	48	0.0463
49	49	0.274
5	5	0.795
50	50	0.164
51	51	0.496
52	52	0.242
53	53	0.913
54	54	0.364
55	55	0.606
56	56	0.329
57	57	0.39
58	58	0.459
59	59	0.0494
6	6	0.816
60	60	0.0172
61	61	0.0646
62	62	0.231
63	63	0.083
64	64	0.401
65	65	0.294
66	66	0.252
67	67	0.324
68	68	0.326
69	69	0.337
7	7	0.0505
70	70	0.013
71	71	0.0128
72	72	0.259
73	73	0.00901
74	74	0.868
75	75	0.0526
76	76	0.418
77	77	0.0582
78	78	0.0218
79	79	0.346
8	8	0.0242
80	80	0.202
81	81	0.535
82	82	0.805
83	83	0.119
84	84	0.544
85	85	0.122
86	86	0.24
87	87	2.38143e-4
88	88	0.847
89	89	0.274
9	9	0.398
90	90	0.298
91	91	0.98
92	92	0.702
93	93	0.398
94	94	0.414
95	95	0.00769
96	96	0.898
97	97	0.686
98	98	0.721
99	99	0.228

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13799

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
FF:0010083 human cerebellum - adult sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0002037 (cerebellum)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002680 (regional part of metencephalon)
0002616 (regional part of brain)
0004733 (segmental subdivision of hindbrain)
0004732 (segmental subdivision of nervous system)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001895 (metencephalon)
0002028 (hindbrain)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010083 (human cerebellum - adult sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006215 (rhombic lip)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|id=FF:10173-103C2
+|DRA_sample_Accession=CAGE@SAMD00005550
-|name=cerebellum - adult, donor10196
+|accession_numbers=CAGE;DRX008631;DRR009503;DRZ000928;DRZ002313;DRZ012278;DRZ013663
-|sample_id=10173
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0002037,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000063,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002680,UBERON:0002616,UBERON:0004733,UBERON:0004732,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001895,UBERON:0002028
-|rna_tube_id=103C2
-|rna_box=103
-|rna_position=C2
-|sample_cell_lot=NA
-|sample_cell_catalog=NA
-|sample_company=
-|rna_lot_number=
-|rna_catalog_number=
-|sample_species=Human (Homo sapiens)
-|sample_strain=
-|sample_dev_stage=
-|sample_tissue=cerebellum
-|sample_donor(cell lot)=donor: 10196
-|sample_sex=female
-|sample_age=60
-|sample_ethnicity=
-|rna_rin=
-|rna_od260/230=2.3
-|rna_od260/280=2.05
-|sample_cell_type=CELL MIXTURE - tissue sample
-|sample_cell_line=
-|sample_collaboration=Peter Heutink
-|sample_experimental_condition=
-|sample_disease=
-|rna_sample_type=total RNA
-|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
-|rna_weight_ug=42.66825
-|rna_concentration=0.56891
-|sample_note=
-|profile_hcage=CNhs13799,LSID1086,release014,COMPLETED
-|profile_cagescan=
-|profile_srnaseq=
-|profile_rnaseq=
 |ancestors_in_cell_lineage_facet=
-|ancestors_in_anatomy_facet=
 |ancestors_in_disease_facet=
-|sample_description=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010083
+|comment=
+|created_by=
+|creation_date=
+|data_phase=2
+|datafreeze_phase=2
+|def=
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 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 66: / Line 41: @@
 |fonse_treatment=
 |fonse_treatment_closure=
-|top_motifs=
-|comment=
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-|def=
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+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/cerebellum%2520-%2520adult%252c%2520donor10196.CNhs13799.10173-103C2.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/cerebellum%2520-%2520adult%252c%2520donor10196.CNhs13799.10173-103C2.hg19.nobarcode.rdna.fa.gz
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+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10173
+|name=cerebellum - adult, donor10196
 |namespace=
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+|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
+|rna_lot_number=
+|rna_od260/230=2.3
+|rna_od260/280=2.05
+|rna_position=C2
+|rna_rin=
+|rna_sample_type=total RNA
+|rna_tube_id=103C2
+|rna_weight_ug=42.66825
+|sample_age=60
+|sample_category=tissues
+|sample_cell_catalog=NA
+|sample_cell_line=
+|sample_cell_lot=NA
+|sample_cell_type=CELL MIXTURE - tissue sample
+|sample_collaboration=Peter Heutink
+|sample_company=
+|sample_description=
+|sample_dev_stage=
+|sample_disease=
+|sample_donor(cell lot)=donor: 10196
+|sample_ethnicity=
+|sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.26401371014867e-229!GO:0043226;organelle;3.8681586375138e-142!GO:0043229;intracellular organelle;2.028201406704e-141!GO:0043227;membrane-bound organelle;2.96417552698594e-136!GO:0043231;intracellular membrane-bound organelle;5.70533913480171e-136!GO:0005737;cytoplasm;3.07668301812797e-128!GO:0044444;cytoplasmic part;5.7907640985542e-85!GO:0044422;organelle part;4.97865244629208e-73!GO:0044446;intracellular organelle part;5.56765034965326e-72!GO:0032991;macromolecular complex;7.45600728825179e-67!GO:0005634;nucleus;1.32332253717434e-55!GO:0005515;protein binding;3.00748758237653e-52!GO:0003723;RNA binding;1.75516700851666e-47!GO:0043170;macromolecule metabolic process;4.19889902202628e-47!GO:0044238;primary metabolic process;3.85624237055974e-46!GO:0044237;cellular metabolic process;4.28585489865847e-46!GO:0030529;ribonucleoprotein complex;4.73334464421435e-44!GO:0016043;cellular component organization and biogenesis;5.38269022589557e-44!GO:0044428;nuclear part;2.32808186136284e-43!GO:0033036;macromolecule localization;2.32353575521728e-42!GO:0015031;protein transport;6.21991056264651e-41!GO:0043233;organelle