FFCP PHASE1:Hg19::chr10:90974368..90974396,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90974368..90974396,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr10:90974368..90974396,- | |description=CAGE_peak_at_chr10:90974368..90974396,- | ||
|id=chr10:90974368..90974396,- | |id=chr10:90974368..90974396,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;4.18e-55;6!CL:0000840;9.14e-15;5!CL:0000511;2.87e-10;1!CL:0002625;2.87e-10;1!CL:0000216;2.87e-10;1!CL:0000990;5.08e-10;8!CL:0000451;2.76e-08;10!CL:0000473;3.60e-07;39!CL:0000234;3.60e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.01e-55,6;CL:0000840,9.15e-15,5;CL:0001029,9.15e-15,5;CL:0002194,5.92e-14,59;CL:0000576,5.92e-14,59;CL:0000040,5.92e-14,59;CL:0000559,5.92e-14,59;CL:0002009,1.87e-13,61;CL:0000839,2.45e-12,66;CL:0000557,3.91e-12,67;CL:0000766,3.37e-11,72;CL:0000511,1.89e-10,1;CL:0002625,1.89e-10,1;CL:0000216,1.89e-10,1;CL:0000990,5.09e-10,8;CL:0000451,2.76e-08,10;CL:0002087,7.08e-08,115;CL:0002031,1.77e-07,120;CL:0000763,5.39e-07,108;CL:0000049,5.39e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.87e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.03e-13;3!DOID:127;4.03e-13;3!DOID:0060072;4.55e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,5.15e-13,3;DOID:127,5.15e-13,3;DOID:0060072,5.46e-10,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.87e-10;1!UBERON:0000941;2.87e-10;1!UBERON:0001343;2.87e-10;1!UBERON:0001785;2.87e-10;1!UBERON:0002464;2.87e-10;1!UBERON:0004904;2.87e-10;1!UBERON:0001021;2.87e-10;1!UBERON:0004910;2.87e-10;1!UBERON:0004813;2.87e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.54e-10,76;UBERON:0001136,1.89e-10,1;UBERON:0001343,1.89e-10,1;UBERON:0004910,1.89e-10,1;UBERON:0005154,1.89e-10,1;UBERON:0005295,1.89e-10,1;UBERON:0004813,1.89e-10,1;UBERON:0005297,1.89e-10,1;UBERON:0005294,1.89e-10,1;UBERON:0010141,1.89e-10,1;UBERON:0005891,1.89e-10,1;UBERON:0000941,2.50e-10,1;UBERON:0001785,2.50e-10,1;UBERON:0002464,2.50e-10,1;UBERON:0004904,2.50e-10,1;UBERON:0001021,2.50e-10,1;UBERON:0003902,2.50e-10,1;UBERON:0005425,2.50e-10,1;UBERON:0001474,1.15e-09,82;UBERON:0004765,1.11e-08,90;UBERON:0002405,2.35e-08,93;UBERON:0002390,7.43e-08,98;UBERON:0003061,7.43e-08,98;UBERON:0001434,1.14e-07,100;UBERON:0002193,5.39e-07,108 | |||
|phase1_expression=0,1.07050261945492,0,0,0,0.872338524100369,0,0,0.783556884599516,0,0,0,0,0,0.994192127183747,0.672325146451775,0,0,0,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0,1.34349284543955,0.971680998056939,0.77272670290256,0,0.377875943688809,0,0,0,0.309706370895104,0,0.512321413058201,0,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0.425208599930087,0.209658645508376,0,0.450530678524519,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,1.94826728407911,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0.0945348171640679,0,0.351339142772504,0.0654895377488563,0.364295288292542,0,12.9818957461873,9.92539502605823,20.0766520383486,0,0,0,0,0,0,0.56530794192401,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0,1.43418310374407,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.302714855289863,0.576175924479999,0,0.312160076830321,0,0.298897361103602,0.117434498643765,0,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0.323292113637624,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0.441463099414651,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,3.69325509131096,2.10603838625314,2.52672975890838,0.93733833986777,0.335964256397719,0,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0,0,0,0.308482478109971,0.300343057843917,0.857479297891735,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,10.9461402577071,5.52482800575339,18.9750545534728,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,0,0,0,0,0,0,0,0.260650843404249,