FFCP PHASE1:Hg19::chr17:202579..202625,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9501 | |EntrezGene=9501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10296 | |HGNC=10296 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000536489_5end | |association_with_transcript=0bp_to_ENST00000536489_5end | ||
|cluster_id=chr17:202579..202625,- | |||
|description=CAGE_peak_1_at_RPH3AL_5end | |description=CAGE_peak_1_at_RPH3AL_5end | ||
|id=chr17:202579..202625,- | |id=chr17:202579..202625,- | ||
|ontology_enrichment_celltype=CL:0000066!7.13e-17!254;CL:1000497!9.38e-11!18;CL:0002518!9.38e-11!18;CL:0000223!3.33e-10!59;CL:1000449!5.49e-10!16;CL:0000115!6.38e-10!35;CL:0002078!1.00e-08!44;CL:0002681!3.75e-08!13;CL:0002584!3.75e-08!13;CL:0002076!1.11e-07!43;CL:1000507!2.75e-07!12;CL:1000494!2.75e-07!12 | |ontology_enrichment_celltype=CL:0000066!7.13e-17!254;CL:1000497!9.38e-11!18;CL:0002518!9.38e-11!18;CL:0000223!3.33e-10!59;CL:1000449!5.49e-10!16;CL:0000115!6.38e-10!35;CL:0002078!1.00e-08!44;CL:0002681!3.75e-08!13;CL:0002584!3.75e-08!13;CL:0002076!1.11e-07!43;CL:1000507!2.75e-07!12;CL:1000494!2.75e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000497;1.02e-15;17!CL:0002518;1.02e-15;17!CL:1000449;9.42e-15;15!CL:0002681;3.02e-12;12!CL:0002584;3.02e-12;12!CL:0000115;7.03e-11;36!CL:1000507;6.09e-10;10!CL:1000494;6.09e-10;10!CL:1000746;4.27e-08;7!CL:1000612;4.27e-08;7!CL:0002368;7.65e-08;13!CL:0002078;2.27e-07;45!CL:0000182;2.77e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.42e-23,253;CL:1000497,8.18e-16,17;CL:0002518,8.18e-16,17;CL:1000449,8.35e-15,15;CL:0000115,1.32e-12,36;CL:0000223,1.61e-12,58;CL:0002681,2.92e-12,12;CL:0002584,2.92e-12,12;CL:0002078,1.63e-11,45;CL:1000507,5.30e-10,10;CL:1000494,5.30e-10,10;CL:0002076,2.94e-08,42;CL:1000746,4.36e-08,7;CL:1000612,4.36e-08,7;CL:0002368,7.87e-08,13;CL:0000182,2.69e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0001041;9.47e-11;30!UBERON:0003104;1.91e-10;31!UBERON:0006595;1.84e-08;86!CL:0000223;1.17e-07;58 | |||
|ontology_enrichment_disease=DOID:299!3.42e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:299;6.29e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.06e-10,106;DOID:299,5.41e-08,25;DOID:0050687,6.87e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0005177!3.83e-21!107;UBERON:0009569!3.33e-17!113;UBERON:0000466!6.40e-17!126;UBERON:0004119!4.69e-16!169;UBERON:0000925!4.69e-16!169;UBERON:0006595!4.69e-16!169;UBERON:0002417!8.43e-15!61;UBERON:0000916!8.43e-15!61;UBERON:0005172!1.42e-14!55;UBERON:0005173!1.42e-14!55;UBERON:0001007!1.02e-13!155;UBERON:0001555!1.02e-13!155;UBERON:0007026!1.02e-13!155;UBERON:0001008!1.57e-13!45;UBERON:0000481!4.08e-13!347;UBERON:0005911!4.77e-13!82;UBERON:0006554!5.55e-13!44;UBERON:0004921!2.03e-12!129;UBERON:0004185!2.03e-12!129;UBERON:0000464!3.13e-12!104;UBERON:0002113!1.29e-11!27;UBERON:0003918!1.29e-11!27;UBERON:0005095!1.29e-11!27;UBERON:0007687!1.29e-11!27;UBERON:0000489!3.17e-11!32;UBERON:0002100!5.91e-11!216;UBERON:0000080!1.40e-10!18;UBERON:0002120!1.40e-10!18;UBERON:0004875!1.40e-10!18;UBERON:0005721!1.40e-10!18;UBERON:0005754!1.40e-10!18;UBERON:0007297!1.40e-10!18;UBERON:0003887!1.48e-10!21;UBERON:0000077!2.12e-10!130;UBERON:0006555!2.55e-10!17;UBERON:0005103!2.55e-10!17;UBERON:0000083!2.