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{{f5samples
{{f5samples
|F5samples=
|DRA_sample_Accession=CAGE@SAMD00005382
|ancestors_in_anatomy_facet=UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000153,UBERON:0000161,UBERON:0000165,UBERON:0000166,UBERON:0000344,UBERON:0000464,UBERON:0000465,UBERON:0000466,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000925,UBERON:0000930,UBERON:0000974,UBERON:0001004,UBERON:0001007,UBERON:0001062,UBERON:0001444,UBERON:0001555,UBERON:0002050,UBERON:0002532,UBERON:0003343,UBERON:0003729,UBERON:0004111,UBERON:0004119,UBERON:0004785,UBERON:0004923,UBERON:0005423,UBERON:0005434,UBERON:0007026
|accession_numbers=CAGE;DRX007973;DRR008845;DRZ000270;DRZ001655;DRZ011620;DRZ013005
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000063,CL:0000066,CL:0000076,CL:0000255,CL:0000548
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0003343,UBERON:0000033,UBERON:0000974,UBERON:0001007,UBERON:0000344,UBERON:0004121,UBERON:0000064,UBERON:0004119,UBERON:0000062,UBERON:0004111,UBERON:0000475,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0004923,UBERON:0000161,UBERON:0001444,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0004785,UBERON:0003729,UBERON:0010317,UBERON:0001555,UBERON:0001004,UBERON:0000153,UBERON:0007811,UBERON:0000165,UBERON:0000166
|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:1749,DOID:305,DOID:4,DOID:7
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0000255,CL:0002076,CL:0002251
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:7,DOID:305,DOID:1749
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100297,FF:0102024,FF:0101120,FF:0102211,FF:0102027,FF:0102709
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr1:209979467..209979494,-!p1@IRF6!1.94!96.74!IRF6;;chr1:201979743..201979762,+!p1@ELF3!1.94!85.41!ELF3;;chr3:189507432..189507459,+!p1@TP63!1.93!83.76!TP63;;chr3:181429704..181429722,+!p1@SOX2!1.91!80.10!SOX2;;chr1:201979703..201979721,+!p2@ELF3!1.75!55.80!ELF3;;chr8:10588010..10588030,-!p1@SOX7!1.73!52.26!SOX7;;chrX:30327504..30327509,-!p1@NR0B1!1.67!46.13!NR0B1;;chr10:48355030..48355090,+!p1@ZNF488!1.63!53.56!ZNF488;;chr5:2751762..2751784,-!p1@IRX2!1.58!37.04!IRX2;;chr2:176969228..176969260,+!p1@HOXD11!1.57!36.22!HOXD11;;chr14:38064429..38064486,-!p1@FOXA1!1.54!33.50!FOXA1;;chr11:34642612..34642646,+!p1@EHF!1.53!33.27!EHF;;chr8:102504651..102504683,+!p1@GRHL2!1.53!32.91!GRHL2;;chr6:1312325..1312340,+!p1@FOXQ1!1.50!48.96!FOXQ1;;chr6:126240380..126240430,+!p2@NCOA7!1.48!73.61!NCOA7;;chr20:55204351..55204377,+!p1@TFAP2C!1.47!36.22!TFAP2C;;chr13:73633131..73633149,+!p1@KLF5!1.42!259.77!KLF5;;chr10:64576105..64576133,-!p1@EGR2!1.42!51.43!EGR2;;chr2:176969179..176969226,+!p2@HOXD11!1.38!22.89!HOXD11;;chr1:209979411..209979433,-!p2@IRF6!1.35!21.23!IRF6;;chr8:102504979..102505010,+!p2@GRHL2!1.34!20.64!GRHL2;;chr7:96654133..96654150,-!p1@DLX5!1.33!20.41!DLX5;;chr22:19748231..19748317,+!p1@TBX1!1.33!20.17!TBX1;;chr6:126240442..126240459,+!p4@NCOA7!1.32!25.13!NCOA7;;chr3:181429741..181429767,+!p2@SOX2!1.30!18.99!SOX2;;chr14:37131058..37131139,+!p1@PAX9!1.28!17.93!PAX9;;chr20:50721803..50721857,-!p2@ZFP64!1.22!24.66!ZFP64;;chr5:172662197..172662216,-!p1@NKX2-5!1.22!15.45!NKX2-5;;chr7:96634850..96634874,+!p3@DLX6!1.17!13.92!DLX6;;chr6:28321971..28321995,-!p1@ZNF323!1.16!13.33!ZNF323;;chr7:73038839..73038862,-!p1@MLXIPL!1.12!12.03!MLXIPL;;chr7:97840743..97840786,+!p1@BHLHA15!1.11!11.91!BHLHA15;;chr1:158969752..158969780,+!p6@IFI16!1.10!20.41!IFI16;;chr5:134369905..134369972,-!p1@PITX1!1.10!17.93!PITX1;;chr12:66218598..66218645,+!p2@HMGA2!1.09!52.73!HMGA2;;chr6:28321909..28321965,-!p3@ZNF323!1.05!10.26!ZNF323;;chrY:21906594..21906622,-!p1@KDM5D!1.04!10.03!KDM5D;;chr8:128748308..128748324,+!p2@MYC!1.03!274.52!MYC;;chr12:66218255..66218304,+!p3@HMGA2!1.03!26.54!HMGA2;;chr7:96635178..96635181,+!p1@DLX6!1.03!9.79!DLX6;;chr6:122720765..122720831,+!p1@HSF2!1.02!128.82!HSF2;;chr13:28543285..28543314,-!p2@CDX2!1.01!9.20!CDX2;;chrY:2803415..2803468,+!p1@ZFY!1.01!9.20!ZFY;;chr9:114287433..114287513,+!p1@ZNF483!0.99!23.36!ZNF483;;chr14:61116183..61116208,-!p1@SIX1!0.98!33.39!SIX1;;chr6:126240463..126240489,+!p6@NCOA7!0.97!9.44!NCOA7;;chr2:60780607..60780624,-!p2@BCL11A!0.94!24.30!BCL11A;;chr1:247171316..247171336,-!p3@ZNF695!0.94!11.68!ZNF695;;chr2:176994408..176994492,+!p1@HOXD8!0.93!7.55!HOXD8;;chr19:1753498..1753519,+!p1@ONECUT3!0.92!7.31!ONECUT3;;chr17:17726907..17726958,-!p2@SREBF1!0.91!46.01!SREBF1;;chr12:54785074..54785122,-!p2@ZNF385A!0.90!10.97!ZNF385A;;chr12:66218003..66218018,+!p9@HMGA2!0.90!8.61!HMGA2;;chr13:79177703..79177729,-!p2@POU4F1!0.89!6.72!POU4F1;;chr2:176972000..176972025,+!p4@HOXD11!0.89!6.72!HOXD11;;chr2:122042770..122042785,-!p1@TFCP2L1!0.88!6.61!TFCP2L1;;chr17:8027418..8027432,-!p1@HES7!0.88!6.61!HES7;;chr7:27153454..27153469,-!p2@HOXA3!0.88!6.61!HOXA3;;chr9:100615499..100615519,+!p1@FOXE1!0.88!6.61!FOXE1;;chr17:70117153..70117174,+!p1@SOX9!0.87!69.60!SOX9;;chr12:66218183..66218209,+!p4@HMGA2!0.87!12.62!HMGA2;;chr1:247171347..247171366,-!p2@ZNF695!0.87!12.27!ZNF695;;chr12:66218378..66218401,+!p6@HMGA2!0.87!10.15!HMGA2;;chr6:10415276..10415341,-!p2@TFAP2A!0.87!7.90!TFAP2A;;chr7:155250249..155250278,+!p@chr7:155250249..155250278,+!0.87!6.37!EN2;;chr6:10415484..10415508,-!p3@TFAP2A!0.86!6.25!TFAP2A;;chr8:128747757..128747800,+!p7@MYC!0.85!8.49!MYC;;chr7:27196267..27196311,-!p1@HOXA7!0.85!6.13!HOXA7;;chr13:100623375..100623425,-!p1@ZIC5!0.85!6.02!ZIC5;;chr2:71127699..71127744,+!p1@VAX2!0.84!12.74!VAX2;;chr2:63277948..63277974,+!p1@OTX1!0.83!5.78!OTX1;;chr17:46703687..46703740,-!p1@HOXB9!0.83!5.78!HOXB9;;chr20:42295713..42295738,+!p2@MYBL2!0.82!35.98!MYBL2;;chr6:126240356..126240379,+!p7@NCOA7!0.82!6.96!NCOA7;;chr3:138665969..138665993,-!p2@FOXL2!0.82!5.66!FOXL2;;chr3:189507460..189507471,+!p3@TP63!0.82!5.54!TP63;;chrX:24169518..24169522,+!p8@ZFX!0.82!5.54!ZFX;;chr1:209979449..209979460,-!p3@IRF6!0.82!5.54!IRF6;;chr21:38071430..38071456,+!p1@SIM2!0.82!5.54!SIM2;;chr19:47523058..47523114,+!p1@NPAS1!0.81!5.43!NPAS1;;chr2:178128149..178128198,-!p2@NFE2L2!0.80!30.44!NFE2L2;;chr13:36871902..36872023,-!p1@CCDC169-SOHLH2,p1@CCDC169,p1@SOHLH2!0.80!12.15!SOHLH2;;chr6:1389789..1389821,+!p1@FOXF2!0.80!7.55!FOXF2;;chr1:50889103..50889145,-!p1@DMRTA2!0.80!5.31!DMRTA2;;chr1:6479968..6479986,-!p1@HES2!0.80!5.31!HES2;;chr9:129376201..129376225,+!p1@LMX1B!0.80!5.31!LMX1B;;chr8:102504690..102504704,+!p3@GRHL2!0.79!5.19!GRHL2;;chr3:138665937..138665968,-!p1@FOXL2!0.79!5.19!FOXL2;;chr2:60780753..60780800,-!p1@BCL11A!0.78!27.02!BCL11A;;chr5:2751785..2751808,-!p2@IRX2!0.78!5.07!IRX2;;chr11:47236584..47236679,+!p1@DDB2!0.77!59.10!DDB2;;chr11:8102749..8102769,+!p2@TUB!0.77!9.91!TUB;;chr12:66218573..6621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|ffid_belonging_in_development=CL:0000223,UBERON:0002532,UBERON:0006601,UBERON:0006595,UBERON:0010316
|fonse_cell_line=FF:0101120,FF:0102027
|fonse_cell_line=FF:0101120,FF:0102027
|fonse_cell_line_closure=FF:0101120,FF:0102027
|fonse_cell_line_closure=FF:0101120,FF:0102027
Line 35: Line 41:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/oral%2520squamous%2520cell%2520carcinoma%2520cell%2520line%253aHO-1-u-1.CNhs11287.10550-107I1.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/oral%2520squamous%2520cell%2520carcinoma%2520cell%2520line%253aHO-1-u-1.CNhs11287.10550-107I1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/oral%2520squamous%2520cell%2520carcinoma%2520cell%2520line%253aHO-1-u-1.CNhs11287.10550-107I1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/oral%2520squamous%2520cell%2520carcinoma%2520cell%2520line%253aHO-1-u-1.CNhs11287.10550-107I1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/oral%2520squamous%2520cell%2520carcinoma%2520cell%2520line%253aHO-1-u-1.CNhs11287.10550-107I1.hg38.nobarcode.ctss.bed.gz
|id=FF:10550-107I1
|id=FF:10550-107I1
|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0102211
|is_a=EFO:0002091;;FF:0000210;;FF:0102211
|is_obsolete=
|library_id=CNhs11287
|library_id_phase_based=2:CNhs11287
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10550
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10550
|name=oral squamous cell carcinoma cell line:HO-1-u-1
|name=oral squamous cell carcinoma cell line:HO-1-u-1
|namespace=FANTOM5
|namespace=FANTOM5
Line 42: Line 60:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11287,LSID759,release008,COMPLETED
|profile_hcage=CNhs11287,LSID759,release008,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
|repeat_enrich_byfamily=0,0,0.0242150211128343,0,0,0,0,-0.160318030086386,0.0919971935600616,-0.228932089967845,-0.236404963796911,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0.316893356260882,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,-0.11787160337842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0484300422256687,-0.0485623190169364,0,0,-0.0489135849874283,0,0,0,0,0,0,0,0,0.0484300422256687,0,0,0,0,0,0,0,0,0,0.0242150211128343,0,0.0817310878102494,0,0,0,0.0310443379004188,0,0,0,0.189399841791279,-0.0196815949360143,0,0,0.0242150211128343,0,-0.0496053090120377,-0.114262179688061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0.0484300422256687,0,0,-0.122091944173996,-0.355725931280975,0,0,0,0,0,0
