FFCP PHASE1:Hg19::chr18:53069389..53069416,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_uc010xdv.1_5end | |association_with_transcript=20bp_to_uc010xdv.1_5end | ||
|cluster_id=chr18:53069389..53069416,- | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_40_at_TCF4_5end | |description=CAGE_peak_40_at_TCF4_5end | ||
|id=chr18:53069389..53069416,- | |id=chr18:53069389..53069416,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.08e-13;6!CL:0000404;4.08e-13;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.89e-17,8;CL:0000540,4.09e-13,6;CL:0000031,4.09e-13,6;CL:0000404,4.09e-13,6 | |||
|ontology_enrichment_development_v019=CL:0000031;4.08e-13;6!UBERON:0005425;3.39e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!7.94e-42!86;UBERON:0001017!9.58e-42!82;UBERON:0000073!1.34e-40!94;UBERON:0001016!1.34e-40!94;UBERON:0001049!4.78e-37!57;UBERON:0005068!4.78e-37!57;UBERON:0006241!4.78e-37!57;UBERON:0007135!4.78e-37!57;UBERON:0000955!2.63e-35!69;UBERON:0006238!2.63e-35!69;UBERON:0002616!2.67e-33!59;UBERON:0002780!4.77e-31!41;UBERON:0001890!4.77e-31!41;UBERON:0006240!4.77e-31!41;UBERON:0001893!6.97e-31!34;UBERON:0002020!2.26e-30!34;UBERON:0003528!2.26e-30!34;UBERON:0003080!5.09e-30!42;UBERON:0002791!1.37e-29!33;UBERON:0001869!5.87e-29!32;UBERON:0003075!6.06e-27!86;UBERON:0007284!6.06e-27!86;UBERON:0002346!1.91e-26!90;UBERON:0007023!1.36e-24!115;UBERON:0000956!4.07e-24!25;UBERON:0000203!4.07e-24!25;UBERON:0003056!1.81e-21!61;UBERON:0002619!2.96e-21!22;UBERON:0000033!1.12e-19!123;UBERON:0000153!1.79e-19!129;UBERON:0007811!1.79e-19!129;UBERON:0001950!6.65e-19!20;UBERON:0000924!6.19e-17!173;UBERON:0006601!6.19e-17!173;UBERON:0004121!6.60e-17!169;UBERON:0000025!1.58e-14!194;UBERON:0004111!8.31e-13!241;UBERON:0000477!2.23e-11!286;UBERON:0000475!1.06e-10!365;UBERON:0000483!1.59e-10!309;UBERON:0000119!3.39e-10!312;UBERON:0000468!6.55e-10!659;UBERON:0000064!8.03e-09!219;UBERON:0000200!1.25e-08!6;UBERON:0004732!1.71e-08!13;UBERON:0003076!3.02e-08!15;UBERON:0003057!3.02e-08!15;UBERON:0000467!6.49e-08!625;UBERON:0000480!7.67e-08!626;UBERON:0001872!8.39e-08!5;UBERON:0002308!1.01e-07!9;UBERON:0000125!1.01e-07!9;UBERON:0004733!2.22e-07!12;UBERON:0002028!2.22e-07!12;UBERON:0007277!2.22e-07!12;UBERON:0002050!7.74e-07!605;UBERON:0005423!7.74e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.08e-18;20!UBERON:0001869;8.47e-17;32!UBERON:0002619;2.94e-16;22!UBERON:0001872;5.90e-15;5!UBERON:0001893;1.36e-14;34!UBERON:0000956;2.69e-14;25!UBERON:0000203;2.69e-14;25!UBERON:0003528;2.96e-13;34!UBERON:0002020;2.96e-13;34!UBERON:0002791;3.71e-13;32!UBERON:0001016;1.91e-11;83!UBERON:0002780;7.72e-11;41!UBERON:0001890;7.72e-11;41!UBERON:0001882;3.39e-09;1!UBERON:0002022;3.39e-09;1!UBERON:0000941;3.39e-09;1!UBERON:0001785;3.39e-09;1!UBERON:0002464;3.39e-09;1!UBERON:0004904;3.39e-09;1!UBERON:0001021;3.39e-09;1!UBERON:0007190;3.39e-09;1!UBERON:0005403;3.39e-09;1!UBERON:0000073;6.10e-09;53!UBERON:0002616;6.10e-09;53!UBERON:0001017;1.16e-07;75!UBERON:0000955;1.29e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.40e-25,89;UBERON:0001017,6.48e-22,81;UBERON:0001869,3.47e-18,32;UBERON:0001950,6.74e-18,20;UBERON:0001893,4.50e-17,34;UBERON:0002619,2.81e-16,22;UBERON:0001872,4.65e-15,5;UBERON:0002791,2.28e-14,32;UBERON:0000956,2.58e-14,25;UBERON:0000203,2.58e-14,25;UBERON:0000955,2.82e-14,68;UBERON:0006238,2.82e-14,68;UBERON:0002780,5.19e-14,41;UBERON:0001890,5.19e-14,41;UBERON:0003080,5.19e-14,41;UBERON:0006240,5.19e-14,41;UBERON:0003528,1.73e-13,34;UBERON:0002020,1.73e-13,34;UBERON:0004121,2.45e-13,171;UBERON:0000924,2.45e-13,171;UBERON:0006601,2.45e-13,171;UBERON:0000073,3.94e-13,53;UBERON:0002616,3.94e-13,53;UBERON:0001049,2.34e-12,56;UBERON:0005068,2.34e-12,56;UBERON:0006241,2.34e-12,56;UBERON:0007135,2.34e-12,56;UBERON:0003056,3.22e-11,61;UBERON:0002346,4.34e-11,86;UBERON:0011216,1.08e-10,223;UBERON:0003075,9.76e-10,82;UBERON:0007284,9.76e-10,82;UBERON:0007190,2.16e-09,1;UBERON:0000941,3.25e-09,1;UBERON:0001785,3.25e-09,1;UBERON:0002464,3.25e-09,1;UBERON:0004904,3.25e-09,1;UBERON:0001021,3.25e-09,1;UBERON:0003902,3.25e-09,1;UBERON:0005425,3.25e-09,1;UBERON:0002022,3.83e-09,1;UBERON:0001882,5.28e-09,1;UBERON:0005403,5.28e-09,1;UBERON:0010371,2.56e-07,104 | |||
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| ||
|short_description=p40@TCF4 | |short_description=p40@TCF4 | ||
}} | }} |
Latest revision as of 20:58, 19 September 2015
Short description: | p40@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_TCF4_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 20bp_to_uc010xdv.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.89e-17 | 8 |
neuron | 4.09e-13 | 6 |
neuroblast | 4.09e-13 | 6 |
electrically signaling cell | 4.09e-13 | 6 |