FFCP PHASE1:Hg19::chr12:51818586..51818663,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:51818586..51818663,+
|short_description=p1@SLC4A8
|description=CAGE_peak_1_at_SLC4A8_5end
|association_with_transcript=0bp_to_ENST00000394856,ENST00000548...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9498 | |EntrezGene=9498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11034 | |HGNC=11034 | ||
|TSSclassifier=strong | |||
|UniProt=E7EML0,Q2Y0W8 | |UniProt=E7EML0,Q2Y0W8 | ||
|association_with_transcript=0bp_to_ENST00000394856,ENST00000548811,NM_001039960,NM_004858,uc001ryq.3,uc001ryr.2,uc001rys.1_5end | |||
|cluster_id=chr12:51818586..51818663,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SLC4A8_5end | |||
|id=chr12:51818586..51818663,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.68e-11!180;CL:0002319!1.15e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.69e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.77e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.06e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.78e-39!94;UBERON:0001016!2.78e-39!94;UBERON:0005743!6.85e-38!86;UBERON:0001017!4.08e-36!82;UBERON:0001049!2.81e-34!57;UBERON:0005068!2.81e-34!57;UBERON:0006241!2.81e-34!57;UBERON:0007135!2.81e-34!57;UBERON:0003075!2.87e-33!86;UBERON:0007284!2.87e-33!86;UBERON:0002346!5.17e-32!90;UBERON:0000955!3.19e-29!69;UBERON:0006238!3.19e-29!69;UBERON:0002616!4.59e-29!59;UBERON:0002780!4.73e-27!41;UBERON:0001890!4.73e-27!41;UBERON:0006240!4.73e-27!41;UBERON:0003080!1.25e-25!42;UBERON:0003056!1.54e-25!61;UBERON:0002020!1.65e-22!34;UBERON:0003528!1.65e-22!34;UBERON:0001893!1.66e-22!34;UBERON:0002791!8.21e-22!33;UBERON:0001869!1.72e-21!32;UBERON:0000033!8.66e-21!123;UBERON:0000153!2.87e-20!129;UBERON:0007811!2.87e-20!129;UBERON:0004121!8.20e-20!169;UBERON:0000924!1.74e-19!173;UBERON:0006601!1.74e-19!173;UBERON:0000956!2.86e-17!25;UBERON:0000203!2.86e-17!25;UBERON:0002619!8.04e-16!22;UBERON:0001950!1.28e-14!20;UBERON:0000475!4.03e-11!365;UBERON:0007023!6.81e-11!115;UBERON:0000025!3.87e-10!194;UBERON:0003076!1.15e-09!15;UBERON:0003057!1.15e-09!15;UBERON:0000119!3.03e-09!312;UBERON:0000483!3.39e-09!309;UBERON:0004732!1.26e-08!13;UBERON:0004733!4.44e-08!12;UBERON:0002028!4.44e-08!12;UBERON:0007277!4.44e-08!12;UBERON:0000064!2.45e-07!219;UBERON:0000481!5.77e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.79e-24;32!UBERON:0001893;5.84e-24;34!UBERON:0003528;6.28e-24;34!UBERON:0002020;6.28e-24;34!UBERON:0002780;6.30e-24;41!UBERON:0001890;6.30e-24;41!UBERON:0002791;8.45e-24;32!UBERON:0000073;1.04e-23;53!UBERON:0002616;1.04e-23;53!UBERON:0000956;3.80e-21;25!UBERON:0000203;3.80e-21;25!UBERON:0002619;2.47e-19;22!UBERON:0001950;7.70e-18;20!UBERON:0000955;5.54e-16;68!UBERON:0001016;3.65e-15;83!UBERON:0001017;1.23e-14;75!UBERON:0004732;2.14e-10;13!UBERON:0004733;1.02e-09;12!UBERON:0002028;1.02e-09;12!UBERON:0000125;5.81e-08;9!UBERON:0002308;5.81e-08;9!UBERON:0002420;6.23e-08;9!UBERON:0007245;6.23e-08;9!UBERON:0010009;6.23e-08;9!UBERON:0010011;6.23e-08;9!UBERON:0000454;6.23e-08;9!UBERON:0002680;1.42e-07;9!UBERON:0001895;1.42e-07;9!UBERON:0001894;4.80e-07;7 | |||
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| ||
|short_description=p1@SLC4A8 | |||
}} | }} |
Latest revision as of 20:20, 18 September 2015
Short description: | p1@SLC4A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC4A8_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000394856, ENST00000548811, NM_001039960, NM_004858, uc001ryq.3, uc001ryr.2, uc001rys.1_5end |
EntrezGene: | SLC4A8 |
HGNC: | 11034 |
UniProt: | E7EML0Q2Y0W8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.77e-07 | 25 |