FFCP PHASE1:Hg19::chr10:75336238..75336253,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:75336238..75336253,-
|short_description=p4@USP54
|description=CAGE_peak_4_at_USP54_5end
|association_with_transcript=-143bp_to_ENST00000498143,uc001jup.2_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=159195 | |EntrezGene=159195 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23513 | |HGNC=23513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-143bp_to_ENST00000498143,uc001jup.2_5end | |||
|cluster_id=chr10:75336238..75336253,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_USP54_5end | |||
|id=chr10:75336238..75336253,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.41e-12;82!UBERON:0006241;9.74e-07;3!UBERON:0003057;9.74e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.59e-23!94;UBERON:0001016!6.59e-23!94;UBERON:0005743!2.23e-21!86;UBERON:0001017!6.29e-21!82;UBERON:0007023!1.29e-18!115;UBERON:0001049!7.80e-17!57;UBERON:0005068!7.80e-17!57;UBERON:0006241!7.80e-17!57;UBERON:0007135!7.80e-17!57;UBERON:0000955!1.35e-16!69;UBERON:0006238!1.35e-16!69;UBERON:0002616!5.74e-16!59;UBERON:0004121!1.12e-15!169;UBERON:0000924!1.42e-15!173;UBERON:0006601!1.42e-15!173;UBERON:0003075!5.27e-15!86;UBERON:0007284!5.27e-15!86;UBERON:0002346!1.17e-14!90;UBERON:0001893!1.63e-13!34;UBERON:0002780!1.98e-13!41;UBERON:0001890!1.98e-13!41;UBERON:0006240!1.98e-13!41;UBERON:0002020!2.10e-13!34;UBERON:0003528!2.10e-13!34;UBERON:0000153!7.36e-13!129;UBERON:0007811!7.36e-13!129;UBERON:0002791!7.42e-13!33;UBERON:0003080!1.07e-12!42;UBERON:0000033!1.84e-12!123;UBERON:0001869!3.68e-12!32;UBERON:0002619!4.34e-11!22;UBERON:0003056!1.80e-10!61;UBERON:0001950!6.49e-10!20;UBERON:0000956!1.54e-08!25;UBERON:0000203!1.54e-08!25;UBERON:0002308!9.55e-07!9;UBERON:0000125!9.55e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.23e-24;34!UBERON:0002780;4.76e-24;41!UBERON:0001890;4.76e-24;41!UBERON:0003528;9.82e-24;34!UBERON:0002020;9.82e-24;34!UBERON:0002791;2.05e-23;32!UBERON:0001869;5.43e-23;32!UBERON:0002619;4.16e-22;22!UBERON:0000073;1.40e-21;53!UBERON:0002616;1.40e-21;53!UBERON:0001950;2.53e-19;20!UBERON:0000956;6.36e-19;25!UBERON:0000203;6.36e-19;25!UBERON:0001017;6.64e-16;75!UBERON:0001016;1.06e-14;83!UBERON:0000955;8.13e-14;68!UBERON:0000125;2.63e-12;9!UBERON:0002308;2.63e-12;9!UBERON:0002298;1.32e-11;6!UBERON:0002021;8.25e-10;5!UBERON:0009663;3.92e-09;7!UBERON:0002420;4.11e-09;9!UBERON:0007245;4.11e-09;9!UBERON:0010009;4.11e-09;9!UBERON:0010011;4.11e-09;9!UBERON:0000454;4.11e-09;9!UBERON:0004732;1.26e-08;13!UBERON:0007023;6.68e-08;114!UBERON:0011216;2.88e-07;132!UBERON:0000369;3.10e-07;4!UBERON:0002435;3.10e-07;4!UBERON:0000204;3.10e-07;4!UBERON:0004733;3.82e-07;12!UBERON:0002028;3.82e-07;12!UBERON:0000988;8.45e-07;3!UBERON:0002240;9.74e-07;3!UBERON:0005174;9.74e-07;3!UBERON:0001137;9.74e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.73e-43,56;UBERON:0005068,6.73e-43,56;UBERON:0006241,6.73e-43,56;UBERON:0007135,6.73e-43,56;UBERON:0001017,1.15e-42,81;UBERON:0001016,1.13e-40,89;UBERON:0000073,2.91e-38,53;UBERON:0002616,2.91e-38,53;UBERON:0000955,7.00e-36,68;UBERON:0006238,7.00e-36,68;UBERON:0002780,1.65e-32,41;UBERON:0001890,1.65e-32,41;UBERON:0003080,1.65e-32,41;UBERON:0006240,1.65e-32,41;UBERON:0003075,7.07e-32,82;UBERON:0007284,7.07e-32,82;UBERON:0002346,3.08e-31,86;UBERON:0001893,8.97e-30,34;UBERON:0003528,1.67e-29,34;UBERON:0002020,1.67e-29,34;UBERON:0002791,2.00e-26,32;UBERON:0001869,2.12e-26,32;UBERON:0003056,2.16e-25,61;UBERON:0010371,4.97e-25,104;UBERON:0007023,8.56e-24,114;UBERON:0002619,4.43e-22,22;UBERON:0004121,2.14e-21,171;UBERON:0000924,2.14e-21,171;UBERON:0006601,2.14e-21,171;UBERON:0001950,3.41e-19,20;UBERON:0000956,6.70e-19,25;UBERON:0000203,6.70e-19,25;UBERON:0010314,6.45e-18,132;UBERON:0011216,2.81e-16,223;UBERON:0000125,1.52e-12,9;UBERON:0002308,1.52e-12,9;UBERON:0002298,1.35e-11,6;UBERON:0003076,2.78e-11,15;UBERON:0003057,2.78e-11,15;UBERON:0002021,1.64e-09,5;UBERON:0002420,1.91e-09,9;UBERON:0007245,1.91e-09,9;UBERON:0010009,1.91e-09,9;UBERON:0010011,1.91e-09,9;UBERON:0000454,1.91e-09,9;UBERON:0009663,2.72e-09,7;UBERON:0004732,1.31e-08,13;UBERON:0000025,4.13e-08,192;UBERON:0000369,2.14e-07,4;UBERON:0002435,2.14e-07,4;UBERON:0000204,2.14e-07,4;UBERON:0010082,2.14e-07,4;UBERON:0004733,3.94e-07,12;UBERON:0002028,3.94e-07,12;UBERON:0007277,3.94e-07,12;UBERON:0000988,6.83e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,0,0,0,0.247532705920093,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