lumen;1.34139224009086e-38!GO:0031974;membrane-enclosed lumen;1.34139224009086e-38!GO:0005739;mitochondrion;1.9356116085337e-38!GO:0008104;protein localization;7.12771531102775e-38!GO:0045184;establishment of protein localization;3.18187330528781e-37!GO:0043234;protein complex;3.58183523327129e-37!GO:0016071;mRNA metabolic process;7.65553289650795e-34!GO:0043283;biopolymer metabolic process;1.00603025403279e-33!GO:0006396;RNA processing;2.05608894277465e-33!GO:0031090;organelle membrane;7.3435129070695e-33!GO:0010467;gene expression;8.96254786324012e-32!GO:0046907;intracellular transport;3.42043360424662e-31!GO:0008380;RNA splicing;9.20422942795074e-29!GO:0006397;mRNA processing;1.92814035217288e-28!GO:0051649;establishment of cellular localization;6.16091471354276e-27!GO:0044429;mitochondrial part;9.09393667552274e-27!GO:0051641;cellular localization;1.09430552380763e-26!GO:0031967;organelle envelope;1.09430552380763e-26!GO:0031975;envelope;1.36025204511604e-26!GO:0031981;nuclear lumen;1.0766109027308e-25!GO:0006886;intracellular protein transport;1.91977411566621e-25!GO:0019538;protein metabolic process;4.59952898958493e-25!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.95237921514485e-24!GO:0005840;ribosome;3.71350820814728e-22!GO:0016192;vesicle-mediated transport;4.00353810329493e-22!GO:0044260;cellular macromolecule metabolic process;8.07152207031621e-22!GO:0044267;cellular protein metabolic process;1.0403883975195e-21!GO:0006996;organelle organization and biogenesis;1.4595506875239e-21!GO:0005829;cytosol;2.35460032408731e-20!GO:0006412;translation;3.52553538701465e-20!GO:0006119;oxidative phosphorylation;5.3554200647914e-20!GO:0065003;macromolecular complex assembly;2.00850225103975e-19!GO:0003676;nucleic acid binding;3.44835321814523e-19!GO:0016070;RNA metabolic process;4.3023665465419e-19!GO:0005654;nucleoplasm;6.01125847442073e-19!GO:0005681;spliceosome;1.69386690503329e-18!GO:0003735;structural constituent of ribosome;1.7804506458801e-18!GO:0006512;ubiquitin cycle;2.98079966692168e-18!GO:0022607;cellular component assembly;1.01542328342965e-17!GO:0005740;mitochondrial envelope;1.26246563625223e-17!GO:0019866;organelle inner membrane;1.26780572766382e-17!GO:0031966;mitochondrial membrane;1.64959487375361e-17!GO:0044451;nucleoplasm part;3.24068621884204e-17!GO:0000166;nucleotide binding;5.76564833533075e-17!GO:0005743;mitochondrial inner membrane;3.322353893274e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.56476921910696e-16!GO:0017111;nucleoside-triphosphatase activity;5.17226054849636e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;5.44439102715022e-16!GO:0005794;Golgi apparatus;5.44439102715022e-16!GO:0016462;pyrophosphatase activity;5.44439102715022e-16!GO:0033279;ribosomal subunit;6.46466546246379e-16!GO:0044455;mitochondrial membrane part;2.98080326774014e-15!GO:0022613;ribonucleoprotein complex biogenesis and assembly;6.25275043623634e-15!GO:0016874;ligase activity;1.54240695832163e-14!GO:0009059;macromolecule biosynthetic process;3.67820681178022e-14!GO:0031982;vesicle;8.74257180866159e-14!GO:0005746;mitochondrial respiratory chain;2.5368042771436e-13!GO:0012505;endomembrane system;3.20304912793895e-13!GO:0050136;NADH dehydrogenase (quinone) activity;4.04712030756733e-13!GO:0003954;NADH dehydrogenase activity;4.04712030756733e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.04712030756733e-13!GO:0031410;cytoplasmic vesicle;4.69032896708609e-13!GO:0006457;protein folding;5.31770912650533e-13!GO:0009058;biosynthetic process;6.36077446408836e-13!GO:0016604;nuclear body;8.33227085461445e-13!GO:0048193;Golgi vesicle transport;8.38958286256247e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.36714339967715e-12!GO:0031988;membrane-bound vesicle;1.42664275926476e-12!GO:0045045;secretory pathway;1.77396291007917e-12!GO:0016607;nuclear speck;2.41823213414194e-12!GO:0043412;biopolymer modification;2.64626040600714e-12!GO:0044265;cellular macromolecule catabolic process;2.97825668709507e-12!GO:0043228;non-membrane-bound organelle;3.51707379465724e-12!GO:0043232;intracellular non-membrane-bound organelle;3.51707379465724e-12!GO:0022618;protein-RNA complex assembly;4.80053914279989e-12!GO:0008135;translation factor activity, nucleic acid binding;4.84742044373596e-12!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.85182647031038e-12!GO:0043687;post-translational protein modification;5.73138473596194e-12!GO:0006511;ubiquitin-dependent protein catabolic process;6.00546576069802e-12!GO:0044445;cytosolic part;6.47059207665234e-12!GO:0016023;cytoplasmic membrane-bound vesicle;7.82961351934736e-12!GO:0044249;cellular biosynthetic process;8.6966528644491e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;8.76083188992067e-12!GO:0031980;mitochondrial lumen;9.74697403836338e-12!GO:0005759;mitochondrial matrix;9.74697403836338e-12!GO:0019941;modification-dependent protein catabolic process;1.42138891738572e-11!GO:0043632;modification-dependent macromolecule catabolic process;1.42138891738572e-11!GO:0044257;cellular protein catabolic process;2.12564857205949e-11!GO:0030964;NADH dehydrogenase complex (quinone);2.30043839528782e-11!GO:0045271;respiratory chain complex I;2.30043839528782e-11!GO:0005747;mitochondrial respiratory chain complex I;2.30043839528782e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.99130771305999e-11!GO:0042773;ATP synthesis coupled electron transport;2.99130771305999e-11!GO:0006605;protein targeting;3.15481589850199e-11!GO:0032553;ribonucleotide