FFCP PHASE1:Hg19::chr6:163910016..163910030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:163910016..163910030,+ | |||
|coexpression_cluster_id=C1279 | |||
|description=CAGE_peak_at_chr6:163910016..163910030,+ | |description=CAGE_peak_at_chr6:163910016..163910030,+ | ||
|id=chr6:163910016..163910030,+ | |id=chr6:163910016..163910030,+ | ||
|ontology_enrichment_celltype=CL:0000766!6.82e-20!76;CL:0002057!2.70e-18!42;CL:0002009!1.56e-17!65;CL:0000557!6.54e-17!71;CL:0000738!1.44e-16!140;CL:0002194!1.72e-16!63;CL:0000576!1.72e-16!63;CL:0000040!1.72e-16!63;CL:0000559!1.72e-16!63;CL:0000860!2.14e-16!45;CL:0000839!2.63e-15!70;CL:0000763!7.70e-15!112;CL:0000049!7.70e-15!112;CL:0000037!2.19e-13!172;CL:0000566!2.19e-13!172;CL:0002087!1.26e-12!119;CL:0000988!1.46e-12!182;CL:0002032!3.16e-12!165;CL:0000837!3.16e-12!165;CL:0002031!4.14e-12!124 | |ontology_enrichment_celltype=CL:0000766!6.82e-20!76;CL:0002057!2.70e-18!42;CL:0002009!1.56e-17!65;CL:0000557!6.54e-17!71;CL:0000738!1.44e-16!140;CL:0002194!1.72e-16!63;CL:0000576!1.72e-16!63;CL:0000040!1.72e-16!63;CL:0000559!1.72e-16!63;CL:0000860!2.14e-16!45;CL:0000839!2.63e-15!70;CL:0000763!7.70e-15!112;CL:0000049!7.70e-15!112;CL:0000037!2.19e-13!172;CL:0000566!2.19e-13!172;CL:0002087!1.26e-12!119;CL:0000988!1.46e-12!182;CL:0002032!3.16e-12!165;CL:0000837!3.16e-12!165;CL:0002031!4.14e-12!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-15;33!CL:0002057;2.63e-15;33!CL:0000473;1.33e-13;39!CL:0000234;1.33e-13;39!CL:0000576;2.63e-12;48!CL:0000766;1.70e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.25e-21,72;CL:0002009,1.21e-20,61;CL:0000557,2.93e-19,67;CL:0002194,1.44e-18,59;CL:0000576,1.44e-18,59;CL:0000040,1.44e-18,59;CL:0000559,1.44e-18,59;CL:0000738,1.97e-18,136;CL:0000473,2.04e-18,48;CL:0000234,2.04e-18,48;CL:0000860,3.65e-18,42;CL:0002057,3.65e-18,42;CL:0000839,6.60e-17,66;CL:0000763,1.22e-14,108;CL:0000049,1.22e-14,108;CL:0002087,2.30e-14,115;CL:0000037,8.69e-14,168;CL:0002031,4.20e-13,120;CL:0000988,2.12e-12,177;CL:0002032,9.75e-12,161;CL:0000837,9.75e-12,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.08e-17!57;UBERON:0005068!1.08e-17!57;UBERON:0006241!1.08e-17!57;UBERON:0007135!1.08e-17!57;UBERON:0002616!4.52e-15!59;UBERON:0002371!1.77e-14!80;UBERON:0001474!2.41e-14!86;UBERON:0000955!2.62e-14!69;UBERON:0006238!2.62e-14!69;UBERON:0003080!9.95e-14!42;UBERON:0002020!1.01e-13!34;UBERON:0003528!1.01e-13!34;UBERON:0007023!1.38e-13!115;UBERON:0001893!2.17e-13!34;UBERON:0002390!2.41e-13!102;UBERON:0003061!2.41e-13!102;UBERON:0001017!2.46e-13!82;UBERON:0002780!3.16e-13!41;UBERON:0001890!3.16e-13!41;UBERON:0006240!3.16e-13!41;UBERON:0002791!5.03e-13!33;UBERON:0002346!1.89e-12!90;UBERON:0001869!4.31e-12!32;UBERON:0005743!4.47e-12!86;UBERON:0003075!7.43e-12!86;UBERON:0007284!7.43e-12!86;UBERON:0002193!7.45e-12!112;UBERON:0002405!1.88e-11!115;UBERON:0000073!5.70e-11!94;UBERON:0001016!5.70e-11!94;UBERON:0004765!6.02e-11!101;UBERON:0001434!6.02e-11!101;UBERON:0000956!5.42e-10!25;UBERON:0000203!5.42e-10!25;UBERON:0002619!1.25e-08!22;UBERON:0003056!1.11e-07!61;UBERON:0001950!2.07e-07!20;UBERON:0000033!4.10e-07!123;UBERON:0000153!6.31e-07!129;UBERON:0007811!6.31e-07!129;UBERON:0002298!9.04e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.71e-15;41!UBERON:0001890;7.71e-15;41!UBERON:0002791;3.10e-14;32!UBERON:0003528;3.15e-14;34!UBERON:0002020;3.15e-14;34!UBERON:0000073;1.58e-13;53!UBERON:0002616;1.58e-13;53!UBERON:0001893;3.60e-13;34!UBERON:0001869;1.06e-12;32!UBERON:0000956;4.16e-12;25!UBERON:0000203;4.16e-12;25!UBERON:0002298;1.76e-11;6!UBERON:0002619;1.73e-10;22!UBERON:0001950;4.16e-08;20!UBERON:0000125;1.28e-07;9!UBERON:0002308;1.28e-07;9!UBERON:0002420;4.05e-07;9!UBERON:0007245;4.05e-07;9!UBERON:0010009;4.05e-07;9!UBERON:0010011;4.05e-07;9!UBERON:0000454;4.05e-07;9 | |||
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| ||
|short_description=p@chr6:163910016..163910030,+ | |short_description=p@chr6:163910016..163910030,+ | ||
}} | }} |
Latest revision as of 21:57, 30 July 2015
Short description: | p@chr6:163910016..163910030, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:163910016..163910030, + |
Coexpression cluster: | C1279_CD14_Neutrophils_substantia_Eosinophils_optic_globus_thalamus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.25e-21 | 72 |
macrophage dendritic cell progenitor | 1.21e-20 | 61 |
granulocyte monocyte progenitor cell | 2.93e-19 | 67 |
monopoietic cell | 1.44e-18 | 59 |
monocyte | 1.44e-18 | 59 |
monoblast | 1.44e-18 | 59 |
promonocyte | 1.44e-18 | 59 |
leukocyte | 1.97e-18 | 136 |
defensive cell | 2.04e-18 | 48 |
phagocyte | 2.04e-18 | 48 |
classical monocyte | 3.65e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.65e-18 | 42 |
myeloid lineage restricted progenitor cell | 6.60e-17 | 66 |
myeloid cell | 1.22e-14 | 108 |
common myeloid progenitor | 1.22e-14 | 108 |
nongranular leukocyte | 2.30e-14 | 115 |
hematopoietic stem cell | 8.69e-14 | 168 |
hematopoietic lineage restricted progenitor cell | 4.20e-13 | 120 |
hematopoietic cell | 2.12e-12 | 177 |
hematopoietic oligopotent progenitor cell | 9.75e-12 | 161 |
hematopoietic multipotent progenitor cell | 9.75e-12 | 161 |