FFCP PHASE1:Hg19::chr11:70507888..70507899,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22941 | |EntrezGene=22941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14295 | |HGNC=14295 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUA2,C9JW40 | |UniProt=E7EUA2,C9JW40 | ||
|association_with_transcript=-19bp_to_ENST00000409161,ENST00000409530_5end | |association_with_transcript=-19bp_to_ENST00000409161,ENST00000409530_5end | ||
|cluster_id=chr11:70507888..70507899,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_SHANK2_5end | |description=CAGE_peak_13_at_SHANK2_5end | ||
|id=chr11:70507888..70507899,- | |id=chr11:70507888..70507899,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;4.73e-37;2!UBERON:0006601;6.55e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.27e-70!41;UBERON:0001890!2.27e-70!41;UBERON:0006240!2.27e-70!41;UBERON:0001893!1.00e-68!34;UBERON:0003080!1.47e-68!42;UBERON:0001869!7.53e-68!32;UBERON:0002791!3.03e-65!33;UBERON:0001049!6.86e-60!57;UBERON:0005068!6.86e-60!57;UBERON:0006241!6.86e-60!57;UBERON:0007135!6.86e-60!57;UBERON:0000073!1.57e-59!94;UBERON:0001016!1.57e-59!94;UBERON:0002020!2.81e-58!34;UBERON:0003528!2.81e-58!34;UBERON:0002616!1.27e-57!59;UBERON:0001017!1.17e-56!82;UBERON:0005743!1.23e-56!86;UBERON:0002619!3.52e-56!22;UBERON:0000955!4.78e-54!69;UBERON:0006238!4.78e-54!69;UBERON:0003056!8.49e-52!61;UBERON:0000956!4.05e-49!25;UBERON:0000203!4.05e-49!25;UBERON:0001950!5.30e-49!20;UBERON:0003075!3.39e-45!86;UBERON:0007284!3.39e-45!86;UBERON:0002346!7.93e-43!90;UBERON:0007023!1.55e-36!115;UBERON:0000033!8.36e-31!123;UBERON:0004121!2.67e-29!169;UBERON:0000153!5.47e-29!129;UBERON:0007811!5.47e-29!129;UBERON:0000924!2.07e-28!173;UBERON:0006601!2.07e-28!173;UBERON:0000200!5.14e-23!6;UBERON:0001871!2.11e-22!7;UBERON:0002420!5.04e-21!9;UBERON:0007245!5.04e-21!9;UBERON:0010009!5.04e-21!9;UBERON:0010011!5.04e-21!9;UBERON:0000454!5.04e-21!9;UBERON:0000349!4.71e-20!5;UBERON:0000025!1.03e-17!194;UBERON:0000369!8.44e-17!4;UBERON:0002435!8.44e-17!4;UBERON:0000204!8.44e-17!4;UBERON:0010082!8.44e-17!4;UBERON:0009663!2.84e-14!7;UBERON:0004111!1.50e-13!241;UBERON:0005383!4.53e-13!3;UBERON:0005382!4.53e-13!3;UBERON:0002021!1.51e-12!5;UBERON:0002771!3.90e-12!3;UBERON:0002308!5.11e-11!9;UBERON:0000125!5.11e-11!9;UBERON:0000477!6.99e-11!286;UBERON:0000483!3.89e-10!309;UBERON:0000119!5.95e-10!312;UBERON:0000064!7.11e-10!219;UBERON:0001873!2.83e-09!2;UBERON:0010122!2.83e-09!2;UBERON:0001954!4.36e-09!2;UBERON:0003022!4.36e-09!2;UBERON:0002421!4.36e-09!2;UBERON:0002600!4.36e-09!2;UBERON:0001876!5.95e-09!2;UBERON:0001870!8.10e-09!2;UBERON:0000481!6.34e-08!347;UBERON:0000475!8.00e-08!365;UBERON:0001872!1.04e-07!5;UBERON:0000013!3.47e-07!5;UBERON:0002410!3.47e-07!5;UBERON:0000922!8.61e-07!612 | |ontology_enrichment_uberon=UBERON:0002780!2.27e-70!41;UBERON:0001890!2.27e-70!41;UBERON:0006240!2.27e-70!41;UBERON:0001893!1.00e-68!34;UBERON:0003080!1.47e-68!42;UBERON:0001869!7.53e-68!32;UBERON:0002791!3.03e-65!33;UBERON:0001049!6.86e-60!57;UBERON:0005068!6.86e-60!57;UBERON:0006241!6.86e-60!57;UBERON:0007135!6.86e-60!57;UBERON:0000073!1.57e-59!94;UBERON:0001016!1.57e-59!94;UBERON:0002020!2.81e-58!34;UBERON:0003528!2.81e-58!34;UBERON:0002616!1.27e-57!59;UBERON:0001017!1.17e-56!82;UBERON:0005743!1.23e-56!86;UBERON:0002619!3.52e-56!22;UBERON:0000955!4.78e-54!69;UBERON:0006238!4.78e-54!69;UBERON:0003056!8.49e-52!61;UBERON:0000956!4.05e-49!25;UBERON:0000203!4.05e-49!25;UBERON:0001950!5.30e-49!20;UBERON:0003075!3.39e-45!86;UBERON:0007284!3.39e-45!86;UBERON:0002346!7.93e-43!90;UBERON:0007023!1.55e-36!115;UBERON:0000033!8.36e-31!123;UBERON:0004121!2.67e-29!169;UBERON:0000153!5.47e-29!129;UBERON:0007811!5.47e-29!129;UBERON:0000924!2.07e-28!173;UBERON:0006601!2.07e-28!173;UBERON:0000200!5.14e-23!6;UBERON:0001871!2.11e-22!7;UBERON:0002420!5.04e-21!9;UBERON:0007245!5.04e-21!9;UBERON:0010009!5.04e-21!9;UBERON:0010011!5.04e-21!9;UBERON:0000454!5.04e-21!9;UBERON:0000349!4.71e-20!5;UBERON:0000025!1.03e-17!194;UBERON:0000369!8.44e-17!4;UBERON:0002435!8.44e-17!4;UBERON:0000204!8.44e-17!4;UBERON:0010082!8.44e-17!4;UBERON:0009663!2.84e-14!7;UBERON:0004111!1.50e-13!241;UBERON:0005383!4.53e-13!3;UBERON:0005382!4.53e-13!3;UBERON:0002021!1.51e-12!5;UBERON:0002771!3.90e-12!3;UBERON:0002308!5.11e-11!9;UBERON:0000125!5.11e-11!9;UBERON:0000477!6.99e-11!286;UBERON:0000483!3.89e-10!309;UBERON:0000119!5.95e-10!312;UBERON:0000064!7.11e-10!219;UBERON:0001873!2.83e-09!2;UBERON:0010122!2.83e-09!2;UBERON:0001954!4.36e-09!2;UBERON:0003022!4.36e-09!2;UBERON:0002421!4.36e-09!2;UBERON:0002600!4.36e-09!2;UBERON:0001876!5.95e-09!2;UBERON:0001870!8.10e-09!2;UBERON:0000481!6.34e-08!347;UBERON:0000475!8.00e-08!365;UBERON:0001872!1.04e-07!5;UBERON:0000013!3.47e-07!5;UBERON:0002410!3.47e-07!5;UBERON:0000922!8.61e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0000369;3.21e-72;4!UBERON:0002435;3.21e-72;4!UBERON:0000204;3.21e-72;4!UBERON:0005383;7.91e-55;3!UBERON:0005382;7.91e-55;3!UBERON:0001893;4.40e-52;34!UBERON:0001869;1.74e-51;32!UBERON:0002420;5.34e-50;9!UBERON:0007245;5.34e-50;9!UBERON:0010009;5.34e-50;9!UBERON:0010011;5.34e-50;9!UBERON:0000454;5.34e-50;9!UBERON:0002791;2.81e-47;32!UBERON:0003528;3.90e-46;34!UBERON:0002020;3.90e-46;34!UBERON:0009663;1.49e-41;7!UBERON:0001873;4.73e-37;2!UBERON:0002780;8.14e-34;41!UBERON:0001890;8.14e-34;41!UBERON:0000349;4.30e-33;5!UBERON:0000125;1.90e-32;9!UBERON:0002308;1.90e-32;9!UBERON:0002619;5.54e-28;22!UBERON:0000073;2.96e-26;53!UBERON:0002616;2.96e-26;53!UBERON:0000956;9.29e-25;25!UBERON:0000203;9.29e-25;25!UBERON:0001950;2.09e-21;20!UBERON:0000955;6.77e-20;68!UBERON:0001874;1.18e-19;1!UBERON:0002902;2.97e-19;1!UBERON:0001882;2.97e-19;1!UBERON:0002022;2.97e-19;1!UBERON:0009899;2.97e-19;1!UBERON:0007190;2.97e-19;1!UBERON:0005403;2.97e-19;1!UBERON:0001017;4.67e-13;75!UBERON:0000200;6.12e-13;6!UBERON:0001016;9.27e-12;83!UBERON:0001871;3.14e-11;6!UBERON:0001954;1.43e-10;2!UBERON:0003022;1.43e-10;2!UBERON:0002421;1.43e-10;2!UBERON:0002600;1.43e-10;2!UBERON:0002771;2.60e-10;2!UBERON:0001876;2.60e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.54e-72,4;UBERON:0002435,1.54e-72,4;UBERON:0000204,1.54e-72,4;UBERON:0010082,1.54e-72,4;UBERON:0001869,5.26e-65,32;UBERON:0001893,2.83e-61,34;UBERON:0005383,5.01e-55,3;UBERON:0005382,5.01e-55,3;UBERON:0002791,8.22e-54,32;UBERON:0002780,5.22e-51,41;UBERON:0001890,5.22e-51,41;UBERON:0003080,5.22e-51,41;UBERON:0006240,5.22e-51,41;UBERON:0003528,1.02e-50,34;UBERON:0002020,1.02e-50,34;UBERON:0002420,2.50e-50,9;UBERON:0007