FFCP PHASE1:Hg19::chr4:118954513..118954541,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9348 | |EntrezGene=9348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7682 | |HGNC=7682 | ||
|TSSclassifier=strong | |||
|UniProt=O95803 | |UniProt=O95803 | ||
|association_with_transcript=-231bp_to_ENST00000394488,uc003ibw.2_5end | |association_with_transcript=-231bp_to_ENST00000394488,uc003ibw.2_5end | ||
|cluster_id=chr4:118954513..118954541,+ | |||
|description=CAGE_peak_2_at_NDST3_5end | |description=CAGE_peak_2_at_NDST3_5end | ||
|id=chr4:118954513..118954541,+ | |id=chr4:118954513..118954541,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.29e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.29e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.34e-43!94;UBERON:0001016!4.34e-43!94;UBERON:0005743!4.60e-43!86;UBERON:0001017!3.28e-41!82;UBERON:0001049!2.04e-38!57;UBERON:0005068!2.04e-38!57;UBERON:0006241!2.04e-38!57;UBERON:0007135!2.04e-38!57;UBERON:0002346!3.01e-38!90;UBERON:0000955!2.44e-36!69;UBERON:0006238!2.44e-36!69;UBERON:0002616!2.71e-36!59;UBERON:0003075!2.81e-36!86;UBERON:0007284!2.81e-36!86;UBERON:0000924!2.78e-34!173;UBERON:0006601!2.78e-34!173;UBERON:0001893!9.24e-34!34;UBERON:0002020!3.84e-33!34;UBERON:0003528!3.84e-33!34;UBERON:0004121!2.04e-32!169;UBERON:0002791!2.33e-32!33;UBERON:0001869!4.01e-32!32;UBERON:0002780!5.54e-32!41;UBERON:0001890!5.54e-32!41;UBERON:0006240!5.54e-32!41;UBERON:0003080!6.04e-31!42;UBERON:0003056!1.72e-30!61;UBERON:0000153!6.59e-29!129;UBERON:0007811!6.59e-29!129;UBERON:0000033!9.42e-29!123;UBERON:0002619!1.47e-28!22;UBERON:0001950!2.39e-26!20;UBERON:0000956!2.74e-26!25;UBERON:0000203!2.74e-26!25;UBERON:0007023!1.02e-17!115;UBERON:0000064!1.79e-14!219;UBERON:0000200!7.06e-10!6;UBERON:0004733!2.12e-09!12;UBERON:0002028!2.12e-09!12;UBERON:0007277!2.12e-09!12;UBERON:0000025!2.62e-09!194;UBERON:0001871!3.34e-09!7;UBERON:0002420!3.61e-09!9;UBERON:0007245!3.61e-09!9;UBERON:0010009!3.61e-09!9;UBERON:0010011!3.61e-09!9;UBERON:0000454!3.61e-09!9;UBERON:0003076!1.21e-08!15;UBERON:0003057!1.21e-08!15;UBERON:0000477!1.27e-08!286;UBERON:0004732!1.74e-08!13;UBERON:0002308!2.64e-08!9;UBERON:0000125!2.64e-08!9;UBERON:0000475!2.74e-08!365;UBERON:0001872!3.11e-08!5;UBERON:0000119!3.22e-08!312;UBERON:0000483!4.02e-08!309;UBERON:0002021!4.98e-08!5;UBERON:0000349!7.49e-08!5;UBERON:0004111!1.09e-07!241;UBERON:0002298!3.59e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.99e-49;20!UBERON:0002619;3.38e-44;22!UBERON:0001869;4.32e-44;32!UBERON:0002791;3.53e-41;32!UBERON:0001893;5.30e-40;34!UBERON:0000956;1.36e-38;25!UBERON:0000203;1.36e-38;25!UBERON:0003528;1.19e-37;34!UBERON:0002020;1.