FFCP PHASE1:Mm9::chr3:7366589..7366594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18767 | |EntrezGene=18767 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=295 | |||
|TSSclassifier=NA | |||
|UniProt=P63248,Q3UTL0 | |UniProt=P63248,Q3UTL0 | ||
|association_with_transcript=-9bp_to_ENSMUST00000028999,NM_008862,uc008oof.1_5end | |association_with_transcript=-9bp_to_ENSMUST00000028999,NM_008862,uc008oof.1_5end | ||
|cluster_id=chr3:7366589..7366594,+ | |||
|description=CAGE_peak_4_at_Pkia_5end | |description=CAGE_peak_4_at_Pkia_5end | ||
|id=chr3:7366589..7366594,+ | |id=chr3:7366589..7366594,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.60e-14!23;CL:0000337!1.60e-14!23;CL:0000540!6.52e-10!33;CL:0000047!6.52e-10!33;CL:0000031!6.52e-10!33;CL:0000404!6.52e-10!33;CL:0000393!2.12e-09!39;CL:0000211!2.12e-09!39 | |ontology_enrichment_celltype=CL:0000117!1.60e-14!23;CL:0000337!1.60e-14!23;CL:0000540!6.52e-10!33;CL:0000047!6.52e-10!33;CL:0000031!6.52e-10!33;CL:0000404!6.52e-10!33;CL:0000393!2.12e-09!39;CL:0000211!2.12e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-26,23;CL:0000337,1.01e-26,23;CL:0000540,5.55e-17,33;CL:0000047,5.55e-17,33;CL:0000031,5.55e-17,33;CL:0000404,5.55e-17,33;CL:0000393,1.47e-13,39;CL:0000211,1.47e-13,39;CL:0002319,8.12e-12,43;CL:0000221,1.97e-11,44;CL:0000133,1.97e-11,44;CL:0002609,5.63e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.43e-22!52;UBERON:0005068!8.43e-22!52;UBERON:0006241!8.43e-22!52;UBERON:0007135!8.43e-22!52;UBERON:0000033!3.18e-21!63;UBERON:0000955!8.26e-21!50;UBERON:0006238!8.26e-21!50;UBERON:0002616!3.96e-20!49;UBERON:0001017!6.32e-20!73;UBERON:0005743!6.32e-20!73;UBERON:0000073!6.94e-20!75;UBERON:0001016!6.94e-20!75;UBERON:0002020!4.90e-19!34;UBERON:0002346!6.33e-18!71;UBERON:0003075!6.33e-18!71;UBERON:0007284!6.33e-18!71;UBERON:0003056!1.21e-17!49;UBERON:0003080!6.84e-17!40;UBERON:0004121!9.44e-17!102;UBERON:0000924!9.44e-17!102;UBERON:0006601!9.44e-17!102;UBERON:0002780!2.93e-16!39;UBERON:0001890!2.93e-16!39;UBERON:0006240!2.93e-16!39;UBERON:0002791!4.82e-16!29;UBERON:0003528!4.82e-16!29;UBERON:0001893!4.82e-16!29;UBERON:0000956!2.33e-11!21;UBERON:0001869!2.33e-11!21;UBERON:0000203!2.33e-11!21;UBERON:0007811!1.59e-09!86;UBERON:0002619!8.70e-09!17;UBERON:0000025!9.09e-09!114;UBERON:0000153!1.65e-08!94;UBERON:0004111!5.07e-08!122;UBERON:0002021!6.46e-08!10;UBERON:0000411!6.46e-08!10;UBERON:0001950!6.46e-08!10 | |ontology_enrichment_uberon=UBERON:0001049!8.43e-22!52;UBERON:0005068!8.43e-22!52;UBERON:0006241!8.43e-22!52;UBERON:0007135!8.43e-22!52;UBERON:0000033!3.18e-21!63;UBERON:0000955!8.26e-21!50;UBERON:0006238!8.26e-21!50;UBERON:0002616!3.96e-20!49;UBERON:0001017!6.32e-20!73;UBERON:0005743!6.32e-20!73;UBERON:0000073!6.94e-20!75;UBERON:0001016!6.94e-20!75;UBERON:0002020!4.90e-19!34;UBERON:0002346!6.33e-18!71;UBERON:0003075!6.33e-18!71;UBERON:0007284!6.33e-18!71;UBERON:0003056!1.21e-17!49;UBERON:0003080!6.84e-17!40;UBERON:0004121!9.44e-17!102;UBERON:0000924!9.44e-17!102;UBERON:0006601!9.44e-17!102;UBERON:0002780!2.93e-16!39;UBERON:0001890!2.93e-16!39;UBERON:0006240!2.93e-16!39;UBERON:0002791!4.82e-16!29;UBERON:0003528!4.82e-16!29;UBERON:0001893!4.82e-16!29;UBERON:0000956!2.33e-11!21;UBERON:0001869!2.33e-11!21;UBERON:0000203!2.33e-11!21;UBERON:0007811!1.59e-09!86;UBERON:0002619!8.70e-09!17;UBERON:0000025!9.09e-09!114;UBERON:0000153!1.65e-08!94;UBERON:0004111!5.07e-08!122;UBERON:0002021!6.46e-08!10;UBERON:0000411!6.46e-08!10;UBERON:0001950!6.46e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.88e-47,54;UBERON:0001049,2.34e-41,52;UBERON:0005068,2.34e-41,52;UBERON:0006241,2.34e-41,52;UBERON:0007135,2.34e-41,52;UBERON:0002020,8.45e-41,34;UBERON:0001017,2.20e-40,73;UBERON:0001016,5.01e-39,75;UBERON:0000955,1.19e-38,47;UBERON:0006238,1.19e-38,47;UBERON:0002616,4.98e-37,46;UBERON:0003528,9.25e-36,29;UBERON:0002791,9.25e-36,29;UBERON:0001893,9.25e-36,29;UBERON:0003080,4.03e-33,40;UBERON:0002346,8.53e-32,64;UBERON:0003075,8.53e-32,64;UBERON:0007284,8.53e-32,64;UBERON:0002780,1