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|rna_box=107
|rna_box=107
|rna_catalog_number=
|rna_catalog_number=
Line 57: Line 78:
|rna_weight_ug=50.9383
|rna_weight_ug=50.9383
|sample_age=
|sample_age=
|sample_category=cell lines
|sample_cell_catalog=RCB2102
|sample_cell_catalog=RCB2102
|sample_cell_line=HO-1-u-1
|sample_cell_line=HO-1-u-1
Line 69: Line 91:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.15943277981897e-271!GO:0043226;organelle;4.81985564238739e-219!GO:0043229;intracellular organelle;1.58335184629175e-218!GO:0043231;intracellular membrane-bound organelle;1.32422611095094e-213!GO:0043227;membrane-bound organelle;1.94221222109563e-213!GO:0005737;cytoplasm;3.52523602575216e-187!GO:0044422;organelle part;5.99019663207686e-165!GO:0044446;intracellular organelle part;2.27574197850226e-163!GO:0044444;cytoplasmic part;8.12863544720341e-126!GO:0032991;macromolecular complex;3.04079998451449e-112!GO:0044237;cellular metabolic process;1.80277251902825e-104!GO:0044238;primary metabolic process;4.11250130814694e-100!GO:0005634;nucleus;2.37922460791956e-97!GO:0030529;ribonucleoprotein complex;6.39604277285592e-95!GO:0043170;macromolecule metabolic process;2.6424857326186e-89!GO:0044428;nuclear part;5.69891000649461e-88!GO:0043233;organelle lumen;4.33027696701088e-85!GO:0031974;membrane-enclosed lumen;4.33027696701088e-85!GO:0003723;RNA binding;1.21456796202332e-82!GO:0005739;mitochondrion;1.02730820505477e-75!GO:0005515;protein binding;1.53841687411113e-64!GO:0006396;RNA processing;1.17985127975146e-57!GO:0005840;ribosome;1.68683657911182e-57!GO:0043234;protein complex;7.50807099766689e-57!GO:0006412;translation;3.39253846395663e-55!GO:0043283;biopolymer metabolic process;4.77661003624592e-55!GO:0031981;nuclear lumen;5.36009795207758e-52!GO:0016043;cellular component organization and biogenesis;2.30770956843979e-51!GO:0031090;organelle membrane;8.18661189989243e-51!GO:0044429;mitochondrial part;2.9673804770219e-50!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.11752631292379e-50!GO:0010467;gene expression;2.05279603445647e-49!GO:0003735;structural constituent of ribosome;7.33213880817691e-49!GO:0009058;biosynthetic process;1.37896883601668e-47!GO:0019538;protein metabolic process;5.5812466044381e-47!GO:0044249;cellular biosynthetic process;3.19117022137142e-46!GO:0031967;organelle envelope;5.71880439005222e-45!GO:0031975;envelope;6.83198051989458e-45!GO:0043228;non-membrane-bound organelle;2.13882868458032e-42!GO:0043232;intracellular non-membrane-bound organelle;2.13882868458032e-42!GO:0044267;cellular protein metabolic process;4.01569163500209e-42!GO:0033279;ribosomal subunit;4.80936410043519e-42!GO:0044260;cellular macromolecule metabolic process;5.03916149364532e-42!GO:0015031;protein transport;5.43940574754316e-42!GO:0005829;cytosol;1.30834687815848e-41!GO:0016071;mRNA metabolic process;2.61930562415103e-41!GO:0033036;macromolecule localization;6.1754208300685e-41!GO:0009059;macromolecule biosynthetic process;1.47803527750897e-40!GO:0006259;DNA metabolic process;3.8485262764081e-39!GO:0008380;RNA splicing;5.11710370244442e-38!GO:0006996;organelle organization and biogenesis;1.24969885027554e-37!GO:0008104;protein localization;4.5343536603145e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;5.08401007640242e-37!GO:0045184;establishment of protein localization;1.04925629353343e-36!GO:0006397;mRNA processing;1.15095312736846e-35!GO:0046907;intracellular transport;9.71449853771545e-35!GO:0065003;macromolecular complex assembly;1.53860053746832e-33!GO:0007049;cell cycle;6.21565272157016e-33!GO:0003676;nucleic acid binding;5.93235124108592e-32!GO:0005654;nucleoplasm;2.20454811588484e-31!GO:0005830;cytosolic ribosome (sensu Eukaryota);4.03404349442915e-30!GO:0022607;cellular component assembly;4.93258721415662e-30!GO:0000166;nucleotide binding;6.65689028063529e-30!GO:0006886;intracellular protein transport;4.60443305027264e-29!GO:0005740;mitochondrial envelope;7.07851976273838e-29!GO:0031966;mitochondrial membrane;1.82253146188108e-27!GO:0005681;spliceosome;3.75350600087926e-27!GO:0019866;organelle inner membrane;6.20336138824173e-26!GO:0031980;mitochondrial lumen;6.344881351733e-26!GO:0005759;mitochondrial matrix;6.344881351733e-26!GO:0044451;nucleoplasm part;4.04243029766005e-25!GO:0006974;response to DNA damage stimulus;5.65507082071229e-25!GO:0016462;pyrophosphatase activity;1.64518544881152e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;1.72866428253624e-24!GO:0044445;cytosolic part;1.74563265707552e-24!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.52570434206867e-24!GO:0005743;mitochondrial inner membrane;6.34709928399696e-24!GO:0022402;cell cycle process;1.05517792098603e-23!GO:0017111;nucleoside-triphosphatase activity;2.06702908844302e-23!GO:0016874;ligase activity;5.0669324289561e-23!GO:0016070;RNA metabolic process;7.50509784466452e-23!GO:0012505;endomembrane system;7.61328703897367e-23!GO:0051649;establishment of cellular localization;1.54564173095292e-22!GO:0005730;nucleolus;1.59606011334915e-22!GO:0051641;cellular localization;2.18023788804516e-22!GO:0015935;small ribosomal subunit;4.68551114830049e-22!GO:0044265;cellular macromolecule catabolic process;1.11047638291065e-21!GO:0000278;mitotic cell cycle;1.19843818520802e-21!GO:0006119;oxidative phosphorylation;1.35106919261488e-21!GO:0006457;protein folding;1.91542905384783e-21!GO:0015934;large ribosomal subunit;4.38408767839488e-21!GO:0005694;chromosome;4.80191103508375e-21!GO:0006281;DNA repair;4.9438390762705e-21!GO:0017076;purine nucleotide binding;1.05673963784305e-20!GO:0032553;ribonucleotide binding;1.34150039347602e-20!GO:0032555;purine ribonucleotide binding;1.34150039347602e-20!GO:0043285;biopolymer catabolic process;2.51785411039392e-20!GO:0006512;ubiquitin cycle;2.76267485131446e-20!GO:0044455;mitochondrial membrane part;2.76267485131446e-20!GO:0051603;proteolysis involved in cellular protein catabolic process;6.74733757059151e-20!GO:0009057;macromolecule catabolic process;7.65599544261686e-20!GO:0006511;ubiquitin-dependent protein catabolic process;8.73493661945174e-20!GO:0022618;protein-RNA complex assembly;1.38327989315641e-19!GO:0019941;modification-dependent protein catabolic process;1.4676769247006e-19!GO:0043632;modification-dependent macromolecule catabolic process;1.4676769247006e-19!GO:0044257;cellular protein catabolic process;2.40126258066701e-19!GO:0009719;response to endogenous stimulus;9.07785667200302e-19!GO:0042254;ribosome biogenesis and assembly;1.61421865430082e-18!GO:0051186;cofactor metabolic process;1.88070663655368e-18!GO:0044248;cellular catabolic process;3.08940799288814e-18!GO:0006260;DNA replication;7.18810565898695e-18!GO:0008135;translation factor activity, nucleic acid binding;7.39618530852032e-18!GO:0044427;chromosomal part;7.76237748889266e-18!GO:0005524;ATP binding;9.51838724216991e-18!GO:0032559;adenyl ribonucleotide binding;9.71237211729271e-18!GO:0030554;adenyl nucleotide binding;1.06176672145273e-17!GO:0030163;protein catabolic process;2.49631406905707e-17!GO:0022403;cell cycle phase;5.85385203640165e-17!GO:0000087;M phase of mitotic cell cycle;5.97872453940433e-17!GO:0051301;cell division;6.16624649212833e-17!GO:0005635;nuclear envelope;7.24166943540134e-17!GO:0005761;mitochondrial ribosome;9.71157377425165e-17!GO:0000313;organellar ribosome;9.71157377425165e-17!GO:0051276;chromosome organization and biogenesis;9.77963684057711e-17!GO:0007067;mitosis;1.07043594995858e-16!GO:0005746;mitochondrial respiratory chain;3.19329625853313e-16!GO:0006605;protein targeting;7.6152513027276e-16!