FFCP PHASE1:Hg19::chr3:16553385..16553420,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:16553385..16553420,- | |||
|coexpression_cluster_id=C1919 | |||
|description=CAGE_peak_at_chr3:16553385..16553420,- | |description=CAGE_peak_at_chr3:16553385..16553420,- | ||
|id=chr3:16553385..16553420,- | |id=chr3:16553385..16553420,- | ||
|ontology_enrichment_celltype=CL:0000738!1.36e-57!140;CL:0002031!1.16e-46!124;CL:0002087!4.99e-46!119;CL:0000988!1.43e-45!182;CL:0000037!7.09e-45!172;CL:0000566!7.09e-45!172;CL:0002032!3.55e-40!165;CL:0000837!3.55e-40!165;CL:0000838!4.14e-31!52;CL:0000542!2.71e-30!53;CL:0000051!2.71e-30!53;CL:0002057!3.87e-22!42;CL:0000860!4.54e-20!45;CL:0000945!1.63e-18!24;CL:0000826!1.63e-18!24;CL:0000134!1.90e-18!358;CL:0002320!1.38e-17!365;CL:0000557!3.70e-17!71;CL:0000766!2.05e-16!76;CL:0002009!8.19e-16!65;CL:0000839!7.44e-15!70;CL:0000219!1.42e-14!390;CL:0002194!7.05e-14!63;CL:0000576!7.05e-14!63;CL:0000040!7.05e-14!63;CL:0000559!7.05e-14!63;CL:0000763!8.29e-14!112;CL:0000049!8.29e-14!112;CL:0000034!1.42e-12!444;CL:0000048!4.82e-12!430;CL:0000451!7.86e-12!10;CL:0000723!1.58e-11!436;CL:0000236!1.91e-11!14;CL:0000624!6.58e-11!6;CL:0000080!2.70e-10!6;CL:0000084!2.88e-10!25;CL:0000827!2.88e-10!25;CL:0000453!2.76e-09!5;CL:0000990!7.65e-09!8;CL:0002393!2.79e-08!9;CL:0002397!2.79e-08!9;CL:0000791!5.39e-08!18;CL:0000789!5.39e-08!18;CL:0002420!5.39e-08!18;CL:0002419!5.39e-08!18;CL:0000790!5.39e-08!18 | |ontology_enrichment_celltype=CL:0000738!1.36e-57!140;CL:0002031!1.16e-46!124;CL:0002087!4.99e-46!119;CL:0000988!1.43e-45!182;CL:0000037!7.09e-45!172;CL:0000566!7.09e-45!172;CL:0002032!3.55e-40!165;CL:0000837!3.55e-40!165;CL:0000838!4.14e-31!52;CL:0000542!2.71e-30!53;CL:0000051!2.71e-30!53;CL:0002057!3.87e-22!42;CL:0000860!4.54e-20!45;CL:0000945!1.63e-18!24;CL:0000826!1.63e-18!24;CL:0000134!1.90e-18!358;CL:0002320!1.38e-17!365;CL:0000557!3.70e-17!71;CL:0000766!2.05e-16!76;CL:0002009!8.19e-16!65;CL:0000839!7.44e-15!70;CL:0000219!1.42e-14!390;CL:0002194!7.05e-14!63;CL:0000576!7.05e-14!63;CL:0000040!7.05e-14!63;CL:0000559!7.05e-14!63;CL:0000763!8.29e-14!112;CL:0000049!8.29e-14!112;CL:0000034!1.42e-12!444;CL:0000048!4.82e-12!430;CL:0000451!7.86e-12!10;CL:0000723!1.58e-11!436;CL:0000236!1.91e-11!14;CL:0000624!6.58e-11!6;CL:0000080!2.70e-10!6;CL:0000084!2.88e-10!25;CL:0000827!2.88e-10!25;CL:0000453!2.76e-09!5;CL:0000990!7.65e-09!8;CL:0002393!2.79e-08!9;CL:0002397!2.79e-08!9;CL:0000791!5.39e-08!18;CL:0000789!5.39e-08!18;CL:0002420!5.39e-08!18;CL:0002419!5.39e-08!18;CL:0000790!5.39e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.99e-20;6!CL:0000451;2.85e-19;10!CL:0000453;4.40e-17;5!CL:0000542;1.79e-16;53!CL:0000084;1.56e-14;25!CL:0000791;5.69e-14;18!CL:0000789;5.69e-14;18!CL:0002419;5.69e-14;18!CL:0000990;2.04e