55e-10!17;UBERON:0009201!2.55e-10!17;UBERON:0004819!2.55e-10!17;UBERON:0006553!2.55e-10!17;UBERON:0003074!2.55e-10!17;UBERON:0003060!2.55e-10!17;UBERON:0000058!2.63e-10!26;UBERON:0004111!4.23e-10!241;UBERON:0004876!5.37e-10!20;UBERON:0004211!5.49e-10!16;UBERON:0001285!5.49e-10!16;UBERON:0007684!5.49e-10!16;UBERON:0003220!5.49e-10!16;UBERON:0004208!5.49e-10!16;UBERON:0003104!1.13e-09!238;UBERON:0009142!1.13e-09!238;UBERON:0000468!2.63e-09!659;UBERON:0003886!1.23e-08!63;UBERON:0001041!1.24e-08!98;UBERON:0000119!1.52e-08!312;UBERON:0000483!2.64e-08!309;UBERON:0000477!3.36e-08!286;UBERON:0001225!3.75e-08!13;UBERON:0008987!3.75e-08!13;UBERON:0003064!4.26e-08!37;UBERON:0000475!7.18e-08!365;UBERON:0000025!7.71e-08!194;UBERON:0003929!1.21e-07!54;UBERON:0009497!1.54e-07!25;UBERON:0000015!1.54e-07!25;UBERON:0002423!1.54e-07!25;UBERON:0006235!1.54e-07!25;UBERON:0004161!1.54e-07!25;UBERON:0000353!1.54e-07!17;UBERON:0000922!2.03e-07!612;UBERON:0002553!2.44e-07!70;UBERON:0009773!2.75e-07!12;UBERON:0001231!2.75e-07!12;UBERON:0004810!2.75e-07!12;UBERON:0003103!4.01e-07!69;UBERON:0005409!6.17e-07!35;UBERON:0007023!7.44e-07!115;UBERON:0000467!8.02e-07!625;UBERON:0009856!9.82e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;8.69e-19;30!UBERON:0001008;8.69e-19;30!UBERON:0002113;1.91e-16;24!UBERON:0011143;1.91e-16;24!UBERON:0006555;9.42e-15;15!UBERON:0004819;9.42e-15;15!UBERON:0001285;9.42e-15;15!UBERON:0007684;9.42e-15;15!UBERON:0000489;2.11e-13;29!UBERON:0000353;9.19e-13;15!UBERON:0001225;3.02e-12;12!UBERON:0008987;3.02e-12;12!UBERON:0005172;4.14e-12;52!UBERON:0005173;4.14e-12;52!UBERON:0002417;7.42e-11;58!UBERON:0000916;7.42e-11;58!UBERON:0005177;7.66e-11;99!UBERON:0004211;6.09e-10;10!UBERON:0009773;6.09e-10;10!UBERON:0001231;6.09e-10;10!UBERON:0004810;6.09e-10;10!UBERON:0002423;2.10e-09;25!UBERON:0001851;5.79e-09;15!UBERON:0002048;3.59e-08;22!UBERON:0000117;3.59e-08;22!UBERON:0000171;3.59e-08;22!UBERON:0000170;3.59e-08;22!UBERON:0000074;4.27e-08;7!UBERON:0001229;4.27e-08;7!UBERON:0005409;4.79e-08;22!UBERON:0009569;4.97e-08;110!UBERON:0005181;9.86e-08;35!UBERON:0005178;1.30e-07;34!UBERON:0002224;1.30e-07;34!UBERON:0002368;6.18e-07;33 | |||
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| ||
|short_description=p1@RPH3AL | |short_description=p1@RPH3AL | ||
}} | }} |
Latest revision as of 01:14, 19 September 2015
Short description: | p1@RPH3AL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPH3AL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536489_5end |
EntrezGene: | RPH3AL |
HGNC: | 10296 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.42e-23 | 253 |
kidney cell | 8.18e-16 | 17 |
kidney epithelial cell | 8.18e-16 | 17 |
epithelial cell of nephron | 8.35e-15 | 15 |
endothelial cell | 1.32e-12 | 36 |
endodermal cell | 1.61e-12 | 58 |
kidney cortical cell | 2.92e-12 | 12 |
renal cortical epithelial cell | 2.92e-12 | 12 |
meso-epithelial cell | 1.63e-11 | 45 |
kidney tubule cell | 5.30e-10 | 10 |
nephron tubule epithelial cell | 5.30e-10 | 10 |
endo-epithelial cell | 2.94e-08 | 42 |
glomerular cell | 4.36e-08 | 7 |
kidney corpuscule cell | 4.36e-08 | 7 |
respiratory epithelial cell | 7.87e-08 | 13 |
hepatocyte | 2.69e-07 | 12 |
Ontology term | p-value | n |
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