.37e-31,39;UBERON:0001890,1.37e-31,39;UBERON:0006240,1.37e-31,39;UBERON:0004121,1.39e-28,95;UBERON:0000924,1.39e-28,95;UBERON:0006601,1.39e-28,95;UBERON:0010371,1.09e-26,73;UBERON:0000956,2.33e-26,21;UBERON:0001869,2.33e-26,21;UBERON:0000203,2.33e-26,21;UBERON:0003056,1.46e-25,49;UBERON:0002619,7.95e-20,17;UBERON:0010314,3.33e-19,92;UBERON:0002021,1.11e-17,10;UBERON:0000411,1.11e-17,10;UBERON:0001950,1.11e-17,10;UBERON:0000025,1.31e-14,114;UBERON:0004111,5.04e-13,122;UBERON:0002420,3.09e-10,8;UBERON:0007245,3.09e-10,8;UBERON:0010009,3.09e-10,8;UBERON:0010011,3.09e-10,8;UBERON:0000454,3.09e-10,8;UBERON:0000369,8.10e-09,5;UBERON:0002435,8.10e-09,5;UBERON:0000204,8.10e-09,5;UBERON:0010082,8.10e-09,5;UBERON:0011216,1.42e-08,194;UBERON:0003076,2.55e-08,12;UBERON:0003057,2.55e-08,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0.515672092277442,2.02316460859598,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,2.7996195323289,2.8351247049655,3.78584930432488,1.14260393761521,0.883474163806454,4.89963196859816,2.49198224647415,0.919218786610021,3.30347642998166,2.042997409363,1.22885226604995,1.97829431595291,1.82975287204819,1.56274011167028,0.837548997004143,3.37657566019008,1.98637722109853,3.83017161115768,3.41692033917847,2.42319279572891,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0.681721290312231,0.259786004602869,0.35333957451034,0.704217098883403,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0,0.441683036920787,0.484875253135222,0,2.92780797011547,3.97948742945565,0,0,0,0,2.69623150928681,2.28750301409313,13.0680526197379,2.9550134432687,4.09144731728529,1.24672826735736,2.92034273521964,0.509196819251581,0,1.0108910337347,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,0.204109497453984,0.768682321709099,0.655912071918102,0.776110112217047,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.729619285912702,0.146199987425332,0.219550115291051,0.402619256281115,6.30869845692382,8.84979666461846,0,0,0,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0.31399745568275,0.493588655687202,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0,0.788175720530955,0.221464689648775,0.159454768657487,0.655453258862952,0.172684981865896,0,0,0,0,0,1.28440471990234,1.05490517932983,0,0,0,0.390438744296638,0,0,0,0.566153061577665,0,0.292255857911312,0.395287777946524,2.89189184779626,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.388076051348264,0.214337035031592,0,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.49465875882444,0.161464426695906,0.180938774784468,0.238744688006273,0,0,0.927126510052548,0,0.412773735926445,0,0,0,0.228778173206523,0.169978429993855,0.419854356970974,0,0.954670618015114,0.158167996790568,0.406638934253697,0,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0.598066184175915,0,0.777804753376191,0.387479470433193,0.337912250981556,0.938857909166032,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0.221985953374065,0,0,0.19318959403219,0,0.183151624267265,0,0,6.21227026878773,1.84130094602871,5.15605962095457,2.92150409984269,4.11049511862385,5.2877572817279,2.02506750069542,2.70192721934532,3.17199686288943,1.55328093525546,0.207574695168353,1.19707462020309,0.341467211508268,0.486213434136588,1.04806581313991,1.10306105070008,0.888986911206461,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.754505365544305,0.468207537349412,0.576226371643824,0.459483751644906,0.476293691283074,0.579421629724277,0.578727661391115,1.23625770240992,0.588795680537589,1.37147700954166,0,0.476872379894642,0.436039249896986,0.658765662907314,0.761531471025089,0.365855945745545,0.789209134313529,0.950628796921032,0.561142271657738,0.830445126869219,0.788035859004508,1.22769312950907,0.619747364743864,0.578719832943424,0.999242311751784,0.467863216890817,0,0.382576664137687,0,0.695603506861264 