binding;3.60623432232446e-11!GO:0032555;purine ribonucleotide binding;3.60623432232446e-11!GO:0006259;DNA metabolic process;5.18149328855513e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.02624557070363e-11!GO:0006464;protein modification process;6.06483783576451e-11!GO:0017076;purine nucleotide binding;2.44874886766845e-10!GO:0031965;nuclear membrane;2.5873778213216e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;4.60484779850962e-10!GO:0008134;transcription factor binding;6.19461806850667e-10!GO:0019829;cation-transporting ATPase activity;7.7649178041477e-10!GO:0008565;protein transporter activity;9.23896917249786e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.19638262041629e-09!GO:0048770;pigment granule;2.67821157423374e-09!GO:0042470;melanosome;2.67821157423374e-09!GO:0051082;unfolded protein binding;3.13021916246634e-09!GO:0006323;DNA packaging;3.18569445376307e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;3.27999058533586e-09!GO:0000375;RNA splicing, via transesterification reactions;3.27999058533586e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.27999058533586e-09!GO:0005635;nuclear envelope;3.4008807285135e-09!GO:0043285;biopolymer catabolic process;3.69215957631372e-09!GO:0006913;nucleocytoplasmic transport;4.59564352880524e-09!GO:0006403;RNA localization;5.98209758066994e-09!GO:0009057;macromolecule catabolic process;7.2278569162224e-09!GO:0051169;nuclear transport;8.29105608259705e-09!GO:0030163;protein catabolic process;1.14251323394311e-08!GO:0050657;nucleic acid transport;1.21670429405428e-08!GO:0051236;establishment of RNA localization;1.21670429405428e-08!GO:0050658;RNA transport;1.21670429405428e-08!GO:0016568;chromatin modification;1.75794946726308e-08!GO:0016887;ATPase activity;1.90622052511956e-08!GO:0015934;large ribosomal subunit;2.12854278883629e-08!GO:0030135;coated vesicle;2.18550025905998e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.18886151356361e-08!GO:0015935;small ribosomal subunit;2.49011041686553e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;2.58379074659636e-08!GO:0003743;translation initiation factor activity;2.89179078935554e-08!GO:0044248;cellular catabolic process;3.03386391623304e-08!GO:0032940;secretion by cell;3.20836621531099e-08!GO:0004842;ubiquitin-protein ligase activity;3.20836621531099e-08!GO:0008639;small protein conjugating enzyme activity;3.25721949766292e-08!GO:0032559;adenyl ribonucleotide binding;3.93247813455702e-08!GO:0006413;translational initiation;4.16500698481228e-08!GO:0015986;ATP synthesis coupled proton transport;5.52295759279336e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.52295759279336e-08!GO:0005524;ATP binding;5.52586212747581e-08!GO:0019787;small conjugating protein ligase activity;5.53138152642425e-08!GO:0006446;regulation of translational initiation;7.55435062804387e-08!GO:0000502;proteasome complex (sensu Eukaryota);8.65175933736708e-08!GO:0044431;Golgi apparatus part;1.33848215200329e-07!GO:0051186;cofactor metabolic process;1.49075873042447e-07!GO:0042623;ATPase activity, coupled;1.52926577523094e-07!GO:0015630;microtubule cytoskeleton;1.58137217698347e-07!GO:0050794;regulation of cellular process;1.59093354478241e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.76725047352938e-07!GO:0008270;zinc ion binding;1.95333654420893e-07!GO:0044453;nuclear membrane part;1.97453863505536e-07!GO:0030554;adenyl nucleotide binding;2.36883347433977e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.07972641566754e-07!GO:0005643;nuclear pore;3.18369541362618e-07!GO:0003924;GTPase activity;3.75135981280822e-07!GO:0006793;phosphorus metabolic process;5.10926795476075e-07!GO:0006796;phosphate metabolic process;5.10926795476075e-07!GO:0006810;transport;5.18510732972776e-07!GO:0051276;chromosome organization and biogenesis;5.21378606313043e-07!GO:0051028;mRNA transport;5.28717208335402e-07!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.81574299364672e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.16084912702747e-07!GO:0008287;protein serine/threonine phosphatase complex;6.6523166792525e-07!GO:0006461;protein complex assembly;7.18622043174933e-07!GO:0003712;transcription cofactor activity;7.47358259730417e-07!GO:0015078;hydrogen ion transmembrane transporter activity;8.71384613574502e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.93477565037804e-07!GO:0015631;tubulin binding;1.06988657021316e-06!GO:0005768;endosome;1.18379952979132e-06!GO:0005730;nucleolus;1.21268683425421e-06!GO:0019717;synaptosome;1.23551528868256e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.24401812220989e-06!GO:0006754;ATP biosynthetic process;1.24828101006777e-06!GO:0006753;nucleoside phosphate metabolic process;1.24828101006777e-06!GO:0048475;coated membrane;1.6416955954715e-06!GO:0030117;membrane coat;1.6416955954715e-06!GO:0050789;regulation of biological process;1.94921739057063e-06!GO:0016881;acid-amino acid ligase activity;2.29851147437497e-06!GO:0006732;coenzyme metabolic process;4.10514120610017e-06!GO:0019222;regulation of metabolic process;5.50455946678105e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.50455946678105e-06!GO:0015399;primary active transmembrane transporter activity;5.50455946678105e-06!GO:0008017;microtubule binding;5.59934935385552e-06!GO:0046034;ATP metabolic process;6.31983721997426e-06!GO:0005083;small GTPase regulator activity;7.83591147413603e-06!GO:0009060;aerobic respiration;7.94610695657459e-06!GO:0016310;phosphorylation;8.47314257473432e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;8.90368323711348e-06!GO:0004386;helicase activity;9.41066103048394e-06!GO:0005761;mitochondrial ribosome;1.02015272778458e-05!GO:0000313;organellar ribosome;1.02015272778458e-05!