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);8.0409910639019e-16!GO:0044453;nuclear membrane part;9.54505349001704e-16!GO:0031965;nuclear membrane;9.6843367007804e-16!GO:0016887;ATPase activity;1.04126716149485e-15!GO:0005783;endoplasmic reticulum;1.95342284939512e-15!GO:0048770;pigment granule;3.61369020938364e-15!GO:0042470;melanosome;3.61369020938364e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.70111260922483e-15!GO:0006366;transcription from RNA polymerase II promoter;4.06757080612837e-15!GO:0042623;ATPase activity, coupled;4.59227320217322e-15!GO:0000502;proteasome complex (sensu Eukaryota);4.97632345285562e-15!GO:0008134;transcription factor binding;4.97632345285562e-15!GO:0006732;coenzyme metabolic process;7.34467334427107e-15!GO:0004386;helicase activity;1.82160681004962e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.82160681004962e-14!GO:0003743;translation initiation factor activity;3.35314833205071e-14!GO:0043412;biopolymer modification;3.37845713672945e-14!GO:0000279;M phase;3.83110576286635e-14!GO:0005643;nuclear pore;4.04885751736153e-14!GO:0044432;endoplasmic reticulum part;4.42516439403369e-14!GO:0050136;NADH dehydrogenase (quinone) activity;7.38706020015277e-14!GO:0003954;NADH dehydrogenase activity;7.38706020015277e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.38706020015277e-14!GO:0051082;unfolded protein binding;8.75499738477597e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;1.10225828956158e-13!GO:0000375;RNA splicing, via transesterification reactions;1.10225828956158e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.10225828956158e-13!GO:0006399;tRNA metabolic process;2.46608594114427e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;3.91480523361517e-13!GO:0048193;Golgi vesicle transport;6.29833041266917e-13!GO:0006323;DNA packaging;1.31542015436749e-12!GO:0042775;organelle ATP synthesis coupled electron transport;1.58313060464785e-12!GO:0042773;ATP synthesis coupled electron transport;1.58313060464785e-12!GO:0051726;regulation of cell cycle;1.68783520670409e-12!GO:0000074;regulation of progression through cell cycle;1.85792288839022e-12!GO:0006364;rRNA processing;2.0913772279363e-12!GO:0016072;rRNA metabolic process;2.79329842577761e-12!GO:0006413;translational initiation;2.79329842577761e-12!GO:0008026;ATP-dependent helicase activity;3.55771307233306e-12!GO:0006464;protein modification process;4.77217026853893e-12!GO:0050657;nucleic acid transport;5.71209679362996e-12!GO:0051236;establishment of RNA localization;5.71209679362996e-12!GO:0050658;RNA transport;5.71209679362996e-12!GO:0006403;RNA localization;5.74242076517147e-12!GO:0030964;NADH dehydrogenase complex (quinone);6.33155509994933e-12!GO:0045271;respiratory chain complex I;6.33155509994933e-12!GO:0005747;mitochondrial respiratory chain complex I;6.33155509994933e-12!GO:0005794;Golgi apparatus;8.24430898832947e-12!GO:0009055;electron carrier activity;9.34364647251969e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.06276276387802e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.14491434192158e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.47807805805466e-11!GO:0065002;intracellular protein transport across a membrane;1.4973574223755e-11!GO:0006913;nucleocytoplasmic transport;1.71914034115958e-11!GO:0043687;post-translational protein modification;1.85382533574297e-11!GO:0046930;pore complex;4.31123646804264e-11!GO:0016604;nuclear body;4.51791374986382e-11!GO:0051169;nuclear transport;4.57286101622152e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;4.69461563815913e-11!GO:0012501;programmed cell death;5.97189351526471e-11!GO:0009056;catabolic process;6.03364177322845e-11!GO:0006915;apoptosis;8.7451937735495e-11!GO:0051188;cofactor biosynthetic process;8.77505004253023e-11!GO:0008565;protein transporter activity;9.27720882118054e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.01679441597473e-10!GO:0005789;endoplasmic reticulum membrane;1.21180807925692e-10!GO:0008639;small protein conjugating enzyme activity;1.63853586800366e-10!GO:0019787;small conjugating protein ligase activity;2.7035925811679e-10!GO:0004842;ubiquitin-protein ligase activity;2.78198642268475e-10!GO:0065004;protein-DNA complex assembly;4.03049162948842e-10!GO:0016192;vesicle-mediated transport;4.14375239065327e-10!GO:0015630;microtubule cytoskeleton;4.39798053242302e-10!GO:0006446;regulation of translational initiation;4.74221899742096e-10!GO:0003712;transcription cofactor activity;7.51056729253303e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.36028418388351e-10!GO:0004812;aminoacyl-tRNA ligase activity;8.36028418388351e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.36028418388351e-10!GO:0043038;amino acid activation;1.0344902241396e-09!GO:0006418;tRNA aminoacylation for protein translation;1.0344902241396e-09!GO:0043039;tRNA aminoacylation;1.0344902241396e-09!GO:0051028;mRNA transport;1.10779325038175e-09!GO:0016779;nucleotidyltransferase activity;1.36384187470019e-09!GO:0000785;chromatin;1.66060333382835e-09!GO:0008219;cell death;2.17900155969256e-09!GO:0016265;death;2.17900155969256e-09!GO:0016740;transferase activity;2.39551713785046e-09!GO:0009259;ribonucleotide metabolic process;2.4144402324372e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.87536408370702e-09!GO:0016881;acid-amino acid ligase activity;2.87536408370702e-09!GO:0009060;aerobic respiration;5.08250847385406e-09!GO:0006163;purine nucleotide metabolic process;5.10973714072342e-09!GO:0006333;chromatin assembly or disassembly;5.56025682577136e-09!GO:0006461;protein complex assembly;5.58719978977745e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.94713365660066e-09!GO:0009108;coenzyme biosynthetic process;6.21164675642775e-09!GO:0005819;spindle;6.36835059007171e-09!GO:0030532;small nuclear ribonucleoprotein complex;7.65438356791576e-09!GO:0043566;structure-specific DNA binding;7.90909225946033e-09!GO:0016607;nuclear speck;8.64528225407902e-09!GO:0017038;protein import;1.16222539192221e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.18194806499482e-08!GO:0006261;DNA-dependent DNA replication;1.52425796020485e-08!GO:0045333;cellular respiration;1.66872259265989e-08!GO:0007005;mitochondrion organization and biogenesis;1.95552240636579e-08!GO:0006164;purine nucleotide biosynthetic process;2.3127604990319e-08!GO:0009260;ribonucleotide biosynthetic process;2.34001232009323e-08!GO:0015986;ATP synthesis coupled proton transport;2.34001232009323e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.34001232009323e-08!GO:0016568;chromatin modification;2.58637985707767e-08!GO:0005667;transcription factor complex;2.77036140398519e-08!GO:0050794;regulation of cellular process;2.87498123918698e-08!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.05478008452977e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.14956129976264e-08!GO:0016491;oxidoreductase activity;4.77940100280526e-08!GO:0006099;tricarboxylic acid cycle;5.62595170512905e-08!GO:0046356;acetyl-CoA catabolic process;5.62595170512905e-08!GO:0032446;protein modification by small protein conjugation;5.65676493082954e-08!GO:0009150;purine ribonucleotide metabolic process;5.69958742015813e-08!GO:0015078;hydrogen ion transmembrane transporter activity;7.27845946638573e-08!GO:0009117;nucleotide metabolic process;8.489021512407e-08!GO:0005813;centrosome;8.7865278444189e-08!GO:0016567;protein ubiquitination;9.17346047339864e-08!GO:0048523;negative regulation of cellular process;1.03612859998915e-07!GO:0051329;interphase of mitotic cell cycle;1.41847692519288e-07!GO:0006084;acetyl-CoA metabolic process;1.72872433672196e-07!GO:0009109;coenzyme catabolic process;2.19725156675223e-07!GO:0048475;coated membrane;2.20502893637751e-07!GO:0030117;membrane coat;2.20502893637751e-07!GO:0005815;microtubule organizing center;2.36275246048129e-07!GO:0008094;DNA-dependent ATPase activity;2.57563261400924e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.65286441952918e-07!GO:0009141;nucleoside triphosphate metabolic process;2.67902343726806e-07!GO:0000775;chromosome, pericentric region;2.79920602418387e-07!GO:0046034;ATP metabolic process;2.8752034961708e-07!GO:0051187;cofactor catabolic process;2.8752034961708e-07!GO:0000245;spliceosome assembly;3.57619698927817e-07!GO:0006754;ATP biosynthetic process;3.7006022053563e-07!GO:0006753;nucleoside phosphate metabolic process;3.7006022053563e-07!GO:0005768;endosome;4.31336935166744e-07!GO:0009199;ribonucleoside triphosphate metabolic process;4.84428746305121e-07!GO:0006752;group transfer coenzyme metabolic process;5.27042871545873e-07!GO:0003697;single-stranded DNA binding;7.48207552887602e-07!GO:0044431;Golgi apparatus part;7.6317374037938e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;8.94672354517665e-07!GO:0009144;purine nucleoside triphosphate metabolic process;8.94672354517665e-07!GO:0009142;nucleoside triphosphate biosynthetic process;9.62648074187448e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;9.62648074187448e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.01421029625108e-06!GO:0016787;hydrolase activity;1.06577932757515e-06!GO:0000075;cell cycle checkpoint;1.07296988596659e-06!GO:0042981;regulation of apoptosis;1.07873153404609e-06!GO:0043067;regulation of programmed cell death;1.21154599619623e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.21154599619623e-06!GO:0045259;proton-transporting ATP synthase complex;1.23522154208881e-06!GO:0051325;interphase;1.25322708894744e-06!GO:0003899;DNA-directed RNA polymerase activity;1.37913138961775e-06!GO:0005793;ER-Golgi intermediate compartment;1.66557842829931e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.77535227017649e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.77535227017649e-06!GO:0005657;replication fork;1.83023849555776e-06!GO:0051246;regulation of protein metabolic process;2.60256677553515e-06!GO:0005762;mitochondrial large ribosomal subunit;2.64013387306134e-06!GO:0000315;organellar large ribosomal subunit;2.64013387306134e-06!GO:0019829;cation-transporting ATPase activity;2.82233197173383e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.12180908654398e-06!GO:0030120;vesicle coat;3.20867797861801e-06!GO:0030662;coated vesicle membrane;3.20867797861801e-06!GO:0007051;spindle organization and biogenesis;3.3361832795566e-06!GO:0048519;negative regulation of biological process;3.34312990298893e-06!GO:0043623;cellular protein complex assembly;3.62164650390844e-06!GO:0031324;negative regulation of cellular metabolic process;3.62164650390844e-06!GO:0000151;ubiquitin ligase complex;3.78874075679505e-06!GO:0016853;isomerase activity;4.58318892720924e-06!GO:0003724;RNA helicase activity;4.60641835082361e-06!GO:0051170;nuclear import;5.83347658400545e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.89548569936262e-06!