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0.573066879877513,0.515672092277442,2.02316460859598,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,2.7996195323289,2.8351247049655,3.78584930432488,1.14260393761521,0.883474163806454,4.89963196859816,2.49198224647415,0.919218786610021,3.30347642998166,2.042997409363,1.22885226604995,1.97829431595291,1.82975287204819,1.56274011167028,0.837548997004143,3.37657566019008,1.98637722109853,3.83017161115768,3.41692033917847,2.42319279572891,0.151452386666368,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0.681721290312231,0.259786004602869,0.35333957451034,0.704217098883403,0,0,0,0.216491041011214,0,0,0.34255163915718,0,0,0,0,0,0.150722640552623,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0,0.441683036920787,0.484875253135222,0,2.92780797011547,3.97948742945565,0,0,0,0,2.69623150928681,2.28750301409313,13.0680526197379,2.9550134432687,4.09144731728529,1.24672826735736,2.92034273521964,0.509196819251581,0,1.0108910337347,0.420883711772948,0.130120442962704,0.229902104433473,0.360124259610698,0.30140963567143,0.204109497453984,0.768682321709099,0.655912071918102,0.776110112217047,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0.36012412292203,0,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.729619285912702,0.146199987425332,0.219550115291051,0.402619256281115,6.30869845692382,8.84979666461846,0,0,0,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0.193952487167626,0.140271639780637,0.252946148497029,0.147610147979602,0.31399745568275,0.493588655687202,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0,0.788175720530955,0.221464689648775,0.159454768657487,0.655453258862952,0.172684981865896,0,0,0,0,0,1.28440471990234,1.05490517932983,0,0,0,0.390438744296638,0,0,0,0.566153061577665,0,0.292255857911312,0.395287777946524,2.89189184779626,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.388076051348264,0.214337035031592,0,0.356737635204141,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.49465875882444,0.161464426695906,0.180938774784468,0.238744688006273,0,0,0.927126510052548,0,0.412773735926445,0,0,0,0.228778173206523,0.169978429993855,0.419854356970974,0,0.954670618015114,0.158167996790568,0.406638934253697,0,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0.598066184175915,0,0.777804753376191,0.387479470433193,0.337912250981556,0.938857909166032,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0.221985953374065,0,0,0.19318959403219,0,0.183151624267265,0,0,6.21227026878773,1.84130094602871,5.15605962095457,2.92150409984269,4.11049511862385,5.2877572817279,2.02506750069542,2.70192721934532,3.17199686288943,1.55328093525546,0.207574695168353,1.19707462020309,0.341467211508268,0.486213434136588,1.04806581313991,1.10306105070008,0.888986911206461,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.754505365544305,0.468207537349412,0.576226371643824,0.459483751644906,0.476293691283074,0.579421629724277,0.578727661391115,1.23625770240992,0.588795680537589,1.37147700954166,0,0.476872379894642,0.436039249896986,0.658765662907314,0.761531471025089,0.365855945745545,0.789209134313529,0.950628796921032,0.561142271657738,0.830445126869219,0.788035859004508,1.22769312950907,0.619747364743864,0.578719832943424,0.999242311751784,0.467863216890817,0,0.382576664137687,0,0.695603506861264 | ||
|short_description=p4@Pkia | |short_description=p4@Pkia | ||
}} | }} |
Latest revision as of 16:46, 25 September 2015
Short description: | p4@Pkia |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pkia_5end |
Coexpression cluster: | MCL_coexpression_mm9:295 |
Association with transcript: | -9bp_to_ENSMUST00000028999, NM_008862, uc008oof.1_5end |
EntrezGene: | Pkia |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.01e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-26 | 23 |
neuron | 5.55e-17 | 33 |
neuronal stem cell | 5.55e-17 | 33 |
neuroblast | 5.55e-17 | 33 |
electrically signaling cell | 5.55e-17 | 33 |
electrically responsive cell | 1.47e-13 | 39 |
electrically active cell | 1.47e-13 | 39 |
neural cell | 8.12e-12 | 43 |
ectodermal cell | 1.97e-11 | 44 |
neurectodermal cell | 1.97e-11 | 44 |
neuron of cerebral cortex | 5.63e-08 | 6 |