19e-37;34!UBERON:0002780;1.03e-26;41!UBERON:0001890;1.03e-26;41!UBERON:0000200;6.73e-23;6!UBERON:0000073;9.15e-22;53!UBERON:0002616;9.15e-22;53!UBERON:0000955;1.65e-16;68!UBERON:0001017;3.06e-16;75!UBERON:0002420;4.93e-14;9!UBERON:0007245;4.93e-14;9!UBERON:0010009;4.93e-14;9!UBERON:0010011;4.93e-14;9!UBERON:0000454;4.93e-14;9!UBERON:0001016;3.42e-13;83!UBERON:0001871;4.93e-13;6!UBERON:0001872;8.11e-13;5!UBERON:0001870;1.39e-12;3!UBERON:0002021;1.48e-12;5!UBERON:0000369;5.89e-09;4!UBERON:0002435;5.89e-09;4!UBERON:0000204;5.89e-09;4!UBERON:0002702;8.71e-09;2!UBERON:0009663;1.36e-08;7!UBERON:0002771;1.97e-08;2!UBERON:0001876;4.35e-08;2!UBERON:0000349;3.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.81e-51,32;UBERON:0001950,1.89e-49,20;UBERON:0001893,1.19e-47,34;UBERON:0002791,5.13e-46,32;UBERON:0002619,9.12e-45,22;UBERON:0003528,4.53e-43,34;UBERON:0002020,4.53e-43,34;UBERON:0000956,4.31e-39,25;UBERON:0000203,4.31e-39,25;UBERON:0001017,5.26e-39,81;UBERON:0002780,9.66e-39,41;UBERON:0001890,9.66e-39,41;UBERON:0003080,9.66e-39,41;UBERON:0006240,9.66e-39,41;UBERON:0000073,9.23e-38,53;UBERON:0002616,9.23e-38,53;UBERON:0001016,9.29e-37,89;UBERON:0001049,1.98e-35,56;UBERON:0005068,1.98e-35,56;UBERON:0006241,1.98e-35,56;UBERON:0007135,1.98e-35,56;UBERON:0000955,8.39e-33,68;UBERON:0006238,8.39e-33,68;UBERON:0003056,3.02e-29,61;UBERON:0002346,5.37e-27,86;UBERON:0003075,2.40e-26,82;UBERON:0007284,2.40e-26,82;UBERON:0004121,1.31e-23,171;UBERON:0000924,1.31e-23,171;UBERON:0006601,1.31e-23,171;UBERON:0000200,4.10e-23,6;UBERON:0010371,4.84e-21,104;UBERON:0007023,2.45e-17,114;UBERON:0010314,3.12e-15,132;UBERON:0011216,4.90e-15,223;UBERON:0002420,3.28e-14,9;UBERON:0007245,3.28e-14,9;UBERON:0010009,3.28e-14,9;UBERON:0010011,3.28e-14,9;UBERON:0000454,3.28e-14,9;UBERON:0001871,1.93e-13,6;UBERON:0001872,7.58e-13,5;UBERON:0001870,1.03e-12,3;UBERON:0002021,1.42e-12,5;UBERON:0002702,6.43e-09,2;UBERON:0000369,6.78e-09,4;UBERON:0002435,6.78e-09,4;UBERON:0000204,6.78e-09,4;UBERON:0010082,6.78e-09,4;UBERON:0002771,1.33e-08,2;UBERON:0001876,1.55e-08,2;UBERON:0009663,1.69e-08,7;UBERON:0000025,1.79e-08,192;UBERON:0000349,1.62e-07,5;UBERON:0004111,8.94e-07,240 | |||
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|short_description=p2@NDST3 | |short_description=p2@NDST3 | ||
}} | }} |
Latest revision as of 21:00, 24 September 2015
Short description: | p2@NDST3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDST3_5end |
Coexpression cluster: | NA |
Association with transcript: | -231bp_to_ENST00000394488, uc003ibw.2_5end |
EntrezGene: | NDST3 |
HGNC: | 7682 |
UniProt: | O95803 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.29e-07 | 8 |