-13;8!CL:0000623;7.61e-12;3!CL:0000784;1.05e-11;3!CL:0000898;1.25e-11;3!CL:0002087;2.17e-11;104!CL:0000738;1.87e-10;136!CL:0000767;7.63e-10;3!CL:0000945;4.21e-09;24!CL:0000815;2.25e-08;2!CL:0000792;2.25e-08;2!CL:0002677;2.25e-08;2!CL:0001014;4.54e-08;2!CL:0001016;4.54e-08;2!CL:0000988;9.80e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.16e-46,136;CL:0000988,1.82e-38,177;CL:0000037,2.47e-35,168;CL:0002031,3.87e-33,120;CL:0002032,1.06e-31,161;CL:0000837,1.06e-31,161;CL:0002087,6.70e-31,115;CL:0000838,1.99e-28,52;CL:0000542,8.93e-28,53;CL:0000051,8.93e-28,53;CL:0000624,1.60e-20,6;CL:0000451,2.47e-19,10;CL:0000453,3.15e-17,5;CL:0000084,1.44e-14,25;CL:0000827,1.44e-14,25;CL:0000791,5.02e-14,18;CL:0000789,5.02e-14,18;CL:0002420,5.02e-14,18;CL:0002419,5.02e-14,18;CL:0000790,5.02e-14,18;CL:0000990,1.64e-13,8;CL:0000623,7.36e-12,3;CL:0000825,7.36e-12,3;CL:0000784,1.21e-11,3;CL:0000898,1.29e-11,3;CL:0000134,5.93e-11,354;CL:0002320,1.58e-10,361;CL:0000767,5.37e-10,3;CL:0000763,2.06e-09,108;CL:0000049,2.06e-09,108;CL:0000766,3.90e-09,72;CL:0000945,4.50e-09,24;CL:0000826,4.50e-09,24;CL:0000860,4.75e-09,42;CL:0002057,4.75e-09,42;CL:0000219,4.85e-09,386;CL:0000557,5.23e-09,67;CL:0002009,6.56e-09,61;CL:0000815,2.25e-08,2;CL:0000792,2.25e-08,2;CL:0002677,2.25e-08,2;CL:0001014,4.39e-08,2;CL:0001016,4.39e-08,2;CL:0000034,7.79e-08,441;CL:0000473,1.33e-07,48;CL:0000234,1.33e-07,48;CL:0000048,3.09e-07,427;CL:0000723,5.46e-07,433;CL:0000839,9.35e-07,66;CL:0002194,9.65e-07,59;CL:0000576,9.65e-07,59;CL:0000040,9.65e-07,59;CL:0000559,9.65e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000051;1.79e-16;53!CL:0000790;5.69e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.51e-18!102;UBERON:0003061!2.51e-18!102;UBERON:0002384!2.05e-16!375;UBERON:0002193!2.28e-16!112;UBERON:0002371!4.27e-14!80;UBERON:0001474!1.97e-12!86;UBERON:0002405!1.64e-11!115;UBERON:0004765!3.33e-09!101;UBERON:0001434!3.33e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.65e-10,98;UBERON:0003061,5.65e-10,98;UBERON:0002384,5.95e-10,371;UBERON:0002193,1.32e-08,108;UBERON:0002371,1.55e-07,76;UBERON:0001474,9.70e-07,82 | |||
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|short_description=p@chr3:16553385..16553420,- | |short_description=p@chr3:16553385..16553420,- | ||
}} | }} |
Latest revision as of 17:55, 29 July 2015
Short description: | p@chr3:16553385..16553420, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:16553385..16553420, - |
Coexpression cluster: | C1919_immature_CD4_Dendritic_Peripheral_Natural_migratory_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.65e-10 | 98 |
blood island | 5.65e-10 | 98 |
connective tissue | 5.95e-10 | 371 |
hemolymphoid system | 1.32e-08 | 108 |
bone marrow | 1.55e-07 | 76 |
bone element | 9.70e-07 | 82 |