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.02505250544711e-05!GO:0008092;cytoskeletal protein binding;1.02505250544711e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.40043767881723e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.40043767881723e-05!GO:0009142;nucleoside triphosphate biosynthetic process;1.68493381085527e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.68493381085527e-05!GO:0017038;protein import;1.74170091854284e-05!GO:0000139;Golgi membrane;1.80654705152775e-05!GO:0032446;protein modification by small protein conjugation;1.8771204798784e-05!GO:0007264;small GTPase mediated signal transduction;2.06671865001159e-05!GO:0045259;proton-transporting ATP synthase complex;2.26936896176821e-05!GO:0019899;enzyme binding;2.27971409664282e-05!GO:0045333;cellular respiration;2.42048729942523e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.6212152354999e-05!GO:0048471;perinuclear region of cytoplasm;2.65909539143045e-05!GO:0006752;group transfer coenzyme metabolic process;3.04287608164465e-05!GO:0043492;ATPase activity, coupled to movement of substances;3.04957482644959e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.09642815259094e-05!GO:0009144;purine nucleoside triphosphate metabolic process;3.09642815259094e-05!GO:0051234;establishment of localization;3.27264114117154e-05!GO:0005769;early endosome;3.34906143817813e-05!GO:0009199;ribonucleoside triphosphate metabolic process;3.511376268108e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.03733857432186e-05!GO:0046914;transition metal ion binding;4.13723088800348e-05!GO:0006974;response to DNA damage stimulus;4.18212644069865e-05!GO:0009150;purine ribonucleotide metabolic process;4.27783153309876e-05!GO:0046930;pore complex;4.29869068068713e-05!GO:0009141;nucleoside triphosphate metabolic process;4.40794577827008e-05!GO:0009152;purine ribonucleotide biosynthetic process;4.40794577827008e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;4.4276485491294e-05!GO:0000245;spliceosome assembly;4.66298685014265e-05!GO:0005525;GTP binding;4.9405233338715e-05!GO:0006163;purine nucleotide metabolic process;4.9405233338715e-05!GO:0045786;negative regulation of progression through cell cycle;4.9405233338715e-05!GO:0006333;chromatin assembly or disassembly;5.04019535819661e-05!GO:0009055;electron carrier activity;5.0843628326828e-05!GO:0065002;intracellular protein transport across a membrane;5.09421283027703e-05!GO:0006366;transcription from RNA polymerase II promoter;5.12779343273436e-05!GO:0016567;protein ubiquitination;5.27660934684614e-05!GO:0006164;purine nucleotide biosynthetic process;5.33497108147014e-05!GO:0016044;membrane organization and biogenesis;5.47680623512022e-05!GO:0022890;inorganic cation transmembrane transporter activity;5.47859455980779e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;5.50606412001478e-05!GO:0005874;microtubule;5.69622683708138e-05!GO:0030120;vesicle coat;5.69622683708138e-05!GO:0030662;coated vesicle membrane;5.69622683708138e-05!GO:0030136;clathrin-coated vesicle;6.48565839308581e-05!GO:0007010;cytoskeleton organization and biogenesis;6.67506620937544e-05!GO:0009056;catabolic process;8.59089114482422e-05!GO:0005783;endoplasmic reticulum;9.21268818609203e-05!GO:0044440;endosomal part;9.72777736157919e-05!GO:0010008;endosome membrane;9.72777736157919e-05!GO:0043566;structure-specific DNA binding;9.84809667038706e-05!GO:0051168;nuclear export;0.000102217820175353!GO:0003713;transcription coactivator activity;0.00011429146889258!GO:0000151;ubiquitin ligase complex;0.000128876287796127!GO:0009259;ribonucleotide metabolic process;0.000145712000435624!GO:0006350;transcription;0.000152604905098576!GO:0009109;coenzyme catabolic process;0.000157837284863157!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000177795553716759!GO:0051179;localization;0.000180399803299108!GO:0051188;cofactor biosynthetic process;0.000181490600016406!GO:0006099;tricarboxylic acid cycle;0.000183345023019839!GO:0046356;acetyl-CoA catabolic process;0.000183345023019839!GO:0048523;negative regulation of cellular process;0.000184385886721605!GO:0030695;GTPase regulator activity;0.000214228436843495!GO:0006606;protein import into nucleus;0.000215396281445488!GO:0043005;neuron projection;0.000219405203574499!GO:0051170;nuclear import;0.000229927701895768!GO:0006613;cotranslational protein targeting to membrane;0.000254097560871652!GO:0005770;late endosome;0.000271630101836723!GO:0006084;acetyl-CoA metabolic process;0.000276331210245727!GO:0008026;ATP-dependent helicase activity;0.000280203430690798!GO:0003724;RNA helicase activity;0.00029547728969206!GO:0009260;ribonucleotide biosynthetic process;0.000299725099306801!GO:0006281;DNA repair;0.000302856744316527!GO:0051128;regulation of cellular component organization and biogenesis;0.000313678664911432!GO:0016197;endosome transport;0.000323537611708666!GO:0005905;coated pit;0.000327747804601088!GO:0016564;transcription repressor activity;0.000337829676749697!GO:0007049;cell cycle;0.000349306656504624!GO:0031323;regulation of cellular metabolic process;0.000366007668516475!GO:0005798;Golgi-associated vesicle;0.000373784036240291!GO:0043623;cellular protein complex assembly;0.000381673898370671!GO:0048489;synaptic vesicle transport;0.000420081687230666!GO:0031072;heat shock protein binding;0.000493766355468092!GO:0030036;actin cytoskeleton organization and biogenesis;0.000516436711071022!GO:0051187;cofactor catabolic process;0.000521996528539058!GO:0003729;mRNA binding;0.000534771054053837!GO:0032561;guanyl ribonucleotide binding;0.000536052543778139!GO:0019001;guanyl nucleotide binding;0.000536052543778139!GO:0005813;centrosome;0.00056355155150406!GO:0010468;regulation of gene expression;0.000592351263659935!