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;7.10511058119174e-06!GO:0003924;GTPase activity;7.47451145092461e-06!GO:0006334;nucleosome assembly;7.62999843910112e-06!GO:0016859;cis-trans isomerase activity;8.09015863908077e-06!GO:0016563;transcription activator activity;8.12429479225529e-06!GO:0031497;chromatin assembly;8.51457038947502e-06!GO:0006916;anti-apoptosis;8.64643445977638e-06!GO:0008654;phospholipid biosynthetic process;9.29725989291638e-06!GO:0051168;nuclear export;1.07034373503506e-05!GO:0006613;cotranslational protein targeting to membrane;1.08977362865955e-05!GO:0006793;phosphorus metabolic process;1.09380338907556e-05!GO:0006796;phosphate metabolic process;1.09380338907556e-05!GO:0006606;protein import into nucleus;1.21316772950754e-05!GO:0043069;negative regulation of programmed cell death;1.25328344823376e-05!GO:0006302;double-strand break repair;1.36529498682002e-05!GO:0050662;coenzyme binding;1.45322280240298e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.58712783111667e-05!GO:0000139;Golgi membrane;1.68284438089789e-05!GO:0016564;transcription repressor activity;1.80789843035141e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.9140091860148e-05!GO:0051427;hormone receptor binding;2.14109140915952e-05!GO:0000314;organellar small ribosomal subunit;2.14864615702601e-05!GO:0005763;mitochondrial small ribosomal subunit;2.14864615702601e-05!GO:0043066;negative regulation of apoptosis;2.33409394406054e-05!GO:0005839;proteasome core complex (sensu Eukaryota);2.39998759061348e-05!GO:0003713;transcription coactivator activity;2.52540812657648e-05!GO:0046483;heterocycle metabolic process;2.68970083560964e-05!GO:0009892;negative regulation of metabolic process;2.94672293219867e-05!GO:0043021;ribonucleoprotein binding;3.08239138314335e-05!GO:0045786;negative regulation of progression through cell cycle;3.10468167325055e-05!GO:0005798;Golgi-associated vesicle;3.69068222119854e-05!GO:0003678;DNA helicase activity;3.69733039958803e-05!GO:0006091;generation of precursor metabolites and energy;4.12277805523754e-05!GO:0008033;tRNA processing;4.55790654794375e-05!GO:0035257;nuclear hormone receptor binding;4.59548940029278e-05!GO:0003682;chromatin binding;4.59548940029278e-05!GO:0003690;double-stranded DNA binding;4.62476069938472e-05!GO:0044440;endosomal part;5.00221894245095e-05!GO:0010008;endosome membrane;5.00221894245095e-05!GO:0048037;cofactor binding;5.55694830314253e-05!GO:0005525;GTP binding;5.58076002958833e-05!GO:0006352;transcription initiation;5.65204677714683e-05!GO:0044452;nucleolar part;6.32708565491577e-05!GO:0000079;regulation of cyclin-dependent protein kinase activity;6.48183424571878e-05!GO:0007017;microtubule-based process;6.62076224135518e-05!GO:0050789;regulation of biological process;7.06560801346089e-05!GO:0019222;regulation of metabolic process;7.36315024217533e-05!GO:0004298;threonine endopeptidase activity;7.40593602688365e-05!GO:0003684;damaged DNA binding;9.0762089358683e-05!GO:0016023;cytoplasmic membrane-bound vesicle;9.91444107000443e-05!GO:0031988;membrane-bound vesicle;0.000100081514838507!GO:0019843;rRNA binding;0.000108412654565398!GO:0051052;regulation of DNA metabolic process;0.000108583944351511!GO:0019752;carboxylic acid metabolic process;0.000112541945431206!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.000112729069990747!GO:0006082;organic acid metabolic process;0.000112779161019923!GO:0045454;cell redox homeostasis;0.000122779101733696!GO:0008186;RNA-dependent ATPase activity;0.000123445811924312!GO:0016481;negative regulation of transcription;0.000128246791701285!GO:0016310;phosphorylation;0.000131603420285029!GO:0000776;kinetochore;0.000135687152454894!GO:0032508;DNA duplex unwinding;0.000137364439019329!GO:0032392;DNA geometric change;0.000137364439019329!GO:0016741;transferase activity, transferring one-carbon groups;0.000147198715874124!GO:0008168;methyltransferase activity;0.000149774014795673!GO:0005788;endoplasmic reticulum lumen;0.000178014562351845!GO:0005770;late endosome;0.000178014562351845!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000184989810296484!GO:0005048;signal sequence binding;0.000206145801324777!GO:0019867;outer membrane;0.000214057982942131!GO:0048471;perinuclear region of cytoplasm;0.000221121934032471!GO:0031982;vesicle;0.000226210118259934!GO:0003729;mRNA binding;0.000229553742735073!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000233853274317737!GO:0031968;organelle outer membrane;0.000234446415558235!GO:0005769;early endosome;0.000248420245610376!GO:0031072;heat shock protein binding;0.000264541971569183!GO:0031410;cytoplasmic vesicle;0.000271544383165983!GO:0006612;protein targeting to membrane;0.00027294203897277!GO:0046467;membrane lipid biosynthetic process;0.000286138874413779!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000286138874413779!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000301684690004053!GO:0030118;clathrin coat;0.000302850352907155!GO:0042802;identical protein binding;0.000314309173986636!GO:0030867;rough endoplasmic reticulum membrane;0.000327001262947787!GO:0015980;energy derivation by oxidation of organic compounds;0.000331735762503267!GO:0006520;amino acid metabolic process;0.000332148033381896!GO:0015631;tubulin binding;0.000335809870370828!GO:0004004;ATP-dependent RNA helicase activity;0.000341020759830408!GO:0006626;protein targeting to mitochondrion;0.000348398684570856!GO:0007010;cytoskeleton organization and biogenesis;0.000384662581790944!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.000394886210669391!GO:0009165;nucleotide biosynthetic process;0.000400706074825389!GO:0006401;RNA catabolic process;0.00040846783731644!GO:0032561;guanyl ribonucleotide binding;0.000412150132200321!GO:0019001;guanyl nucleotide binding;0.000412150132200321!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.000424783213519428!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000429645867877351!GO:0006383;transcription from RNA polymerase III promoter;0.000451199092370769!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000451199092370769!GO:0016251;general RNA polymerase II transcription factor activity;0.000471112201820364!GO:0030880;RNA polymerase complex;0.000510095171925202!GO:0006268;DNA unwinding during replication;0.000520541437162817!GO:0006402;mRNA catabolic process;0.000546977635555167!GO:0003714;transcription corepressor activity;0.00054876923889279!GO:0005741;mitochondrial outer membrane;0.000555438052789093!GO:0000049;tRNA binding;0.000576970617854287!GO:0005874;microtubule;0.000578002675103291!GO:0051920;peroxiredoxin activity;0.000589373528727127!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000602507188538995!GO:0007088;regulation of mitosis;0.000603365761970955!GO:0043624;cellular protein complex disassembly;0.000610777303705001!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000621317653857712!GO:0045893;positive regulation of transcription, DNA-dependent;0.000669636107697275!GO:0004576;oligosaccharyl transferase activity;0.000672879925896965!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.000672879925896965!GO:0048522;positive regulation of cellular process;0.000673928869279163!GO:0043681;protein import into mitochondrion;0.000679017191370693!GO:0005791;rough endoplasmic reticulum;0.000684860248499657!GO:0016363;nuclear matrix;0.000690480460262193!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00071720485918226!GO:0000082;G1/S transition of mitotic cell cycle;0.000748336298890848!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00078779374290342!GO:0006405;RNA export from nucleus;0.000791543823650947!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000797649568274984!GO:0006414;translational elongation;0.000870757724427189!GO:0006310;DNA recombination;0.000871184814141786!GO:0007052;mitotic spindle organization and biogenesis;0.000871389364764619!GO:0006839;mitochondrial transport;0.000898142526315337!GO:0004527;exonuclease activity;0.000931686256573781!GO:0045941;positive regulation of transcription;0.000956607892572319!GO:0008250;oligosaccharyl transferase complex;0.000962384863242875!