0,0,0.152826811495903,0.328402357799783,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0.426507697462265,0.293600439334847,0,0,0.434021741431704,0.223915474239924,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0.263384084775077,0,0,0,0,0,0,0,0,0.589211814949674,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0.567208902984407,0.221729397462564,0.175669571386252,2.03017567021455,0,0.370784442784429,0,0,0.132957960518865,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0.66944122552934,0.805658634218294,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,1.14734648299525,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0.741800787835671,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.412210116953756,0,0,0.168776332241266,0.0974370051611986,0.504867548488229,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,0,0,0,0.853815942907168,1.59035721985782,0.232387885739037,0.518305275076852,1.00928340350251,1.82488679537915,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0.329250856225877,0,0,0,0,0,0,0.811512834825538,0.352226082707465,0.577465791044295,0.462985512576611,0.951270761172991,0,0,0.738651018262192,0,0,0,0.16798212819886,0.425325291727159,0.179117045405697,0.290633938513962,0,0,0,0.621984346622316,0.288239906833923,0.6312121671319,0.952468414382536,0.763976851116555,0,0,0.205654985406647,0.901029173531752,1.14330573052231,0.112131084345361,0,0.22001485746285,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,3.91871190177462,1.74306691720059,3.09916272664377,0,0.502257091432126,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0,0.537182889719687,0.224170287987055,0,0,0.128343036279748,1.01637849688985,2.60279707715243,0,0.335032530668698,1.27587750330633,0,0,0,0.36807447515742,0,0,0.831883446123229,0.713715955188647,0,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.215714200818617,0,0.606255142892519,0,0,0,0.153461973288062,0.280660094433074,0,0,0.321707842287215,0,0,0,0.164254312027618,0,0,0.604297247958111,0,0.184161977871793,0.114814448164607,0,0,0.451199612907412,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.650756789328606,0,0.0915694648183434,0.082509499920588,0.574265537996172,0,0,1.16004861950546,0,0,0.137836572484531,0,0,0.0852266274161009,0.356128142586949,0.330569830721956,0,0.255225424989168,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,1.2655176988749,0.38126038784765,0,0.855877976067841,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0.196498082026242,0,0.354761064070598,0,0.658589785919804,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.28853842595289,0.142283686696828,0.318852545457645,0.399158742865633,0.191505370132367,0.423347165447766,0,1.68478306868075,0,0.156679895773023,2.50634477090067,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0.33307196799782,0,0,0.439524537815682,0.242721043499027,0,0.568272293612826,0.95497793895076,0.890894042497916,0.921482106297696,0,1.96937182974718,0.445234820091624,0.16480387422676,0.844501632511974,0.398495976502139,0.828851746593443,0.503865495708552,0.715880777515084,0.123084805461069,0,0.449341755736634,1.07412704805365,0,0.295930216910801,0,0,1.93866549219044,5.93715828235848,0,0.520855522170466,1.48681999993533,0,0.1137934482855,0.508507300585533,0,0,0.291604613383254,0.173624994933292,1.77148277162768,1.32656082487949,0,0.110579259931225,2.36438095162838,1.09692698576986,0.32681539055697,3.06732237412927,0.461701551022782,1.70913083770502,0.23056390438806,0.269272933229316,0.325942115766024,0,0.183195186803725,0,0,0.156980256395025,0,0,0.19606253431774,0.167821586975843,0,0,0.210998064528027,0.326465616318295,0.989471500037586,0,0,0.265372693510018,0,0.593042257361244,0,0.104421949505455,14.0868367929615,0,4.2167600230561,0.547364367646998,1.36965233252463,3.15614493394321,0,1.20990716048664,0.61214552326098,1.83241080922615,0.300646838828985,0.311064574191741,0.664653872707185,0.992975867626496,0.941798755221676,1.19472429772959,0.569219092059585,0.277349346026277,0.520679215005393,0.195984794828755,0.3482368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| ||
|short_description=p4@USP54 | |||
}} | }} |
Latest revision as of 07:18, 19 September 2015
Short description: | p4@USP54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_USP54_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -143bp_to_ENST00000498143, uc001jup.2_5end |
EntrezGene: | USP54 |
HGNC: | 23513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data