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00059588199331085!GO:0004812;aminoacyl-tRNA ligase activity;0.00059588199331085!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00059588199331085!GO:0030532;small nuclear ribonucleoprotein complex;0.000632227729554413!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000656962996494957!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000744176224925398!GO:0042254;ribosome biogenesis and assembly;0.000759322002368908!GO:0009108;coenzyme biosynthetic process;0.000789640454078398!GO:0006402;mRNA catabolic process;0.000795470935632557!GO:0043038;amino acid activation;0.000811757284022139!GO:0006418;tRNA aminoacylation for protein translation;0.000811757284022139!GO:0043039;tRNA aminoacylation;0.000811757284022139!GO:0003697;single-stranded DNA binding;0.000943467324273689!GO:0065007;biological regulation;0.000974574743877316!GO:0006892;post-Golgi vesicle-mediated transport;0.00106910009055601!GO:0030118;clathrin coat;0.00106910009055601!GO:0008654;phospholipid biosynthetic process;0.00107657636421489!GO:0005815;microtubule organizing center;0.00112752843104551!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00116158613273973!GO:0032774;RNA biosynthetic process;0.00116158613273973!GO:0051246;regulation of protein metabolic process;0.00119831114751597!GO:0006351;transcription, DNA-dependent;0.00127946660606003!GO:0051726;regulation of cell cycle;0.00130389675485115!GO:0031901;early endosome membrane;0.00138550634902038!GO:0006891;intra-Golgi vesicle-mediated transport;0.00157590907679246!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00186260046100284!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00201942623255558!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00201942623255558!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00201942623255558!GO:0006897;endocytosis;0.00204893573139582!GO:0010324;membrane invagination;0.00204893573139582!GO:0008022;protein C-terminus binding;0.00205072475019307!GO:0031252;leading edge;0.00205091207887721!GO:0016363;nuclear matrix;0.00209591831038301!GO:0022406;membrane docking;0.00223947565070723!GO:0048278;vesicle docking;0.00223947565070723!GO:0004221;ubiquitin thiolesterase activity;0.00227275995005696!GO:0006607;NLS-bearing substrate import into nucleus;0.00231545527092761!GO:0008601;protein phosphatase type 2A regulator activity;0.00233753761071169!GO:0000159;protein phosphatase type 2A complex;0.00235971301662053!GO:0030425;dendrite;0.00237274379966375!GO:0006612;protein targeting to membrane;0.00239128221504333!GO:0048519;negative regulation of biological process;0.00246639393283985!GO:0045449;regulation of transcription;0.00247030707447669!GO:0004674;protein serine/threonine kinase activity;0.00255763649756617!GO:0000074;regulation of progression through cell cycle;0.0026174966526313!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00261943699459497!GO:0019783;small conjugating protein-specific protease activity;0.00264204618939212!GO:0065004;protein-DNA complex assembly;0.002656908675351!GO:0008021;synaptic vesicle;0.00268396161503399!GO:0005793;ER-Golgi intermediate compartment;0.00287132805463676!GO:0046467;membrane lipid biosynthetic process;0.00296996981548946!GO:0044432;endoplasmic reticulum part;0.00322733987412607!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00326156952962805!GO:0006904;vesicle docking during exocytosis;0.00343523612046819!GO:0030133;transport vesicle;0.00363802527293455!GO:0016050;vesicle organization and biogenesis;0.00372567663347643!GO:0004843;ubiquitin-specific protease activity;0.00379027698432678!GO:0007269;neurotransmitter secretion;0.00385067644031112!GO:0051087;chaperone binding;0.00400370224597271!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00402529363742985!GO:0030029;actin filament-based process;0.00414511062654645!GO:0006364;rRNA processing;0.00425084312333318!GO:0003714;transcription corepressor activity;0.00425454442224634!GO:0030384;phosphoinositide metabolic process;0.0045782519725039!GO:0009892;negative regulation of metabolic process;0.0045782519725039!GO:0006355;regulation of transcription, DNA-dependent;0.00482367878551493!GO:0030742;GTP-dependent protein binding;0.00482495217157274!GO:0016740;transferase activity;0.00484554417862821!GO:0008186;RNA-dependent ATPase activity;0.0051429353443478!GO:0012506;vesicle membrane;0.00519996379945028!GO:0031124;mRNA 3'-end processing;0.00521560681360622!GO:0000059;protein import into nucleus, docking;0.0052950529322503!GO:0051427;hormone receptor binding;0.00535045849028693!GO:0030427;site of polarized growth;0.00540482707301152!GO:0030426;growth cone;0.00553639812794725!GO:0005938;cell cortex;0.00584301994461789!GO:0003746;translation elongation factor activity;0.00590092580538709!GO:0019904;protein domain specific binding;0.00603908526060081!GO:0006414;translational elongation;0.00629700305072242!GO:0051056;regulation of small GTPase mediated signal transduction;0.00678371911529997!GO:0003711;transcription elongation regulator activity;0.00696475710765665!GO:0006650;glycerophospholipid metabolic process;0.00702008050133141!