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00101510515584392!GO:0000428;DNA-directed RNA polymerase complex;0.00101510515584392!GO:0051087;chaperone binding;0.00102620780289997!GO:0007059;chromosome segregation;0.00103868227195652!GO:0030131;clathrin adaptor complex;0.00110774973503534!GO:0005684;U2-dependent spliceosome;0.00113714739626116!GO:0048500;signal recognition particle;0.00121280003771074!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00122201857697659!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00122201857697659!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00122201857697659!GO:0008652;amino acid biosynthetic process;0.00127181211360477!GO:0032984;macromolecular complex disassembly;0.00128562516151683!GO:0008610;lipid biosynthetic process;0.00135040860199702!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00135320530253668!GO:0030119;AP-type membrane coat adaptor complex;0.00140689041761232!GO:0003702;RNA polymerase II transcription factor activity;0.00141291583831151!GO:0051252;regulation of RNA metabolic process;0.00150963988135007!GO:0008312;7S RNA binding;0.00151095768892001!GO:0005876;spindle microtubule;0.00152603312778164!GO:0033116;ER-Golgi intermediate compartment membrane;0.00154966602829428!GO:0006767;water-soluble vitamin metabolic process;0.00165724723618206!GO:0006740;NADPH regeneration;0.00167965987849161!GO:0006098;pentose-phosphate shunt;0.00167965987849161!GO:0006891;intra-Golgi vesicle-mediated transport;0.00167965987849161!GO:0000096;sulfur amino acid metabolic process;0.00167965987849161!GO:0000059;protein import into nucleus, docking;0.00168731789212252!GO:0046474;glycerophospholipid biosynthetic process;0.0017808686616263!GO:0006519;amino acid and derivative metabolic process;0.00190735535299847!GO:0008139;nuclear localization sequence binding;0.00194167840728841!GO:0051287;NAD binding;0.00202550661741773!GO:0046489;phosphoinositide biosynthetic process;0.00208289761731311!GO:0009112;nucleobase metabolic process;0.00209512234274042!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00222094389656299!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00222094389656299!GO:0018196;peptidyl-asparagine modification;0.00226667468461199!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00226667468461199!GO:0006144;purine base metabolic process;0.00227026145202023!GO:0006275;regulation of DNA replication;0.00227575163602!GO:0007093;mitotic cell cycle checkpoint;0.00228626063311431!GO:0005885;Arp2/3 protein complex;0.00232342575336223!GO:0031252;leading edge;0.00233928695784675!GO:0043241;protein complex disassembly;0.00236473063938702!GO:0031323;regulation of cellular metabolic process;0.00237988176919316!GO:0006733;oxidoreduction coenzyme metabolic process;0.00246343074748584!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00247681440595464!GO:0015399;primary active transmembrane transporter activity;0.00247681440595464!GO:0030133;transport vesicle;0.00250750180310351!GO:0006611;protein export from nucleus;0.00272299414772626!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00278424848937052!GO:0006007;glucose catabolic process;0.00279035187506892!GO:0045892;negative regulation of transcription, DNA-dependent;0.00295164366592231!GO:0006350;transcription;0.00299152172118248!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00311857040312449!GO:0009303;rRNA transcription;0.00339617737226915!GO:0004518;nuclease activity;0.0034028546190395!GO:0007264;small GTPase mediated signal transduction;0.00344340023368947!GO:0043488;regulation of mRNA stability;0.00357010426174605!GO:0043487;regulation of RNA stability;0.00357010426174605!GO:0006338;chromatin remodeling;0.00380566741871245!GO:0000922;spindle pole;0.00381584606354691!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00386219003729805!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00390073544531952!GO:0045047;protein targeting to ER;0.00390073544531952!GO:0022411;cellular component disassembly;0.0040604565484426!GO:0030176;integral to endoplasmic reticulum membrane;0.00423579528367659!GO:0051053;negative regulation of DNA metabolic process;0.00424038986596541!GO:0006284;base-excision repair;0.00424097742053137!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00442649155344339!GO:0031124;mRNA 3'-end processing;0.00445423098374707!GO:0048487;beta-tubulin binding;0.00445775146830451!GO:0019899;enzyme binding;0.00452537865282145!GO:0035258;steroid hormone receptor binding;0.00460058805244776!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.00466573197567993!GO:0030134;ER to Golgi transport vesicle;0.00466725404803273!GO:0004003;ATP-dependent DNA helicase activity;0.0050177621123395!GO:0065009;regulation of a molecular function;0.00513438542777041!GO:0051540;metal cluster binding;0.00515506804567611!GO:0051536;iron-sulfur cluster binding;0.00515506804567611!GO:0005637;nuclear inner membrane;0.00515744993834403!GO:0045045;secretory pathway;0.00534819168186302!GO:0030658;transport vesicle membrane;0.00545140546686188!GO:0006289;nucleotide-excision repair;0.00546920083555883!GO:0003711;transcription elongation regulator activity;0.00549708069129988!GO:0019783;small conjugating protein-specific protease activity;0.00553445836996817!GO:0004674;protein serine/threonine kinase activity;0.00573552248740135!GO:0007006;mitochondrial membrane organization and biogenesis;0.00573552248740135!GO:0006730;one-carbon compound metabolic process;0.00574741459603823!GO:0000786;nucleosome;0.00580258075241515!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00582432901754065!GO:0015002;heme-copper terminal oxidase activity;0.00582432901754065!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00582432901754065!GO:0004129;cytochrome-c oxidase activity;0.00582432901754065!GO:0006818;hydrogen transport;0.00582605481315683!GO:0015992;proton transport;0.00651856828644284!GO:0043414;biopolymer methylation;0.00675453239178059!GO:0032259;methylation;0.00688899641797577!GO:0006739;NADP metabolic process;0.00693254293328705!GO:0022890;inorganic cation transmembrane transporter activity;0.00698565494172168!GO:0030521;androgen receptor signaling pathway;0.00702224248003191!GO:0031570;DNA integrity checkpoint;0.00714163258705577!GO:0000086;G2/M transition of mitotic cell cycle;0.00721491421000087!GO:0046983;protein dimerization activity;0.00726066237719736!GO:0005832;chaperonin-containing T-complex;0.00729154106536983!GO:0042770;DNA damage response, signal transduction;0.00737448514235382!GO:0000725;recombinational repair;0.00756008763850364!GO:0000724;double-strand break repair via homologous recombination;0.00756008763850364!GO:0006541;glutamine metabolic process;0.00761036710775355!GO:0006769;nicotinamide metabolic process;0.00768493053073605!GO:0003746;translation elongation factor activity;0.00785623120146419!GO:0004843;ubiquitin-specific protease activity;0.0080557714827923!GO:0006643;membrane lipid metabolic process;0.00819241794223416!GO:0008180;signalosome;0.00863193679417003!GO:0000178;exosome (RNase complex);0.00881292036508878!GO:0032200;telomere organization and biogenesis;0.00891082152400322!GO:0000723;telomere maintenance;0.00891082152400322!GO:0005669;transcription factor TFIID complex;0.00896344111656787!GO:0030132;clathrin coat of coated pit;0.00896757727080713!GO:0009081;branched chain family amino acid metabolic process;0.00898125743661215!GO:0051789;response to protein stimulus;0.00922187254753846!GO:0006986;response to unfolded protein;0.00922187254753846!GO:0009451;RNA modification;0.00924473937416057!GO:0043596;nuclear replication fork;0.00924473937416057!GO:0000792;heterochromatin;0.00940545289791679!GO:0043022;ribosome binding;0.00941406434500415!GO:0007050;cell cycle arrest;0.00994862050014251!GO:0016620;oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;0.0101172383681285!GO:0051539;4 iron, 4 sulfur cluster binding;0.0101172383681285!GO:0030660;Golgi-associated vesicle membrane;0.0101240553332435!GO:0006650;glycerophospholipid metabolic process;0.0102254291528708!GO:0004029;aldehyde dehydrogenase (NAD) activity;0.0102310182375966!GO:0042026;protein refolding;0.0104694161081213!GO:0016272;prefoldin complex;0.0105052826306259!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0106297082155082!GO:0016044;membrane organization and biogenesis;0.0109122046634397!GO:0004221;ubiquitin thiolesterase activity;0.0109572449686197!GO:0006270;DNA replication initiation;0.0111104452653973!GO:0016790;thiolester hydrolase activity;0.0111108751719638!GO:0006607;NLS-bearing substrate import into nucleus;0.0112480154500075!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0113038351612305!GO:0043189;H4/H2A histone acetyltransferase complex;0.01159385159218!GO:0000287;magnesium ion binding;0.0116174815713746!GO:0008022;protein C-terminus binding;0.0116505300311288!GO:0008017;microtubule binding;0.0116597845320108!GO:0016791;phosphoric monoester hydrolase activity;0.011773359467918!GO:0004532;exoribonuclease activity;0.011773359467918!