FFCP PHASE1:Hg19::chr5:146833803..146833825,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1809 | |EntrezGene=1809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |HGNC=3015 | ||
|TSSclassifier=strong | |||
|UniProt=D6RF19 | |UniProt=D6RF19 | ||
|association_with_transcript=3bp_to_ENST00000512722_5end | |association_with_transcript=3bp_to_ENST00000512722_5end | ||
|cluster_id=chr5:146833803..146833825,- | |||
|coexpression_cluster_id=C1954 | |||
|description=CAGE_peak_14_at_DPYSL3_5end | |description=CAGE_peak_14_at_DPYSL3_5end | ||
|id=chr5:146833803..146833825,- | |id=chr5:146833803..146833825,- | ||
|ontology_enrichment_celltype=CL:0002319!1.83e-10!25;CL:0000133!7.75e-10!59;CL:0000055!1.52e-08!180;CL:0000047!1.12e-07!8 | |ontology_enrichment_celltype=CL:0002319!1.83e-10!25;CL:0000133!7.75e-10!59;CL:0000055!1.52e-08!180;CL:0000047!1.12e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.51e-10;25!CL:0000540;4.32e-10;6!CL:0000404;4.32e-10;6!CL:0002322;2.61e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.26e-12,8;CL:0002319,2.04e-10,25;CL:0000540,4.32e-10,6;CL:0000031,4.32e-10,6;CL:0000404,4.32e-10,6;CL:0000133,2.67e-09,59;CL:0002322,2.68e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000031;4.32e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.41e-21!94;UBERON:0001016!1.41e-21!94;UBERON:0001017!3.93e-21!82;UBERON:0005743!4.42e-21!86;UBERON:0004121!2.42e-17!169;UBERON:0000924!2.28e-16!173;UBERON:0006601!2.28e-16!173;UBERON:0003075!1.61e-15!86;UBERON:0007284!1.61e-15!86;UBERON:0002346!4.02e-14!90;UBERON:0000955!1.69e-13!69;UBERON:0006238!1.69e-13!69;UBERON:0001049!3.29e-13!57;UBERON:0005068!3.29e-13!57;UBERON:0006241!3.29e-13!57;UBERON:0007135!3.29e-13!57;UBERON:0000468!9.19e-13!659;UBERON:0000922!1.47e-11!612;UBERON:0000025!5.17e-11!194;UBERON:0002616!5.34e-11!59;UBERON:0007023!2.59e-10!115;UBERON:0000033!1.00e-09!123;UBERON:0000480!3.21e-09!626;UBERON:0000153!4.44e-09!129;UBERON:0007811!4.44e-09!129;UBERON:0000467!4.96e-09!625;UBERON:0002050!5.48e-09!605;UBERON:0005423!5.48e-09!605;UBERON:0000923!1.12e-08!604;UBERON:0005291!1.12e-08!604;UBERON:0006598!1.12e-08!604;UBERON:0002532!1.12e-08!604;UBERON:0004111!1.57e-08!241;UBERON:0003080!5.60e-08!42;UBERON:0000477!7.51e-08!286;UBERON:0003056!7.90e-08!61;UBERON:0002780!9.53e-08!41;UBERON:0001890!9.53e-08!41;UBERON:0006240!9.53e-08!41;UBERON:0002020!1.61e-07!34;UBERON:0003528!1.61e-07!34;UBERON:0000062!2.30e-07!511;UBERON:0000483!2.75e-07!309;UBERON:0000119!2.80e-07!312;UBERON:0001893!3.64e-07!34;UBERON:0003076!3.85e-07!15;UBERON:0003057!3.85e-07!15;UBERON:0002791!6.36e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.35e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.17e-16,81;UBERON:0001016,5.29e-15,89;UBERON:0004121,3.44e-12,171;UBERON:0000924,3.44e-12,171;UBERON:0006601,3.44e-12,171;UBERON:0010314,3.65e-12,132;UBERON:0003075,9.21e-11,82;UBERON:0007284,9.21e-11,82;UBERON:0002346,8.29e-10,86;UBERON:0001049,5.72e-09,56;UBERON:0005068,5.72e-09,56;UBERON:0006241,5.72e-09,56;UBERON:0007135,5.72e-09,56;UBERON:0000922,2.95e-08,592;UBERON:0000025,1.03e-07,192;UBERON:0010371,1.14e-07,104;UBERON:0002298,1.90e-07,6;UBERON:0003076,3.39e-07,15;UBERON:0003057,3.39e-07,15;UBERON:0000073,4.40e-07,53;UBERON:0002616,4.40e-07,53;UBERON:0000955,6.08e-07,68;UBERON:0006238,6.08e-07,68;UBERON:0002050,6.58e-07,564;UBERON:0000923,9.25e-07,560;UBERON:0010316,9.25e-07,560;UBERON:0005291,9.25e-07,560;UBERON:0006598,9.25e-07,560;UBERON:0010317,9.25e-07,560;UBERON:0002532,9.25e-07,560 