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00703977979684018!GO:0004667;prostaglandin-D synthase activity;0.00703977979684018!GO:0050802;circadian sleep/wake cycle, sleep;0.00703977979684018!GO:0022410;circadian sleep/wake cycle process;0.00703977979684018!GO:0042749;regulation of circadian sleep/wake cycle;0.00703977979684018!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.00722285336396603!GO:0006399;tRNA metabolic process;0.00726701936783366!GO:0016072;rRNA metabolic process;0.00728186570752142!GO:0006383;transcription from RNA polymerase III promoter;0.00734329972253453!GO:0006338;chromatin remodeling;0.00798496051473015!GO:0030132;clathrin coat of coated pit;0.00859285848343688!GO:0016481;negative regulation of transcription;0.00876248678992516!GO:0035257;nuclear hormone receptor binding;0.00894749673335505!GO:0007399;nervous system development;0.00900848816011871!GO:0016563;transcription activator activity;0.00931963770278706!GO:0006260;DNA replication;0.00934345512288312!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0094279826143697!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00956312336601803!GO:0003690;double-stranded DNA binding;0.00982922484194624!GO:0048500;signal recognition particle;0.00987165281288129!GO:0016301;kinase activity;0.00997596377265717!GO:0051540;metal cluster binding;0.00997596377265717!GO:0051536;iron-sulfur cluster binding;0.00997596377265717!GO:0048487;beta-tubulin binding;0.00997596377265717!GO:0019902;phosphatase binding;0.0102618852876171!GO:0006730;one-carbon compound metabolic process;0.0103268701290325!GO:0006818;hydrogen transport;0.0104289614838733!GO:0005868;cytoplasmic dynein complex;0.0104522491394728!GO:0030137;COPI-coated vesicle;0.0105244015152714!GO:0005789;endoplasmic reticulum membrane;0.010697654751317!GO:0000209;protein polyubiquitination;0.0108731331574189!GO:0004722;protein serine/threonine phosphatase activity;0.0110462287622205!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0112208132594053!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0113339385011513!GO:0055083;monovalent inorganic anion homeostasis;0.0113339385011513!GO:0055064;chloride ion homeostasis;0.0113339385011513!GO:0030644;cellular chloride ion homeostasis;0.0113339385011513!GO:0022402;cell cycle process;0.0113339385011513!GO:0030258;lipid modification;0.0122221120598069!GO:0006405;RNA export from nucleus;0.0126999550421121!GO:0051261;protein depolymerization;0.0127451175974777!GO:0043209;myelin sheath;0.0127954162634918!GO:0015992;proton transport;0.0127954162634918!GO:0007265;Ras protein signal transduction;0.0127954162634918!GO:0008154;actin polymerization and/or depolymerization;0.0130037035240006!GO:0005773;vacuole;0.013022486566106!GO:0004004;ATP-dependent RNA helicase activity;0.0131404946362091!GO:0031123;RNA 3'-end processing;0.0132775908136075!GO:0016790;thiolester hydrolase activity;0.0135733600758025!GO:0051920;peroxiredoxin activity;0.0136498770908105!GO:0015980;energy derivation by oxidation of organic compounds;0.0136677285515237!GO:0001578;microtubule bundle formation;0.0138975032059296!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0144583115558508!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0146079142435713!GO:0033673;negative regulation of kinase activity;0.0146113911228283!GO:0006469;negative regulation of protein kinase activity;0.0146113911228283!GO:0008312;7S RNA binding;0.0148756109315935!GO:0006611;protein export from nucleus;0.0151110553942268!GO:0044433;cytoplasmic vesicle part;0.0152902043499931!GO:0007019;microtubule depolymerization;0.0156468523228587!GO:0030658;transport vesicle membrane;0.0157678359936565!GO:0048167;regulation of synaptic plasticity;0.015814380143454!GO:0045892;negative regulation of transcription, DNA-dependent;0.0160027695521778!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0160110175654774!GO:0019887;protein kinase regulator activity;0.0161909988808565!GO:0045603;positive regulation of endothelial cell differentiation;0.0166553010273821!GO:0006401;RNA catabolic process;0.0168704233686689!GO:0045055;regulated secretory pathway;0.0168704233686689!GO:0031324;negative regulation of cellular metabolic process;0.0174685773278866!GO:0006895;Golgi to endosome transport;0.0174685773278866!GO:0051539;4 iron, 4 sulfur cluster binding;0.0175018626586313!GO:0016584;nucleosome positioning;0.0175018626586313!GO:0005667;transcription factor complex;0.0179104160104356!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0179122281688456!GO:0008139;nuclear localization sequence binding;0.0180222121685581!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0180222121685581!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0180222121685581!GO:0000314;organellar small ribosomal subunit;0.0180837828798597!GO:0005763;mitochondrial small ribosomal subunit;0.0180837828798597!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0180837828798597!GO:0045047;protein targeting to ER;0.0180837828798597!GO:0016311;dephosphorylation;0.0183936133499659!GO:0035258;steroid hormone receptor binding;0.0193966910235231!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0198923271113956!GO:0003899;DNA-directed RNA polymerase activity;0.0203401547654796!GO:0016585;chromatin remodeling complex;0.0204833875754847!GO:0008047;enzyme activator activity;0.0205041898812911!GO:0005048;signal sequence binding;0.0205041898812911!GO:0009719;response to endogenous stimulus;0.0206531890736674!GO:0030027;lamellipodium;0.0209499470156191!GO:0032259;methylation;0.0212625248943862!GO:0005791;rough endoplasmic reticulum;0.0217367986442322!GO:0044448;cell cortex part;0.0220423932991042!