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.011773359467918!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0117779932540671!GO:0031123;RNA 3'-end processing;0.0118352586431707!GO:0016197;endosome transport;0.011937705572271!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0126618524567788!GO:0030127;COPII vesicle coat;0.0127439476294355!GO:0012507;ER to Golgi transport vesicle membrane;0.0127439476294355!GO:0016281;eukaryotic translation initiation factor 4F complex;0.012750115768129!GO:0008287;protein serine/threonine phosphatase complex;0.0128027080323866!GO:0000339;RNA cap binding;0.0128693811192269!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0128783665533211!GO:0010468;regulation of gene expression;0.0129426092392642!GO:0043284;biopolymer biosynthetic process;0.0129705582159719!GO:0046519;sphingoid metabolic process;0.013083162158856!GO:0006378;mRNA polyadenylation;0.0131274394103776!GO:0006672;ceramide metabolic process;0.0131382224825291!GO:0006506;GPI anchor biosynthetic process;0.013257327150746!GO:0043492;ATPase activity, coupled to movement of substances;0.0132732749608374!GO:0006505;GPI anchor metabolic process;0.0135745617350753!GO:0035267;NuA4 histone acetyltransferase complex;0.0137850781361307!GO:0030137;COPI-coated vesicle;0.0137913833209343!GO:0030663;COPI coated vesicle membrane;0.0139231214416499!GO:0030126;COPI vesicle coat;0.0139231214416499!GO:0042393;histone binding;0.014060117383055!GO:0006118;electron transport;0.0140740491652542!GO:0051101;regulation of DNA binding;0.0140921479472768!GO:0048468;cell development;0.014613740737836!GO:0030036;actin cytoskeleton organization and biogenesis;0.0146710446261729!GO:0005663;DNA replication factor C complex;0.0149635809866997!GO:0005773;vacuole;0.014991819161149!GO:0009116;nucleoside metabolic process;0.0150694266026122!GO:0006376;mRNA splice site selection;0.0150694266026122!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0150694266026122!GO:0006595;polyamine metabolic process;0.0151584834006844!GO:0019362;pyridine nucleotide metabolic process;0.0160364000016844!GO:0005905;coated pit;0.0163603187462573!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0164304819875185!GO:0007243;protein kinase cascade;0.0166050318671538!GO:0031625;ubiquitin protein ligase binding;0.0166358977537145!GO:0040029;regulation of gene expression, epigenetic;0.0166418291358241!GO:0046365;monosaccharide catabolic process;0.0169864061919927!GO:0046982;protein heterodimerization activity;0.0169864061919927!GO:0000228;nuclear chromosome;0.0171047542302445!GO:0030384;phosphoinositide metabolic process;0.0171625077000893!GO:0016407;acetyltransferase activity;0.017183518669521!GO:0001824;blastocyst development;0.0172392616379879!GO:0043065;positive regulation of apoptosis;0.0172884360595837!GO:0008632;apoptotic program;0.0177024782966127!GO:0008234;cysteine-type peptidase activity;0.017733608835484!GO:0008629;induction of apoptosis by intracellular signals;0.0179645332255667!GO:0006497;protein amino acid lipidation;0.0181486157345753!GO:0008156;negative regulation of DNA replication;0.0182713770171359!GO:0008601;protein phosphatase type 2A regulator activity;0.0188708555980099!GO:0030145;manganese ion binding;0.0189845661516201!GO:0006778;porphyrin metabolic process;0.0190521846097674!GO:0033013;tetrapyrrole metabolic process;0.0190521846097674!GO:0006417;regulation of translation;0.0190852822386494!GO:0051098;regulation of binding;0.0201284988597039!GO:0016584;nucleosome positioning;0.0201756717037014!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0201924366080555!GO:0001701;in utero embryonic development;0.0206568948744592!GO:0001832;blastocyst growth;0.0214756144991276!GO:0043068;positive regulation of programmed cell death;0.021679791913834!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0217350737212551!GO:0000097;sulfur amino acid biosynthetic process;0.0222307643077101!GO:0046966;thyroid hormone receptor binding;0.0230432748595058!GO:0000209;protein polyubiquitination;0.0235905157931338!GO:0004300;enoyl-CoA hydratase activity;0.023668859666873!GO:0047115;trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity;0.0238856876085838!GO:0000152;nuclear ubiquitin ligase complex;0.0241012865631679!GO:0007021;tubulin folding;0.024392048678893!GO:0006892;post-Golgi vesicle-mediated transport;0.0247309922943342!GO:0005844;polysome;0.0247709256857737!GO:0043601;nuclear replisome;0.0248668089902255!GO:0030894;replisome;0.0248668089902255!GO:0051656;establishment of organelle localization;0.0252029568612976!GO:0006400;tRNA modification;0.0255756574807417!GO:0008637;apoptotic mitochondrial changes;0.0256145028209923!GO:0046164;alcohol catabolic process;0.0258500852833103!GO:0019320;hexose catabolic process;0.0260598465797366!GO:0044450;microtubule organizing center part;0.0263864295695532!GO:0030125;clathrin vesicle coat;0.0267424000442754!GO:0030665;clathrin coated vesicle membrane;0.0267424000442754!GO:0043433;negative regulation of transcription factor activity;0.026932837924758!GO:0006779;porphyrin biosynthetic process;0.027162014304517!GO:0033014;tetrapyrrole biosynthetic process;0.027162014304517!GO:0019318;hexose metabolic process;0.0275045271953145!GO:0017166;vinculin binding;0.0275262996643704!GO:0006081;aldehyde metabolic process;0.0275662896386119!GO:0031529;ruffle organization and biogenesis;0.0278118951914295!GO:0031970;organelle envelope lumen;0.0278332818916816!GO:0065007;biological regulation;0.0279784045395838!GO:0009124;nucleoside monophosphate biosynthetic process;0.0283369365078065!GO:0009123;nucleoside monophosphate metabolic process;0.0283369365078065!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0288679708419958!GO:0008097;5S rRNA binding;0.0291905432352649!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0292691498079737!GO:0008276;protein methyltransferase activity;0.029359660277183!GO:0046112;nucleobase biosynthetic process;0.0295791268373714!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0296258886426795!GO:0005996;monosaccharide metabolic process;0.0300762401942389!GO:0019887;protein kinase regulator activity;0.0302352428334045!GO:0000077;DNA damage checkpoint;0.0302601360467733!GO:0008408;3'-5' exonuclease activity;0.0307912932394959!GO:0030433;ER-associated protein catabolic process;0.0309125074211002!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0309125074211002!GO:0008361;regulation of cell size;0.0314567383285492!GO:0044262;cellular carbohydrate metabolic process;0.0315011523224406!GO:0009113;purine base biosynthetic process;0.0316356324252452!GO:0009161;ribonucleoside monophosphate metabolic process;0.0320558223735371!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.0320558223735371!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0320689545753751!GO:0001889;liver development;0.0325507160631933!GO:0051338;regulation of transferase activity;0.0327974601861784!GO:0031577;spindle checkpoint;0.0327974601861784!GO:0006950;response to stress;0.0333935341343825!GO:0032774;RNA biosynthetic process;0.0335977489823984!GO:0042168;heme metabolic process;0.0340530595098061!GO:0005092;GDP-dissociation inhibitor activity;0.0347066999556269!GO:0005784;translocon complex;0.0347066999556269!GO:0004722;protein serine/threonine phosphatase activity;0.0351762980823547!GO:0000123;histone acetyltransferase complex;0.0351879770087664!GO:0009067;aspartate family amino acid biosynthetic process;0.035753800058847!GO:0030659;cytoplasmic vesicle membrane;0.035769610013951!GO:0006564;L-serine biosynthetic process;0.0359825726929237!GO:0005732;small nucleolar ribonucleoprotein complex;0.0362427017254126!GO:0005758;mitochondrial intermembrane space;0.0362738546387257!GO:0000781;chromosome, telomeric region;0.0368149184219316!GO:0004448;isocitrate dehydrogenase activity;0.0370140034309121!GO:0008536;Ran GTPase binding;0.0373339077298641!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.037552269519098!GO:0046128;purine ribonucleoside metabolic process;0.0376407036831817!GO:0042278;purine nucleoside metabolic process;0.0376407036831817!GO:0006351;transcription, DNA-dependent;0.0382718305863234!GO:0008538;proteasome activator activity;0.0383034001880576!GO:0003756;protein disulfide isomerase activity;0.0384211575655276!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0384211575655276!GO:0031406;carboxylic acid binding;0.0388473864794735!GO:0030503;regulation of cell redox homeostasis;0.0388473864794735!GO:0008426;protein kinase C inhibitor activity;0.0390750792628734!GO:0031371;ubiquitin conjugating enzyme complex;0.0394642553373526!GO:0004239;methionyl aminopeptidase activity;0.0402185380324741!GO:0030496;midbody;0.0404760710982376!