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.845726424575827,2.00146596706261,1.78784437770915,4.36169262050184,0,0,0,0,0,1.31064823278103,0.527533956456907,0.37129905888014,0,0.672325146451775,1.80808358407193,0.730310090387373,1.95173119516203,0.984968464614303,0.816002764977012,2.82109249330279,2.0036519099174,2.46373965131192,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0,0,0.727752183563449,0,0.822335776043652,0.309706370895104,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.564727018627814,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.02290049474824,0.361439152384566,1.00267582127178,0.289693037921647,2.3858578411533,0.486634870302636,3.02511414925017,0.886917589850256,2.63504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0.596287222100115,0,0,0,1.25849830862972,0,0,0,0,0,0,0,0.24406205754817,0,1.62028389576352,0,0,0.112611480483322,0,0,0.366403487860815,0,0,0,3.47880366186723,0.379891534993739,0.662045904066094,0.573673241497627,1.41867352879343,1.68203280042692,1.06748995729705,1.48000529050296,0.933633106199299,1.0776853765575,0.326923806226917,0.302714855289863,0,0,0,0,0,0,0,0,0.61246251376468,0,0.309977343527296,1.18800285728205,0.989067717114227,0,0.718618141816238,0,0.250237039743928,0,0.877955241761676,0.919463387397059,0.901428353439581,1.13432183160021,0,0.213557388818567,0.423863802319124,0,0.515262646192195,0,0.18611685633159,0.168776332241266,0.194874010322397,0.252433774244115,0.276149695926898,0.484938170456436,0,0.806016785821122,0.169560592310488,0,0,0,4.26907971453584,7.95178609928912,4.18298194330266,3.21349270547648,2.52320850875628,9.85438869504741,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,2.94017422771084,0,0,0,0,0.245976877086227,0.514703430895577,0,0,0,0,0,1.03993478527958,0,1.73895607462615,2.58299127318808,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0,1.03417372606222,0,0,1.06375246633948,1.04007436911366,0.257207374262142,0,0,0,1.08524321078289,0.823240336780769,0,0,0,1.20575750823834,0.871533458600294,1.3996218765488,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,2.54094624222463,3.90419561572865,5.41302168944387,5.69555302136786,6.37938751653163,0,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0.157702415033935,0.35142424497814,0.300946099727719,0,0,0,0.553107505625109,0,0,0,0,0.215714200818617,0,0,0,0.907170879989041,0.744323423456331,0.920771839728375,0.841980283299221,0.128139149255701,1.02341449813341,1.60853921143608,7.42090332224955,0,0.532685175939381,0.0821271560138091,0.519254429183621,0.116210378459959,0,0,0,0.574072240823034,0.364182336013434,0.262248829918848,0.451199612907412,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,1.54227252690289,0.541892875087706,0.501689773854853,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.309123034943167,0.27470839445503,0.082509499920588,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0.534192213880424,0,0,0,0,0,0.31481234683064,0.6970372701606,0.616067160352178,1.59691809095107,0,1.11194531462352,2.00374841438788,0,0.316379424718726,0.571890581771475,0,0.855877