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.022146737988511!GO:0007030;Golgi organization and biogenesis;0.0221675171384753!GO:0003725;double-stranded RNA binding;0.0230791996769658!GO:0050811;GABA receptor binding;0.0231677584282522!GO:0019894;kinesin binding;0.0231864258298731!GO:0046488;phosphatidylinositol metabolic process;0.0232564091687084!GO:0030119;AP-type membrane coat adaptor complex;0.0235744065561695!GO:0007034;vacuolar transport;0.0248507349785511!GO:0030134;ER to Golgi transport vesicle;0.0249638709507018!GO:0030660;Golgi-associated vesicle membrane;0.025094982668834!GO:0050803;regulation of synapse structure and activity;0.0254703927842563!GO:0032011;ARF protein signal transduction;0.0257706954209399!GO:0032012;regulation of ARF protein signal transduction;0.0257706954209399!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0259641717075358!GO:0005741;mitochondrial outer membrane;0.026094161760951!GO:0035035;histone acetyltransferase binding;0.0266998234078848!GO:0043086;negative regulation of catalytic activity;0.026878710850484!GO:0043021;ribonucleoprotein binding;0.026878710850484!GO:0008250;oligosaccharyl transferase complex;0.0269445063318603!GO:0005839;proteasome core complex (sensu Eukaryota);0.0269674095940977!GO:0001508;regulation of action potential;0.0269944066728649!GO:0051789;response to protein stimulus;0.0270627808815153!GO:0006986;response to unfolded protein;0.0270627808815153!GO:0030127;COPII vesicle coat;0.0270955280274183!GO:0012507;ER to Golgi transport vesicle membrane;0.0270955280274183!GO:0007017;microtubule-based process;0.0287534938367274!GO:0030131;clathrin adaptor complex;0.0291912905977256!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0294763138096982!GO:0019208;phosphatase regulator activity;0.0295729186342565!GO:0016859;cis-trans isomerase activity;0.0299869199043085!GO:0006887;exocytosis;0.0304779157111823!GO:0051348;negative regulation of transferase activity;0.0307179445210255!GO:0001505;regulation of neurotransmitter levels;0.0307238924210004!GO:0016836;hydro-lyase activity;0.0309391468007351!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0311132596442422!GO:0006643;membrane lipid metabolic process;0.0314532283460534!GO:0019207;kinase regulator activity;0.0314900350848838!GO:0031902;late endosome membrane;0.031615824146337!GO:0004183;carboxypeptidase E activity;0.031644908968358!GO:0030070;insulin processing;0.031644908968358!GO:0043414;biopolymer methylation;0.0317112501623601!GO:0005762;mitochondrial large ribosomal subunit;0.0319478845044917!GO:0000315;organellar large ribosomal subunit;0.0319478845044917!GO:0007242;intracellular signaling cascade;0.032199342414558!GO:0016791;phosphoric monoester hydrolase activity;0.0322143321790241!GO:0004721;phosphoprotein phosphatase activity;0.0323523852025169!GO:0005869;dynactin complex;0.0326400412841588!GO:0046839;phospholipid dephosphorylation;0.0336507136151048!GO:0046474;glycerophospholipid biosynthetic process;0.0342143049739486!GO:0018065;protein-cofactor linkage;0.0350163020799496!GO:0030659;cytoplasmic vesicle membrane;0.0353951775557119!GO:0003682;chromatin binding;0.0354614707334168!GO:0031371;ubiquitin conjugating enzyme complex;0.0355410098317216!GO:0046489;phosphoinositide biosynthetic process;0.0362498516771297!GO:0007004;telomere maintenance via telomerase;0.036477531498592!GO:0005100;Rho GTPase activator activity;0.0375716599466952!GO:0005875;microtubule associated complex;0.0375716599466952!GO:0008180;signalosome;0.037985566700123!GO:0042585;germinal vesicle;0.0380017068660866!GO:0016579;protein deubiquitination;0.0382091686537596!GO:0042158;lipoprotein biosynthetic process;0.0387051859425062!GO:0003779;actin binding;0.0393325945003089!GO:0005096;GTPase activator activity;0.0393885895650667!GO:0007612;learning;0.0393892867330414!GO:0030663;COPI coated vesicle membrane;0.0393892867330414!GO:0030126;COPI vesicle coat;0.0393892867330414!GO:0046870;cadmium ion binding;0.0396853926912833!GO:0031114;regulation of microtubule depolymerization;0.0396853926912833!GO:0007026;negative regulation of microtubule depolymerization;0.0396853926912833!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0397705924539448!GO:0033043;regulation of organelle organization and biogenesis;0.0397705924539448!GO:0051252;regulation of RNA metabolic process;0.0399963426407046!GO:0005637;nuclear inner membrane;0.0413816070430207!GO:0008286;insulin receptor signaling pathway;0.0413981245950915!GO:0017016;Ras GTPase binding;0.0414549455327656!GO:0004860;protein kinase inhibitor activity;0.0415108086371813!GO:0030867;rough endoplasmic reticulum membrane;0.0427323421139449!GO:0016272;prefoldin complex;0.0431482161765244!GO:0016251;general RNA polymerase II transcription factor activity;0.0432886377948869!GO:0031497;chromatin assembly;0.043856235585744!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.043884535588411!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.043884535588411!GO:0015002;heme-copper terminal oxidase activity;0.043884535588411!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.043884535588411!GO:0004129;cytochrome-c oxidase activity;0.043884535588411!GO:0016569;covalent chromatin modification;0.043884535588411!GO:0004576;oligosaccharyl transferase activity;0.0441574565149198!GO:0030911;TPR domain binding;0.0454277018772002!GO:0006378;mRNA polyadenylation;0.0455389370503321!GO:0016779;nucleotidyltransferase activity;0.0455482263265369!GO:0006665;sphingolipid metabolic process;0.046725746570408!GO:0031968;organelle outer membrane;0.0467926096348173!GO:0046903;secretion;0.0472681973727349!GO:0005955;calcineurin complex;0.047342176271229!GO:0005086;ARF guanyl-nucleotide exchange factor activity;0.0473883012970345!GO:0042026;protein refolding;0.0475697741611725!GO:0004298;threonine endopeptidase activity;0.047782979980452!GO:0006470;protein amino acid dephosphorylation;0.0480594107003767!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0491732217448831
