FFCP PHASE1:Hg19::chr10:43133725..43133784,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:43133725..43133784,+
|short_description=p@chr10:43133725..43133784,+
|description=CAGE_peak_at_chr10:43133725..43133784,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:43133725..43133784,+ | |||
|description=CAGE_peak_at_chr10:43133725..43133784,+ | |||
|id=chr10:43133725..43133784,+ | |||
|ontology_enrichment_celltype=CL:0000838!6.53e-11!52;CL:0000542!6.75e-11!53;CL:0000051!6.75e-11!53;CL:0000791!2.39e-08!18;CL:0000789!2.39e-08!18;CL:0002420!2.39e-08!18;CL:0002419!2.39e-08!18;CL:0000790!2.39e-08!18;CL:0000084!1.83e-07!25;CL:0000827!1.83e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.84e-10;18!CL:0000789;2.84e-10;18!CL:0002419;2.84e-10;18!CL:0000625;6.18e-08;11!CL:0000084;9.82e-08;25!CL:0000542;7.08e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.49e-10,18;CL:0000789,2.49e-10,18;CL:0002420,2.49e-10,18;CL:0002419,2.49e-10,18;CL:0000790,2.49e-10,18;CL:0000838,1.07e-09,52;CL:0000542,2.79e-09,53;CL:0000051,2.79e-09,53;CL:0000625,7.45e-08,11;CL:0000084,2.09e-07,25;CL:0000827,2.09e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.84e-10;18!CL:0000051;7.08e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;6.25e-16;41!UBERON:0001890;6.25e-16;41!UBERON:0001893;1.72e-15;34!UBERON:0003528;2.91e-15;34!UBERON:0002020;2.91e-15;34!UBERON:0002791;2.97e-15;32!UBERON:0001869;4.54e-15;32!UBERON:0002619;8.32e-15;22!UBERON:0000073;1.14e-13;53!UBERON:0002616;1.14e-13;53!UBERON:0001950;1.98e-13;20!UBERON:0000956;5.67e-12;25!UBERON:0000203;5.67e-12;25!UBERON:0007023;6.05e-12;114!UBERON:0000955;2.52e-08;68!UBERON:0001017;3.31e-08;75!UBERON:0002420;7.35e-08;9!UBERON:0007245;7.35e-08;9!UBERON:0010009;7.35e-08;9!UBERON:0010011;7.35e-08;9!UBERON:0000454;7.35e-08;9!UBERON:0000125;1.11e-07;9!UBERON:0002308;1.11e-07;9!UBERON:0001016;2.71e-07;83!UBERON:0000178;7.66e-07;15!UBERON:0000179;7.66e-07;15!UBERON:0000463;7.66e-07;15!UBERON:0009663;9.90e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.99e-42,114;UBERON:0001049,9.97e-26,56;UBERON:0005068,9.97e-26,56;UBERON:0006241,9.97e-26,56;UBERON:0007135,9.97e-26,56;UBERON:0000073,3.62e-24,53;UBERON:0002616,3.62e-24,53;UBERON:0002780,2.81e-22,41;UBERON:0001890,2.81e-22,41;UBERON:0003080,2.81e-22,41;UBERON:0006240,2.81e-22,41;UBERON:0001893,1.58e-18,34;UBERON:0003528,2.05e-18,34;UBERON:0002020,2.05e-18,34;UBERON:0001017,2.25e-17,81;UBERON:0002791,2.50e-17,32;UBERON:0000955,3.33e-17,68;UBERON:0006238,3.33e-17,68;UBERON:0001869,3.78e-17,32;UBERON:0003075,8.07e-17,82;UBERON:0007284,8.07e-17,82;UBERON:0001016,2.01e-16,89;UBERON:0002346,2.24e-16,86;UBERON:0003056,3.20e-15,61;UBERON:0002619,3.35e-15,22;UBERON:0001950,7.93e-14,20;UBERON:0000956,2.62e-12,25;UBERON:0000203,2.62e-12,25;UBERON:0010371,1.38e-10,104;UBERON:0002420,4.64e-08,9;UBERON:0007245,4.64e-08,9;UBERON:0010009,4.64e-08,9;UBERON:0010011,4.64e-08,9;UBERON:0000454,4.64e-08,9;UBERON:0000125,7.93e-08,9;UBERON:0002308,7.93e-08,9;UBERON:0000178,3.31e-07,15;UBERON:0000179,3.31e-07,15;UBERON:0000463,3.31e-07,15;UBERON:0011216,4.38e-07,223;UBERON:0009663,8.49e-07,7;UBERON:0010314,9.97e-07,132 | |||
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| ||
|short_description=p@chr10:43133725..43133784,+ | |||
}} | }} |
Latest revision as of 13:41, 23 July 2015
Short description: | p@chr10:43133725..43133784, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:43133725..43133784, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.49e-10 | 18 |
alpha-beta T cell | 2.49e-10 | 18 |
immature T cell | 2.49e-10 | 18 |
mature T cell | 2.49e-10 | 18 |
immature alpha-beta T cell | 2.49e-10 | 18 |
lymphoid lineage restricted progenitor cell | 1.07e-09 | 52 |
lymphocyte | 2.79e-09 | 53 |
common lymphoid progenitor | 2.79e-09 | 53 |
CD8-positive, alpha-beta T cell | 7.45e-08 | 11 |
T cell | 2.09e-07 | 25 |
pro-T cell | 2.09e-07 | 25 |