976067841,0.318203247925937,0,0.179872457583315,0,0.353437207037059,0.404364963146632,0,1.26377536871694,0,0.731140468893853,1.05650146756755,0.136499911407986,0.424216295861138,0,0,0,0,0,0,1.21746226177622,0.30982349809975,0.845086807596724,0.286822704408103,0.491245205065606,1.78335525740625,0,1.47775344708365,1.31717957183961,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,1.43246690842614,1.18785872333055,2.45728561679386,0,0.844016498463076,0.445234820091624,0,0.211125408127993,1.9924798825107,1.10513566212459,0.251932747854276,0.102268682502155,0,0,0.0898683511473268,0,0,1.28236427328014,0,0,0.969332746095218,0.185536196323703,11.9768278800717,0,0,0.724999575434793,0,0,0,0,0,0.694499979733169,0,1.32656082487949,0,0.331737779793674,0.886642856860642,2.63262476584767,0,0,0.692552326534174,1.02547850262301,0,0,0,0.31900115973192,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0.432777279484182,0,0.265372693510018,1.83309043480088,0,0,0,1.14581926067151,2.40773294189637,1.40558667435203,0,0,0,2.36750641709634,0,15.609710843155,1.76922422959766,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,0.484945082442097,0,2.25980740780532,0,0,0.443175571691151,0,0.0801588202515337,1.49417096317547,1.19885765749278,0,0,0.171594997861965,0,0,0,3.94122197613481,3.34729108199466,0.101998217636322,0.577901179803038,0,1.23214841002794,0,4.29765441419957,0,4.18923601908381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| ||
|short_description=p14@DPYSL3 | |short_description=p14@DPYSL3 | ||
}} | }} |
Latest revision as of 22:10, 15 September 2015
Short description: | p14@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_DPYSL3_5end |
Coexpression cluster: | C1954_occipital_parietal_temporal_duodenum_brain_Neurons_medulloblastoma |
Association with transcript: | 3bp_to_ENST00000512722_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | D6RF19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.26e-12 | 8 |
neural cell | 2.04e-10 | 25 |
neuron | 4.32e-10 | 6 |
neuroblast | 4.32e-10 | 6 |
electrically signaling cell | 4.32e-10 | 6 |
neurectodermal cell | 2.67e-09 | 59 |
embryonic stem cell | 2.68e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.17e-16 | 81 |
nervous system | 5.29e-15 | 89 |
ectoderm-derived structure | 3.44e-12 | 171 |
ectoderm | 3.44e-12 | 171 |
presumptive ectoderm | 3.44e-12 | 171 |
structure with developmental contribution from neural crest | 3.65e-12 | 132 |
neural plate | 9.21e-11 | 82 |
presumptive neural plate | 9.21e-11 | 82 |
neurectoderm | 8.29e-10 | 86 |
neural tube | 5.72e-09 | 56 |
neural rod | 5.72e-09 | 56 |
future spinal cord | 5.72e-09 | 56 |
neural keel | 5.72e-09 | 56 |
embryo | 2.95e-08 | 592 |
tube | 1.03e-07 | 192 |
ecto-epithelium | 1.14e-07 | 104 |
brainstem | 1.90e-07 | 6 |
posterior neural tube | 3.39e-07 | 15 |
chordal neural plate | 3.39e-07 | 15 |
regional part of nervous system | 4.40e-07 | 53 |
regional part of brain | 4.40e-07 | 53 |
brain | 6.08e-07 | 68 |
future brain | 6.08e-07 | 68 |
embryonic structure | 6.58e-07 | 564 |
germ layer | 9.25e-07 | 560 |
germ layer / neural crest | 9.25e-07 | 560 |
embryonic tissue | 9.25e-07 | 560 |
presumptive structure | 9.25e-07 | 560 |
germ layer / neural crest derived structure | 9.25e-07 | 560 |
epiblast (generic) | 9.25e-07 | 560 |