+|sample_id=10173
+|sample_note=
+|sample_sex=female
+|sample_species=Human (Homo sapiens)
+|sample_strain=
+|sample_tissue=cerebellum
+|top_motifs=FOXM1:3.85239463193;RORA:3.7877920876;DBP:3.53992084384;ARID5B:3.48874921133;AHR_ARNT_ARNT2:3.46577617539;REST:3.44382346658;ZFP161:3.38739608417;NFIX:3.06278193419;PAX4:2.858485899;CUX2:2.82900276003;PDX1:2.77687198663;ATF2:2.74345335923;MED-1{core}:2.73000233939;SMAD1..7,9:2.65242761028;MZF1:2.62571688748;POU6F1:2.59986477913;PAX6:2.54333200107;FOXQ1:2.36212585059;NRF1:2.31962035864;BREu{core}:2.31713444809;PRDM1:2.31666681183;STAT1,3:2.2659875222;SOX5:2.2373094326;ZBTB6:2.21592233105;ALX1:2.12675386738;MTE{core}:2.08120433657;GATA4:2.05663496074;NKX2-3_NKX2-5:2.03735881023;OCT4_SOX2{dimer}:2.0345895847;MYFfamily:1.99284315656;POU5F1:1.97466793199;NHLH1,2:1.90718350594;VSX1,2:1.90048796187;GTF2I:1.87467379903;MTF1:1.80923995674;RREB1:1.78972552404;TGIF1:1.77756414955;NFIL3:1.72929673934;GCM1,2:1.71680309367;RBPJ:1.66816488855;NKX3-2:1.63066233688;LMO2:1.58048375302;XBP1:1.57773316168;GFI1B:1.57443941865;CDC5L:1.562684361;POU3F1..4:1.52436554415;RFX2..5_RFXANK_RFXAP:1.52273385013;SOX2:1.45249086879;KLF4:1.43564543211;HIC1:1.39306905976;HOXA9_MEIS1:1.38445132317;AR:1.34678875566;ADNP_IRX_SIX_ZHX:1.33704478606;SOX{8,9,10}:1.32651141547;PRRX1,2:1.3238522501;SOX17:1.31410911119;LEF1_TCF7_TCF7L1,2:1.30639076646;HMGA1,2:1.27685400974;RFX1:1.25819806917;TFAP2B:1.25567671856;PATZ1:1.21233319226;NANOG:1.20458338648;SPZ1:1.1622631088;ZNF143:1.14757286755;MYOD1:1.13141613546;ONECUT1,2:1.12915394628;EGR1..3:1.12706115611;PAX8:1.08211705732;EVI1:1.00530477024;HAND1,2:0.995027603279;MEF2{A,B,C,D}:0.98946761648;TFDP1:0.968004971071;FOX{I1,J2}:0.949143796451;ZEB1:0.948101772099;JUN:0.944677178898;MAFB:0.940842004565;HOX{A4,D4}:0.937430906731;YY1:0.921032502293;CRX:0.913593591483;ESRRA:0.844814991987;FOX{D1,D2}:0.843071420766;GZF1:0.840474402461;ATF5_CREB3:0.837902614731;EP300:0.806314832988;SREBF1,2:0.804399699386;MAZ:0.801893914924;LHX3,4:0.797397515457;NR3C1:0.783749902871;FOX{F1,F2,J1}:0.783237697385;BPTF:0.698882892091;MYBL2:0.635688412238;NKX2-1,4:0.564372183948;CREB1:0.559673593576;AIRE:0.537056212899;FOXN1:0.521634506279;ATF6:0.517395037961;FOXO1,3,4:0.501203748824;PAX5:0.451676260051;NFY{A,B,C}:0.425221730053;POU1F1:0.420485351252;TLX1..3_NFIC{dimer}:0.414696117237;GFI1:0.359531404218;PAX2:0.358529298471;ZNF423:0.334754851221;TLX2:0.32413546784;ATF4:0.317252215532;IKZF2:0.31167127657;ZNF384:0.30601195408;TOPORS:0.29296119062;FOXP1:0.240315840291;HIF1A:0.237232291656;NFE2L1:0.202870191442;FOXP3:0.174562709807;SNAI1..3:0.146136162401;ZBTB16:0.126229293538;FOXA2:0.0852655137649;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.0486444270804;STAT5{A,B}:0.0283495678129;FOXL1:-0.0647348861598;SP1:-0.0835726570386;NKX3-1:-0.163817455682;GTF2A1,2:-0.204056268159;PAX3,7:-0.225928253211;ZIC1..3:-0.230328189166;PBX1:-0.268940764218;UFEwm:-0.304562235882;TEF:-0.31547242902;NR5A1,2:-0.326109191888;IRF7:-0.353320608382;ZNF238:-0.358062438516;NANOG{mouse}:-0.374824146999;HBP1_HMGB_SSRP1_UBTF:-0.390196839568;NFE2L2:-0.437784500666;TFAP2{A,C}:-0.471275685562;NKX6-1,2:-0.513834804353;XCPE1{core}:-0.542315990971;HNF4A_NR2F1,2:-0.553415776395;PITX1..3:-0.587409027535;SPIB:-0.59305426305;PAX1,9:-0.594180229337;T:-0.603868340289;FOSL2:-0.608128309862;SPI1:-0.612006266717;ESR1:-0.613403134127;HNF1A:-0.615185558334;E2F1..5:-0.654714781739;GATA6:-0.660634910231;IRF1,2:-0.704025598731;NFATC1..3:-0.709012409122;HOX{A6,A7,B6,B7}:-0.709873980944;CEBPA,B_DDIT3:-0.714805302038;NFE2:-0.817788646756;STAT2,4,6:-0.842757394337;HOX{A5,B5}:-0.84567029116;FOS_FOS{B,L1}_JUN{B,D}:-0.891050479757;DMAP1_NCOR{1,2}_SMARC:-0.908011511015;BACH2:-0.921122440559;EBF1:-0.930900604259;HLF:-0.99698043493;CDX1,2,4:-1.00889000359;NFKB1_REL_RELA:-1.02600192168;ELK1,4_GABP{A,B1}:-1.05344159536;ETS1,2:-1.05440049613;TEAD1:-1.12633190688;PPARG:-1.13628564934;RUNX1..3:-1.1578629081;HMX1:-1.1756225571;TFCP2:-1.20885130617;NR1H4:-1.24678388062;IKZF1:-1.27519307496;HES1:-1.28637997487;TP53:-1.34050823888;POU2F1..3:-1.34713898715;MYB:-1.39016184604;TAL1_TCF{3,4,12}:-1.46761493121;GLI1..3:-1.50996873222;RXR{A,B,G}:-1.53969654227;NR6A1:-1.55149985661;TFAP4:-1.58315740348;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.61079623898;ELF1,2,4:-1.62349766876;TBX4,5:-1.63011977757;FOXD3:-1.6632584482;HSF1,2:-1.69090052957;ALX4:-1.75434217916;RXRA_VDR{dimer}:-1.78114794746;TBP:-1.78523871184;bHLH_family:-1.78934591207;SRF:-2.07377647953;NKX2-2,8:-2.14712332256;ZNF148:-2.26106136089;EN1,2:-2.28549572316
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10173-103C2;search_select_hide=table117:FF:10173-103C2
 }}

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FF:10173-103C2: Difference between revisions

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Latest revision as of 12:25, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0