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0.177561725313127,0,0,0.232420756919918,0,0.40101294060657,0.184161977871793,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.290033387828457,0.511359764496605,0,0,0.384380134730212,0,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0.539617372749944,0.274537029736055,0.353437207037059,0,1.58510321173008,0,0,0.243713489631284,0,0,0.282810863907425,0,0,0,0.438450885253763,0.578775534266688,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0.586032717087576,0,0,0,0,0,0,0,0,0.222617410045812,0,0.211125408127993,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0,0.067401132980677,0,0,0.547364367646998,0,0.971121518136371,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0.347119476670262,0,0,0,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.202210631562555,0.0984274815147488,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0,0,0,0,1.08599920350743,5.18532894720761,0.979762080328227,0,0,0,0,0.293104467356165,1.32506888912221,0,0.13223260174269,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,1.40500471742064,0,0,0,0.554805861502613,0,0.251567901752575,0,0.228840068396924,0.604923695052956,0.310874401165561,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.181848659202559,0.322231671127465,0,0,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0.260994291965212,0,0,0.244736704506468,0,0.308801447160972,0,0.353378291891762,0.578742114812744,0.337884881306145,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,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| ||
|short_description=p@chr10:90974368..90974396,- | |short_description=p@chr10:90974368..90974396,- | ||
}} | }} |
Latest revision as of 16:33, 23 July 2015
Short description: | p@chr10:90974368..90974396, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90974368..90974396, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.01e-55 | 6 |
immature conventional dendritic cell | 9.15e-15 | 5 |
common dendritic progenitor | 9.15e-15 | 5 |
monopoietic cell | 5.92e-14 | 59 |
monocyte | 5.92e-14 | 59 |
monoblast | 5.92e-14 | 59 |
promonocyte | 5.92e-14 | 59 |
macrophage dendritic cell progenitor | 1.87e-13 | 61 |
myeloid lineage restricted progenitor cell | 2.45e-12 | 66 |
granulocyte monocyte progenitor cell | 3.91e-12 | 67 |
myeloid leukocyte | 3.37e-11 | 72 |
androgen binding protein secreting cell | 1.89e-10 | 1 |
seminiferous tubule epithelial cell | 1.89e-10 | 1 |
Sertoli cell | 1.89e-10 | 1 |
conventional dendritic cell | 5.09e-10 | 8 |
dendritic cell | 2.76e-08 | 10 |
nongranular leukocyte | 7.08e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.77e-07 | 120 |
myeloid cell | 5.39e-07 | 108 |
common myeloid progenitor | 5.39e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.54e-10 | 76 |
mesothelium | 1.89e-10 | 1 |
seminiferous tubule of testis | 1.89e-10 | 1 |
epithelium of male gonad | 1.89e-10 | 1 |
epithelial cord | 1.89e-10 | 1 |
sex cord | 1.89e-10 | 1 |
seminiferous tubule epithelium | 1.89e-10 | 1 |
testis sex cord | 1.89e-10 | 1 |
genital ridge | 1.89e-10 | 1 |
primitive sex cord of indifferent gonad | 1.89e-10 | 1 |
coelomic epithelium | 1.89e-10 | 1 |
cranial nerve II | 2.50e-10 | 1 |
cranial nerve | 2.50e-10 | 1 |
nerve trunk | 2.50e-10 | 1 |
nerve connecting eye with brain | 2.50e-10 | 1 |
nerve | 2.50e-10 | 1 |
retinal neural layer | 2.50e-10 | 1 |
presumptive neural retina | 2.50e-10 | 1 |
bone element | 1.15e-09 | 82 |
skeletal element | 1.11e-08 | 90 |
immune system | 2.35e-08 | 93 |
hematopoietic system | 7.43e-08 | 98 |
blood island | 7.43e-08 | 98 |
skeletal system | 1.14e-07 | 100 |
hemolymphoid system | 5.39e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 5.15e-13 | 3 |
leiomyoma | 5.15e-13 | 3 |
benign neoplasm | 5.46e-10 | 4 |