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0406975631054038!GO:0001558;regulation of cell growth;0.0411257662860173!GO:0050178;phenylpyruvate tautomerase activity;0.0417586937948929!GO:0017134;fibroblast growth factor binding;0.0417889865575892!GO:0003887;DNA-directed DNA polymerase activity;0.0418613961255605!GO:0005680;anaphase-promoting complex;0.0424248154488282!GO:0004523;ribonuclease H activity;0.0424248154488282!GO:0000819;sister chromatid segregation;0.0431159030007079!GO:0033673;negative regulation of kinase activity;0.0431770625954169!GO:0006469;negative regulation of protein kinase activity;0.0431770625954169!GO:0000910;cytokinesis;0.0431770625954169!GO:0031326;regulation of cellular biosynthetic process;0.0434690101704413!GO:0019206;nucleoside kinase activity;0.0436487903296035!GO:0022406;membrane docking;0.0443580662548406!GO:0048278;vesicle docking;0.0443580662548406!GO:0006415;translational termination;0.0447921461823152!GO:0030140;trans-Golgi network transport vesicle;0.0448630498139555!GO:0000726;non-recombinational repair;0.0448893684676509!GO:0031503;protein complex localization;0.0450642559203405!GO:0001726;ruffle;0.0456119407412452!GO:0047485;protein N-terminus binding;0.0457030006298572!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0458123272334665!GO:0048518;positive regulation of biological process;0.0458123272334665!GO:0006984;ER-nuclear signaling pathway;0.045866795892277!GO:0030518;steroid hormone receptor signaling pathway;0.0460343184148718!GO:0016311;dephosphorylation;0.0463396391243611!GO:0050681;androgen receptor binding;0.0468367271511507!GO:0033170;DNA-protein loading ATPase activity;0.0468367271511507!GO:0003689;DNA clamp loader activity;0.0468367271511507!GO:0006783;heme biosynthetic process;0.046839225508037!GO:0043631;RNA polyadenylation;0.0473121308573576!GO:0042158;lipoprotein biosynthetic process;0.0473931957687059!GO:0000323;lytic vacuole;0.0473931957687059!GO:0005764;lysosome;0.0473931957687059!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0474143974153643!GO:0003923;GPI-anchor transamidase activity;0.0474529215234086!GO:0016255;attachment of GPI anchor to protein;0.0474529215234086!GO:0042765;GPI-anchor transamidase complex;0.0474529215234086!GO:0016049;cell growth;0.0478332067071709!GO:0006406;mRNA export from nucleus;0.0480994776045556!GO:0007004;telomere maintenance via telomerase;0.0482504309527119!GO:0000159;protein phosphatase type 2A complex;0.0485119995638474!GO:0032507;maintenance of cellular protein localization;0.0499690546895963
|sample_id=10550
|sample_id=10550
|sample_note=
|sample_note=
Line 76: Line 99:
|sample_tissue=gum
|sample_tissue=gum
|top_motifs=VSX1,2:1.97229230821;ZEB1:1.70159751039;bHLH_family:1.59834580886;SNAI1..3:1.52834629764;ADNP_IRX_SIX_ZHX:1.27741057731;SP1:1.16379471212;NFY{A,B,C}:1.15100049767;E2F1..5:1.13761060669;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.11615612703;HSF1,2:0.990953606257;ATF4:0.970596174297;FOXQ1:0.961019148123;TFDP1:0.882305917064;CDX1,2,4:0.841467738632;PAX8:0.838739054656;RBPJ:0.819374133566;NANOG:0.756203913225;ELK1,4_GABP{A,B1}:0.735219013649;BREu{core}:0.729591423287;TP53:0.726291562429;NRF1:0.703427877638;POU2F1..3:0.701284778336;PITX1..3:0.698733293542;SOX2:0.69580937833;TBX4,5:0.694172690708;NR6A1:0.691176208718;CDC5L:0.581964216182;NKX2-3_NKX2-5:0.577457251715;LHX3,4:0.569896101612;SOX17:0.569372606181;ZNF143:0.565691251137;PBX1:0.550945281083;NR5A1,2:0.547173923182;PAX1,9:0.544437055032;STAT5{A,B}:0.508901735796;POU1F1:0.498852979435;TEF:0.478622398671;FOXP1:0.469753938159;ZFP161:0.467553831508;LMO2:0.465091088071;NKX3-2:0.445785783462;ZBTB16:0.443687969169;MYOD1:0.421931592006;AHR_ARNT_ARNT2:0.42181116711;ZNF384:0.420735316752;NKX2-2,8:0.419622507436;FOXA2:0.413032356195;FOXM1:0.409153988635;TBP:0.401487541147;FOX{I1,J2}:0.401362514493;HOX{A6,A7,B6,B7}:0.398455371121;FOX{F1,F2,J1}:0.389469789152;ONECUT1,2:0.380310926256;NFE2:0.372009789529;HOX{A4,D4}:0.331231084993;MYB:0.318361065251;CEBPA,B_DDIT3:0.30712635314;PAX4:0.298540255675;ESRRA:0.282383213145;ATF5_CREB3:0.280394194675;OCT4_SOX2{dimer}:0.266291685525;PRRX1,2:0.218250320087;POU5F1:0.217249256559;ZNF148:0.207379531175;NKX6-1,2:0.182722733636;HOX{A5,B5}:0.182644741793;FOXL1:0.172122513079;FOS_FOS{B,L1}_JUN{B,D}:0.14651094621;FOSL2:0.128329470398;FOXN1:0.103227305555;HNF1A:0.092986889651;XCPE1{core}:0.0729953679186;HIC1:0.0699631144989;CRX:0.0637579341751;HIF1A:0.0613455469397;RFX2..5_RFXANK_RFXAP:0.0240805387603;CREB1:0.0205070805529;LEF1_TCF7_TCF7L1,2:0.0159218789195;T:-0.00528874182479;CUX2:-0.023678757533;GATA6:-0.0257408433314;HAND1,2:-0.0274176945559;YY1:-0.0432579030912;GFI1B:-0.0436477473858;AIRE:-0.0478355180102;NFIX:-0.0531121545598;ATF2:-0.0785873386181;HES1:-0.0793254923594;NFKB1_REL_RELA:-0.0996713059684;NKX2-1,4:-0.113385617676;POU6F1:-0.115120490178;TEAD1:-0.1171294882;TOPORS:-0.121693574917;EN1,2:-0.124202985322;TFAP2B:-0.124731508529;SOX{8,9,10}:-0.13176541625;NFE2L2:-0.137092862983;MEF2{A,B,C,D}:-0.14087591809;ALX1:-0.141687615838;SOX5:-0.148724844636;HLF:-0.150080448756;GFI1:-0.162509112787;FOX{D1,D2}:-0.169970127638;PDX1:-0.18548574253;BACH2:-0.191327375502;IRF7:-0.193635777682;AR:-0.222464122981;MED-1{core}:-0.249234696364;JUN:-0.251467581052;RFX1:-0.274260354264;PATZ1:-0.279969680083;HNF4A_NR2F1,2:-0.298834798475;ARID5B:-0.30402240268;PAX2:-0.311106352665;REST:-0.328878503063;GTF2A1,2:-0.336979189152;DBP:-0.34312612241;BPTF:-0.35861335307;NFIL3:-0.358735665731;IKZF2:-0.362534312205;RORA:-0.362914995509;TLX1..3_NFIC{dimer}:-0.381674787414;HOXA9_MEIS1:-0.389672031843;PAX3,7:-0.408400099959;MYBL2:-0.412887650604;HMGA1,2:-0.421844651183;SPIB:-0.472255000744;MAZ:-0.47651549043;XBP1:-0.483842491567;FOXD3:-0.485303914507;TAL1_TCF{3,4,12}:-0.491766092591;IKZF1:-0.501678565833;FOXP3:-0.503723142606;ATF6:-0.513685451011;ZIC1..3:-0.535785278092;DMAP1_NCOR{1,2}_SMARC:-0.558301579109;ELF1,2,4:-0.567957195596;RUNX1..3:-0.576513568686;PAX6:-0.601147119843;EGR1..3:-0.602144583604;UFEwm:-0.615081466712;ETS1,2:-0.61961639095;EVI1:-0.634448305669;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.639612512309;MTE{core}:-0.649907523304;GTF2I:-0.676192869474;ZNF238:-0.689509927007;KLF4:-0.704011161348;ZNF423:-0.720745299973;TFAP2{A,C}:-0.772890597116;EBF1:-0.781930016757;MTF1:-0.785825089362;STAT2,4,6:-0.790909231716;PPARG:-0.799572702334;NKX3-1:-0.806275816697;SPI1:-0.811239152203;POU3F1..4:-0.818853598557;TFCP2:-0.8241965023;NR1H4:-0.824767474329;ALX4:-0.835632962874;FOXO1,3,4:-0.8367269158;TGIF1:-0.838098928579;NHLH1,2:-0.845872687528;ESR1:-0.846001117019;RREB1:-0.857167157428;STAT1,3:-0.881883892917;EP300:-0.894079306384;SREBF1,2:-0.898486865806;HBP1_HMGB_SSRP1_UBTF:-0.902284087914;MAFB:-0.913575719825;PRDM1:-0.92890774872;GZF1:-1.00270641218;SRF:-1.00301266843;RXR{A,B,G}:-1.00546849586;GATA4:-1.04432027684;IRF1,2:-1.10830460773;NFATC1..3:-1.11958551263;PAX5:-1.12768149914;ZBTB6:-1.14384925923;NR3C1:-1.15032588894;MYFfamily:-1.19754347953;TFAP4:-1.25749200419;HMX1:-1.26794244733;MZF1:-1.31306067195;GLI1..3:-1.32404541114;GCM1,2:-1.37272488571;NFE2L1:-1.40854211249;SMAD1..7,9:-1.69496201693;SPZ1:-1.70819120427;RXRA_VDR{dimer}:-1.84088422594;NANOG{mouse}:-1.89309688382;TLX2:-2.15168987734
|top_motifs=VSX1,2:1.97229230821;ZEB1:1.70159751039;bHLH_family:1.59834580886;SNAI1..3:1.52834629764;ADNP_IRX_SIX_ZHX:1.27741057731;SP1:1.16379471212;NFY{A,B,C}:1.15100049767;E2F1..5:1.13761060669;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.11615612703;HSF1,2:0.990953606257;ATF4:0.970596174297;FOXQ1:0.961019148123;TFDP1:0.882305917064;CDX1,2,4:0.841467738632;PAX8:0.838739054656;RBPJ:0.819374133566;NANOG:0.756203913225;ELK1,4_GABP{A,B1}:0.735219013649;BREu{core}:0.729591423287;TP53:0.726291562429;NRF1:0.703427877638;POU2F1..3:0.701284778336;PITX1..3:0.698733293542;SOX2:0.69580937833;TBX4,5:0.694172690708;NR6A1:0.691176208718;CDC5L:0.581964216182;NKX2-3_NKX2-5:0.577457251715;LHX3,4:0.569896101612;SOX17:0.569372606181;ZNF143:0.565691251137;PBX1:0.550945281083;NR5A1,2:0.547173923182;PAX1,9:0.544437055032;STAT5{A,B}:0.508901735796;POU1F1:0.498852979435;TEF:0.478622398671;FOXP1:0.469753938159;ZFP161:0.467553831508;LMO2:0.465091088071;NKX3-2:0.445785783462;ZBTB16:0.443687969169;MYOD1:0.421931592006;AHR_ARNT_ARNT2:0.42181116711;ZNF384:0.420735316752;NKX2-2,8:0.419622507436;FOXA2:0.413032356195;FOXM1:0.409153988635;TBP:0.401487541147;FOX{I1,J2}:0.401362514493;HOX{A6,A7,B6,B7}:0.398455371121;FOX{F1,F2,J1}:0.389469789152;ONECUT1,2:0.380310926256;NFE2:0.372009789529;HOX{A4,D4}:0.331231084993;MYB:0.318361065251;CEBPA,B_DDIT3:0.30712635314;PAX4:0.298540255675;ESRRA:0.282383213145;ATF5_CREB3:0.280394194675;OCT4_SOX2{dimer}:0.266291685525;PRRX1,2:0.218250320087;POU5F1:0.217249256559;ZNF148:0.207379531175;NKX6-1,2:0.182722733636;HOX{A5,B5}:0.182644741793;FOXL1:0.172122513079;FOS_FOS{B,L1}_JUN{B,D}:0.14651094621;FOSL2:0.128329470398;FOXN1:0.103227305555;HNF1A:0.092986889651;XCPE1{core}:0.0729