FFCP PHASE1:Hg19::chr13:95364761..95364780,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:95364761..95364780,-
|short_description=p2@SOX21
|description=CAGE_peak_2_at_SOX21_5end
|association_with_transcript=-372bp_to_ENST00000376945,NM_007084,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11166 | |EntrezGene=11166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11197 | |HGNC=11197 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y651 | |UniProt=Q9Y651 | ||
|association_with_transcript=-372bp_to_ENST00000376945,NM_007084,uc001vma.2_5end | |||
|cluster_id=chr13:95364761..95364780,- | |||
|coexpression_cluster_id=C2273 | |||
|description=CAGE_peak_2_at_SOX21_5end | |||
|id=chr13:95364761..95364780,- | |||
|ontology_enrichment_celltype=CL:0002319!6.02e-11!25;CL:0002322!2.13e-10!5;CL:0000047!5.80e-09!8;CL:0002605!1.84e-07!3;CL:0000128!3.44e-07!7;CL:0000126!3.44e-07!7;CL:0000127!3.44e-07!7;CL:0002453!3.44e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.10e-20;5!CL:0002605;7.40e-14;3!CL:0002319;1.15e-13;25!CL:0000128;6.65e-10;7!CL:0000126;6.65e-10;7!CL:0000127;6.65e-10;7!CL:0000047;9.26e-10;2!CL:0000540;6.83e-07;6!CL:0000404;6.83e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.04e-20,5;CL:0002605,7.61e-14,3;CL:0002319,1.31e-13,25;CL:0000047,2.79e-13,8;CL:0000128,7.39e-10,7;CL:0000126,7.39e-10,7;CL:0000127,7.39e-10,7;CL:0002453,7.39e-10,7;CL:0000133,1.57e-08,59;CL:0000540,6.85e-07,6;CL:0000031,6.85e-07,6;CL:0000404,6.85e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;6.83e-07;6!CL:0000133;9.89e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.30e-65!82;UBERON:0005743!4.02e-61!86;UBERON:0001049!2.74e-58!57;UBERON:0005068!2.74e-58!57;UBERON:0006241!2.74e-58!57;UBERON:0007135!2.74e-58!57;UBERON:0000073!1.02e-53!94;UBERON:0001016!1.02e-53!94;UBERON:0000955!1.05e-51!69;UBERON:0006238!1.05e-51!69;UBERON:0002616!8.88e-48!59;UBERON:0001893!6.20e-46!34;UBERON:0002020!8.74e-46!34;UBERON:0003528!8.74e-46!34;UBERON:0002780!6.61e-45!41;UBERON:0001890!6.61e-45!41;UBERON:0006240!6.61e-45!41;UBERON:0002791!2.82e-44!33;UBERON:0003080!1.35e-43!42;UBERON:0001869!1.01e-42!32;UBERON:0003075!3.74e-39!86;UBERON:0007284!3.74e-39!86;UBERON:0002346!9.43e-37!90;UBERON:0000153!6.95e-35!129;UBERON:0007811!6.95e-35!129;UBERON:0000033!1.41e-34!123;UBERON:0004121!4.85e-34!169;UBERON:0000924!8.26e-33!173;UBERON:0006601!8.26e-33!173;UBERON:0000956!2.10e-31!25;UBERON:0000203!2.10e-31!25;UBERON:0003056!2.08e-30!61;UBERON:0002619!7.19e-26!22;UBERON:0001950!1.28e-25!20;UBERON:0007023!1.24e-23!115;UBERON:0002308!7.63e-16!9;UBERON:0000125!7.63e-16!9;UBERON:0002420!1.11e-15!9;UBERON:0007245!1.11e-15!9;UBERON:0010009!1.11e-15!9;UBERON:0010011!1.11e-15!9;UBERON:0000454!1.11e-15!9;UBERON:0003076!3.15e-15!15;UBERON:0003057!3.15e-15!15;UBERON:0009663!1.13e-12!7;UBERON:0000064!5.53e-12!219;UBERON:0000025!7.12e-11!194;UBERON:0004733!9.04e-11!12;UBERON:0002028!9.04e-11!12;UBERON:0007277!9.04e-11!12;UBERON:0001871!1.14e-10!7;UBERON:0002298!1.33e-10!8;UBERON:0002021!4.06e-10!5;UBERON:0004111!6.80e-10!241;UBERON:0004732!8.60e-10!13;UBERON:0000475!1.83e-09!365;UBERON:0000369!7.75e-08!4;UBERON:0002435!7.75e-08!4;UBERON:0000204