245,2.50e-50,9;UBERON:0010009,2.50e-50,9;UBERON:0010011,2.50e-50,9;UBERON:0000454,2.50e-50,9;UBERON:0009663,9.83e-42,7;UBERON:0000073,1.36e-39,53;UBERON:0002616,1.36e-39,53;UBERON:0001049,1.74e-37,56;UBERON:0005068,1.74e-37,56;UBERON:0006241,1.74e-37,56;UBERON:0007135,1.74e-37,56;UBERON:0001873,2.73e-37,2;UBERON:0010122,2.73e-37,2;UBERON:0003056,1.98e-34,61;UBERON:0000349,2.49e-33,5;UBERON:0000125,1.37e-32,9;UBERON:0002308,1.37e-32,9;UBERON:0000955,1.92e-30,68;UBERON:0006238,1.92e-30,68;UBERON:0002619,5.68e-28,22;UBERON:0001017,1.34e-25,81;UBERON:0003075,1.34e-25,82;UBERON:0007284,1.34e-25,82;UBERON:0000956,9.50e-25,25;UBERON:0000203,9.50e-25,25;UBERON:0002346,2.13e-24,86;UBERON:0001016,4.81e-23,89;UBERON:0001950,2.13e-21,20;UBERON:0010371,4.01e-20,104;UBERON:0001874,1.30e-19,1;UBERON:0001882,2.25e-19,1;UBERON:0005403,2.25e-19,1;UBERON:0002902,2.71e-19,1;UBERON:0009899,2.71e-19,1;UBERON:0002022,3.91e-19,1;UBERON:0007190,5.62e-19,1;UBERON:0007023,1.73e-18,114;UBERON:0010314,9.24e-16,132;UBERON:0000200,7.78e-13,6;UBERON:0004121,6.88e-12,171;UBERON:0000924,6.88e-12,171;UBERON:0006601,6.88e-12,171;UBERON:0001871,2.69e-11,6;UBERON:0000025,1.20e-10,192;UBERON:0001954,1.43e-10,2;UBERON:0003022,1.43e-10,2;UBERON:0002421,1.43e-10,2;UBERON:0002600,1.43e-10,2;UBERON:0001876,1.89e-10,2;UBERON:0002771,2.72e-10,2;UBERON:0011216,6.17e-09,223;UBERON:0004111,2.27e-08,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,0,0,1.77148277162768,2.53252521113357,0,0.110579259931225,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,0.817220436669454,0.160753148465019,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.625954653532499,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0.215649622793364,0,0.436838552768056,0,0,0,0,0,0,0,0,0,1.60573062741149,0,0.798169295285756,0.41023272848151,0.504143392443436,1.24483054435592,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01306376927592,0,0.826747186004736,1.01465296310251,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0.339848664884159,0.920818829879887,0,0,0,2.19961825882403,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834912883456661,0,0,0,0,0,0,0,0,0,0,1.77148277162768,2.53252521113357,0,0.110579259931225,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,0.817220436669454,0.160753148465019,0,0,0,0,1.21499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.625954653532499,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0.215649622793364,0,0.436838552768056,0,0,0,0,0,0,0,0,0,1.60573062741149,0,0.798169295285756,0.41023272848151,0.504143392443436,1.24483054435592,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01306376927592,0,0.826747186004736,1.01465296310251,0,0,0,0,0,0,0,0,0.682986574053893,0,0,0,0.339848664884159,0.920818829879887,0,0,0,2.19961825882403,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@SHANK2 | |short_description=p13@SHANK2 | ||
}} | }} |
Latest revision as of 23:12, 19 September 2015
Short description: | p13@SHANK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_SHANK2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -19bp_to_ENST00000409161, ENST00000409530_5end |
EntrezGene: | SHANK2 |
HGNC: | 14295 |
UniProt: | E7EUA2C9JW40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data