953679186;HIC1:0.0699631144989;CRX:0.0637579341751;HIF1A:0.0613455469397;RFX2..5_RFXANK_RFXAP:0.0240805387603;CREB1:0.0205070805529;LEF1_TCF7_TCF7L1,2:0.0159218789195;T:-0.00528874182479;CUX2:-0.023678757533;GATA6:-0.0257408433314;HAND1,2:-0.0274176945559;YY1:-0.0432579030912;GFI1B:-0.0436477473858;AIRE:-0.0478355180102;NFIX:-0.0531121545598;ATF2:-0.0785873386181;HES1:-0.0793254923594;NFKB1_REL_RELA:-0.0996713059684;NKX2-1,4:-0.113385617676;POU6F1:-0.115120490178;TEAD1:-0.1171294882;TOPORS:-0.121693574917;EN1,2:-0.124202985322;TFAP2B:-0.124731508529;SOX{8,9,10}:-0.13176541625;NFE2L2:-0.137092862983;MEF2{A,B,C,D}:-0.14087591809;ALX1:-0.141687615838;SOX5:-0.148724844636;HLF:-0.150080448756;GFI1:-0.162509112787;FOX{D1,D2}:-0.169970127638;PDX1:-0.18548574253;BACH2:-0.191327375502;IRF7:-0.193635777682;AR:-0.222464122981;MED-1{core}:-0.249234696364;JUN:-0.251467581052;RFX1:-0.274260354264;PATZ1:-0.279969680083;HNF4A_NR2F1,2:-0.298834798475;ARID5B:-0.30402240268;PAX2:-0.311106352665;REST:-0.328878503063;GTF2A1,2:-0.336979189152;DBP:-0.34312612241;BPTF:-0.35861335307;NFIL3:-0.358735665731;IKZF2:-0.362534312205;RORA:-0.362914995509;TLX1..3_NFIC{dimer}:-0.381674787414;HOXA9_MEIS1:-0.389672031843;PAX3,7:-0.408400099959;MYBL2:-0.412887650604;HMGA1,2:-0.421844651183;SPIB:-0.472255000744;MAZ:-0.47651549043;XBP1:-0.483842491567;FOXD3:-0.485303914507;TAL1_TCF{3,4,12}:-0.491766092591;IKZF1:-0.501678565833;FOXP3:-0.503723142606;ATF6:-0.513685451011;ZIC1..3:-0.535785278092;DMAP1_NCOR{1,2}_SMARC:-0.558301579109;ELF1,2,4:-0.567957195596;RUNX1..3:-0.576513568686;PAX6:-0.601147119843;EGR1..3:-0.602144583604;UFEwm:-0.615081466712;ETS1,2:-0.61961639095;EVI1:-0.634448305669;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.639612512309;MTE{core}:-0.649907523304;GTF2I:-0.676192869474;ZNF238:-0.689509927007;KLF4:-0.704011161348;ZNF423:-0.720745299973;TFAP2{A,C}:-0.772890597116;EBF1:-0.781930016757;MTF1:-0.785825089362;STAT2,4,6:-0.790909231716;PPARG:-0.799572702334;NKX3-1:-0.806275816697;SPI1:-0.811239152203;POU3F1..4:-0.818853598557;TFCP2:-0.8241965023;NR1H4:-0.824767474329;ALX4:-0.835632962874;FOXO1,3,4:-0.8367269158;TGIF1:-0.838098928579;NHLH1,2:-0.845872687528;ESR1:-0.846001117019;RREB1:-0.857167157428;STAT1,3:-0.881883892917;EP300:-0.894079306384;SREBF1,2:-0.898486865806;HBP1_HMGB_SSRP1_UBTF:-0.902284087914;MAFB:-0.913575719825;PRDM1:-0.92890774872;GZF1:-1.00270641218;SRF:-1.00301266843;RXR{A,B,G}:-1.00546849586;GATA4:-1.04432027684;IRF1,2:-1.10830460773;NFATC1..3:-1.11958551263;PAX5:-1.12768149914;ZBTB6:-1.14384925923;NR3C1:-1.15032588894;MYFfamily:-1.19754347953;TFAP4:-1.25749200419;HMX1:-1.26794244733;MZF1:-1.31306067195;GLI1..3:-1.32404541114;GCM1,2:-1.37272488571;NFE2L1:-1.40854211249;SMAD1..7,9:-1.69496201693;SPZ1:-1.70819120427;RXRA_VDR{dimer}:-1.84088422594;NANOG{mouse}:-1.89309688382;TLX2:-2.15168987734
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10550-107I1;search_select_hide=table117:FF:10550-107I1
}}
}}

Latest revision as of 14:28, 3 June 2020

Name:oral squamous cell carcinoma cell line:HO-1-u-1
Species:Human (Homo sapiens)
Library ID:CNhs11287
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuegum
dev stageNA
sexunknown
ageNA
cell typeunclassifiable
cell lineHO-1-u-1
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005382
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11287 CAGE DRX007973 DRR008845
Accession ID Hg19

Library idBAMCTSS
CNhs11287 DRZ000270 DRZ001655
Accession ID Hg38

Library idBAMCTSS
CNhs11287 DRZ011620 DRZ013005
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0841
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.492
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.0416
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0358
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.197
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0.0484
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.243
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.459
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.092
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0484
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0.0484
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.45
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11287

Jaspar motifP-value
MA0002.20.0012
MA0003.10.218
MA0004.10.186
MA0006.10.402
MA0007.10.764
MA0009.10.297
MA0014.10.0428
MA0017.10.343
MA0018.20.0162
MA0019.10.732
MA0024.12.66232e-4
MA0025.10.555
MA0027.10.119
MA0028.10.037
MA0029.10.0756
MA0030.10.297
MA0031.10.118
MA0035.20.0745
MA0038.12.32456e-4
MA0039.23.71953e-4
MA0040.10.516
MA0041.10.647
MA0042.10.694
MA0043.10.00253
MA0046.10.577
MA0047.20.112
MA0048.10.189
MA0050.11.27532e-7
MA0051.15.30532e-5
MA0052.10.117
MA0055.18.56634e-5
MA0057.10.734
MA0058.10.277
MA0059.10.289
MA0060.11.02741e-19
MA0061.10.0749
MA0062.20.0349
MA0065.20.905
MA0066.10.122
MA0067.10.494
MA0068.10.386
MA0069.10.719
MA0070.10.17
MA0071.10.618
MA0072.10.604
MA0073.10.409
MA0074.10.689
MA0076.10.0225
MA0077.10.206
MA0078.10.295
MA0079.20.804
MA0080.21.76726e-8
MA0081.10.101
MA0083.10.225
MA0084.10.378
MA0087.10.694
MA0088.10.471
MA0090.10.648
MA0091.10.00203
MA0092.10.148
MA0093.10.174
MA0099.20.599
MA0100.10.503
MA0101.10.789
MA0102.20.765
MA0103.13.48759e-5
MA0104.20.00201
MA0105.10.00405
MA0106.10.173
MA0107.10.355
MA0108.20.28
MA0111.10.99
MA0112.20.0359
MA0113.10.114
MA0114.10.968
MA0115.10.78
MA0116.10.0155
MA0117.10.56
MA0119.10.224
MA0122.10.603
MA0124.10.928
MA0125.10.0365
MA0131.10.453
MA0135.10.726
MA0136.11.04228e-4
MA0137.20.274
MA0138.20.303
MA0139.10.679
MA0140.10.067
MA0141.10.835
MA0142.10.0738
MA0143.10.869
MA0144.10.425
MA0145.10.364
MA0146.10.888
MA0147.10.004
MA0148.10.0565
MA0149.10.0687
MA0150.10.368
MA0152.10.817
MA0153.10.346
MA0154.10.022
MA0155.10.132
MA0156.10.0484
MA0157.10.284
MA0159.10.945
MA0160.10.573
MA0162.10.784
MA0163.10.0619
MA0164.10.43
MA0258.10.0962
MA0259.10.0321



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11287

Novel motifP-value
10.504
100.515
1000.147
1010.713
1020.477
1030.337
1040.447
1050.0913
1060.00109
1070.174
1080.972
1090.627
110.175
1100.511
1110.548
1120.0458
1130.558
1140.201
1150.98
1160.118
1170.901
1180.465
1190.166
120.687
1200.364
1210.65
1220.242
1230.762
1240.832
1250.829
1260.636
1270.953
1280.0253
1290.598
130.0442
1300.277
1310.38
1320.623
1330.00265
1340.367
1350.236
1360.0268
1370.153
1380.388
1390.0827
140.523
1400.316
1410.25
1420.739
1430.43
1440.327
1450.399
1460.403
1470.905
1480.221
1490.0294
150.528
1500.591
1510.38
1520.296
1530.561
1540.102
1550.747
1560.807
1570.883
1580.944
1590.43
160.483
1600.517
1610.559
1620.9
1630.195
1640.339
1650.636
1660.422
1670.144
1680.513
1690.124
170.656
180.117
190.0557
20.133
200.209
210.494
220.185
230.144
240.51
250.974
260.422
270.165
280.549
290.842
30.44
300.755
310.468
320.00113
330.413
340.267
350.175
360.212
370.323
380.665
390.963
40.224
400.0767
410.361
420.81
430.129
440.501
450.708
460.0788
470.642
480.901
490.493
50.298
500.641
510.243
520.476
530.493
540.315
550.266
560.633
570.778
580.536
590.0245
60.737
600.281
610.539
620.115
630.558
640.882
650.0834
662.28466e-5
670.672
680.3
690.604
70.823
700.0534
710.635
720.325
730.284
740.0947
750.877
760.849
770.0611
780.449
790.0231
80.41
800.0432
810.126
820.00214
830.189
840.844
850.00345
860.274
870.187
880.943
890.0751
90.015
900.308
910.0252
920.0236
930.712
940.0514
950.607
960.132
970.741
980.569
990.551



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11287


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002251 (epithelial cell of alimentary canal)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
7 (disease of anatomical entity)
305 (carcinoma)
1749 (squamous cell carcinoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0003343 (mucosa of oral region)
0000033 (head)
0000974 (neck)
0001007 (digestive system)
0000344 (mucosa)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0004119 (endoderm-derived structure)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0004923 (organ component layer)
0000161 (orifice)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0004785 (respiratory system mucosa)
0003729 (mouth mucosa)
0010317 (germ layer / neural crest derived structure)
0001555 (digestive tract)
0001004 (respiratory system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000165 (mouth)
0000166 (oral opening)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0102024 (squamous cell carcinoma cell line sample)
0101120 (epithelial cell line sample)
0102211 (oral squamous cell carcinoma cell line sample)
0102027 (oral cancer cell line sample)
0102709 (head and neck squamous cell carcinoma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000223 (endodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006595 (presumptive endoderm)
UBERON:0010316 (germ layer / neural crest)

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