!7.75e-08!4;UBERON:0010082!7.75e-08!4;UBERON:0000200!1.05e-07!6;UBERON:0000477!1.54e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;7.40e-47;32!UBERON:0001893;2.41e-45;34!UBERON:0002791;4.95e-43;32!UBERON:0002780;9.32e-43;41!UBERON:0001890;9.32e-43;41!UBERON:0003528;1.58e-41;34!UBERON:0002020;1.58e-41;34!UBERON:0000956;7.18e-40;25!UBERON:0000203;7.18e-40;25!UBERON:0000073;6.88e-30;53!UBERON:0002616;6.88e-30;53!UBERON:0002619;9.18e-30;22!UBERON:0001950;2.82e-28;20!UBERON:0001017;3.85e-26;75!UBERON:0000955;1.95e-21;68!UBERON:0001016;2.92e-18;83!UBERON:0002021;5.18e-13;5!UBERON:0001872;1.69e-12;5!UBERON:0000125;1.00e-10;9!UBERON:0002308;1.00e-10;9!UBERON:0009663;3.28e-09;7!UBERON:0001875;4.11e-09;2!UBERON:0006514;4.11e-09;2!UBERON:0002420;3.58e-07;9!UBERON:0007245;3.58e-07;9!UBERON:0010009;3.58e-07;9!UBERON:0010011;3.58e-07;9!UBERON:0000454;3.58e-07;9!UBERON:0011216;6.60e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.34e-61,81;UBERON:0001049,5.50e-55,56;UBERON:0005068,5.50e-55,56;UBERON:0006241,5.50e-55,56;UBERON:0007135,5.50e-55,56;UBERON:0001016,3.52e-54,89;UBERON:0001893,1.41e-53,34;UBERON:0002780,2.83e-52,41;UBERON:0001890,2.83e-52,41;UBERON:0003080,2.83e-52,41;UBERON:0006240,2.83e-52,41;UBERON:0001869,4.73e-52,32;UBERON:0000073,3.13e-50,53;UBERON:0002616,3.13e-50,53;UBERON:0003528,7.20e-49,34;UBERON:0002020,7.20e-49,34;UBERON:0002791,2.56e-47,32;UBERON:0000955,1.13e-46,68;UBERON:0006238,1.13e-46,68;UBERON:0000956,7.42e-40,25;UBERON:0000203,7.42e-40,25;UBERON:0003075,4.05e-38,82;UBERON:0007284,4.05e-38,82;UBERON:0003056,2.40e-36,61;UBERON:0002346,5.07e-36,86;UBERON:0010371,1.12e-30,104;UBERON:0002619,9.31e-30,22;UBERON:0001950,3.61e-28,20;UBERON:0004121,9.12e-28,171;UBERON:0000924,9.12e-28,171;UBERON:0006601,9.12e-28,171;UBERON:0010314,1.24e-22,132;UBERON:0011216,5.73e-18,223;UBERON:0007023,3.11e-15,114;UBERON:0002021,5.55e-13,5;UBERON:0001872,1.33e-12,5;UBERON:0000025,3.35e-11,192;UBERON:0000125,1.50e-10,9;UBERON:0002308,1.50e-10,9;UBERON:0009663,5.55e-09,7;UBERON:0001875,6.96e-09,2;UBERON:0006514,6.96e-09,2;UBERON:0004111,1.23e-07,240;UBERON:0002420,5.33e-07,9;UBERON:0007245,5.33e-07,9;UBERON:0010009,5.33e-07,9;UBERON:0010011,5.33e-07,9;UBERON:0000454,5.33e-07,9 | |||
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| ||
|short_description=p2@SOX21 | |||
}} | }} |
Latest revision as of 05:39, 18 September 2015
Short description: | p2@SOX21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SOX21_5end |
Coexpression cluster: | C2273_Neural_Astrocyte_small_teratocarcinoma_testicular_brain_Neurons |
Association with transcript: | -372bp_to_ENST00000376945, NM_007084, uc001vma.2_5end |
EntrezGene: | SOX21 |
HGNC: | 11197 |
UniProt: | Q9Y651 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.04e-20 | 5 |
astrocyte of the cerebral cortex | 7.61e-14 | 3 |
neural cell | 1.31e-13 | 25 |
neuronal stem cell | 2.79e-13 | 8 |
oligodendrocyte | 7.39e-10 | 7 |
macroglial cell | 7.39e-10 | 7 |
astrocyte | 7.39e-10 | 7 |
oligodendrocyte precursor cell | 7.39e-10 | 7 |
neurectodermal cell | 1.57e-08 | 59 |
neuron | 6.85e-07 | 6 |
neuroblast | 6.85e-07 | 6 |
electrically signaling cell | 6.85e-07 | 6 |